BLASTX nr result

ID: Lithospermum22_contig00034467 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00034467
         (519 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324910.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08
ref|NP_975003.1| Ribosomal RNA adenine dimethylase family protei...    59   4e-07
ref|NP_201437.2| Ribosomal RNA adenine dimethylase family protei...    59   4e-07

>ref|XP_002324910.1| predicted protein [Populus trichocarpa] gi|222866344|gb|EEF03475.1|
           predicted protein [Populus trichocarpa]
          Length = 386

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 42/126 (33%), Positives = 59/126 (46%), Gaps = 14/126 (11%)
 Frame = +1

Query: 1   KTLGATFXXXXXXXXXXXXXXXX----EDYEDNNVNCLGNDGISDVDEEEVGTGITS--- 159
           KTLGATF                    E+   N   C  +DG  D +EE  G    S   
Sbjct: 262 KTLGATFKQKKKVIELFRLSKMTSSNGEEINRNQYVCADDDG--DNEEESDGEECHSSSC 319

Query: 160 -------FREKLIDILRTSSFEDKRPSKXXXXXXXXXXXXVNQAGIYFHDKTMLKNASSY 318
                  F+EK+I++L+  SFEDKRPSK            +NQ+GIYFH++T  +N  + 
Sbjct: 320 ADRELLLFKEKIIEVLKAGSFEDKRPSKLCNEELLYLLSMLNQSGIYFHEQTKPRNVGNV 379

Query: 319 VYSAAF 336
            ++AA+
Sbjct: 380 AFAAAY 385


>ref|NP_975003.1| Ribosomal RNA adenine dimethylase family protein [Arabidopsis
           thaliana] gi|10177517|dbj|BAB10912.1| dimethyladenosine
           transferase-like protein [Arabidopsis thaliana]
           gi|332010821|gb|AED98204.1| Ribosomal RNA adenine
           dimethylase family protein [Arabidopsis thaliana]
          Length = 380

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 37/107 (34%), Positives = 51/107 (47%), Gaps = 6/107 (5%)
 Frame = +1

Query: 1   KTLGATFXXXXXXXXXXXXXXXXEDYEDNNVNCLGNDGISDVDEEE------VGTGITSF 162
           KTLG+ F                       +N  G D  SDV+E+       + T  + F
Sbjct: 269 KTLGSMFRQKKKVMELQSLSAGRHGSNVEVMNQTGGDSDSDVEEDGKDDLLCLDTDASMF 328

Query: 163 REKLIDILRTSSFEDKRPSKXXXXXXXXXXXXVNQAGIYFHDKTMLK 303
           +E++I+ILRT+ FE+KRPSK             NQAGI+FHD T L+
Sbjct: 329 KERVIEILRTNGFEEKRPSKLSHRELLHLLSLFNQAGIFFHDITSLQ 375


>ref|NP_201437.2| Ribosomal RNA adenine dimethylase family protein [Arabidopsis
           thaliana] gi|21539437|gb|AAM53271.1| dimethyladenosine
           transferase-like protein [Arabidopsis thaliana]
           gi|31711838|gb|AAP68275.1| At5g66360 [Arabidopsis
           thaliana] gi|332010820|gb|AED98203.1| Ribosomal RNA
           adenine dimethylase family protein [Arabidopsis
           thaliana]
          Length = 352

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 37/107 (34%), Positives = 51/107 (47%), Gaps = 6/107 (5%)
 Frame = +1

Query: 1   KTLGATFXXXXXXXXXXXXXXXXEDYEDNNVNCLGNDGISDVDEEE------VGTGITSF 162
           KTLG+ F                       +N  G D  SDV+E+       + T  + F
Sbjct: 241 KTLGSMFRQKKKVMELQSLSAGRHGSNVEVMNQTGGDSDSDVEEDGKDDLLCLDTDASMF 300

Query: 163 REKLIDILRTSSFEDKRPSKXXXXXXXXXXXXVNQAGIYFHDKTMLK 303
           +E++I+ILRT+ FE+KRPSK             NQAGI+FHD T L+
Sbjct: 301 KERVIEILRTNGFEEKRPSKLSHRELLHLLSLFNQAGIFFHDITSLQ 347


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