BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00034462
         (424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...    67   6e-11
emb|CAB75484.1| putative protein [Arabidopsis thaliana]                65   5e-10
ref|XP_003609231.1| Cytosine-specific methyltransferase [Medicag...    67   2e-09
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...    59   2e-09
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...    54   4e-09

>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1374

 Score = 67.4 bits (163), Expect(2) = 6e-11
 Identities = 26/71 (36%), Positives = 42/71 (59%)
 Frame = -1

Query: 235  IRKNLWSLKIPPRVKYFL*RCLHNCLPTKDKLARKGIITKRACLLCSHHNENLIHLLLTC 56
            I + +W L +PP++ +FL RC++NCL     LA + +  +++C+ C  H E + HLL  C
Sbjct: 1050 IFQQIWKLDVPPKIHHFLWRCVNNCLSVASNLAYRHLAREKSCVRCPSHGETVNHLLFKC 1109

Query: 55   PFSSRLWFSMP 23
            PF+   W   P
Sbjct: 1110 PFARLTWAISP 1120



 Score = 24.3 bits (51), Expect(2) = 6e-11
 Identities = 13/50 (26%), Positives = 24/50 (48%)
 Frame = -2

Query: 417  QNILTIPLSGQHIWDKLV*HHTKCGNYLISYGYKSTRELKRNGDLRSKPQ 268
            +NIL +   G+   D+    +++ G+Y +  GY    E+      R+ PQ
Sbjct: 994  ENILALRPGGKETRDRFTWEYSRSGHYSVKSGYWVMTEIINQ---RNNPQ 1040


>emb|CAB75484.1| putative protein [Arabidopsis thaliana]
          Length = 851

 Score = 65.5 bits (158), Expect(2) = 5e-10
 Identities = 27/68 (39%), Positives = 41/68 (60%)
 Frame = -1

Query: 238 DIRKNLWSLKIPPRVKYFL*RCLHNCLPTKDKLARKGIITKRACLLCSHHNENLIHLLLT 59
           D++  +W+L I P++K+FL R L   LPT D+L  +G+     C  C   NE++ H L T
Sbjct: 662 DLKTKIWNLPIMPKLKHFLWRILSKALPTTDRLTTRGMRIDPGCPRCRRENESINHALFT 721

Query: 58  CPFSSRLW 35
           CPF++  W
Sbjct: 722 CPFATMAW 729



 Score = 23.1 bits (48), Expect(2) = 5e-10
 Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = -2

Query: 423 DAQNILTIPLSGQHIWDKLV*HHTKCGNYLISYGY-KSTRELKRNGDLRSKPQG 265
           D   I  I LS +   D+L+  +   G+Y +  GY  ST +        +KP G
Sbjct: 606 DHDYIKRIYLSTRSKTDRLIWSYNSTGDYTVRSGYWLSTHDPSNTIPTMAKPHG 659


>ref|XP_003609231.1| Cytosine-specific methyltransferase [Medicago truncatula]
           gi|355510286|gb|AES91428.1| Cytosine-specific
           methyltransferase [Medicago truncatula]
          Length = 569

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 27/66 (40%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
 Frame = -1

Query: 229 KNLWSLKIPPRVKYFL*RCLHNCLPTKDKLARKGIITKRACLLCSHHN-ENLIHLLLTCP 53
           K +WSL +PP++K+F  R LHNCLPT+  L  +G+  + AC+ C++++ E+ +HL + C 
Sbjct: 316 KLIWSLHVPPKIKHFFWRLLHNCLPTRSNLQGRGVPCQSACVTCNNNDLEDEMHLFMHCK 375

Query: 52  FSSRLW 35
           F+   W
Sbjct: 376 FAIDCW 381


>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score = 58.9 bits (141), Expect(2) = 2e-09
 Identities = 28/80 (35%), Positives = 43/80 (53%)
 Frame = -1

Query: 241  WDIRKNLWSLKIPPRVKYFL*RCLHNCLPTKDKLARKGIITKRACLLCSHHNENLIHLLL 62
            W+I   LWSL + P+V++FL R   + LP +  L R+ +I +  C  C+  +E   HL  
Sbjct: 1039 WNI---LWSLNVSPKVRHFLWRACTSSLPVRKVLQRRHLIDEAGCPCCAREDETQFHLFY 1095

Query: 61   TCPFSSRLWFSMPWCLLTSG 2
             CP S +LW  +   +L  G
Sbjct: 1096 RCPMSLKLWEELGSYILLPG 1115



 Score = 27.3 bits (59), Expect(2) = 2e-09
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -2

Query: 423  DAQNILTIPLSGQHIWDKLV*HHTKCGNYLISYGY 319
            D Q IL IPLS + + D+L   ++K G Y +   Y
Sbjct: 990  DQQCILAIPLSTRCLQDELTWAYSKDGTYSVKTAY 1024


>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score = 54.3 bits (129), Expect(2) = 4e-09
 Identities = 18/67 (26%), Positives = 40/67 (59%)
 Frame = -1

Query: 235  IRKNLWSLKIPPRVKYFL*RCLHNCLPTKDKLARKGIITKRACLLCSHHNENLIHLLLTC 56
            ++  +W ++ PP++++FL + L  C+P  + L ++GI+  + C+ C    E++ H L  C
Sbjct: 824  LKAYIWKVQCPPKLRHFLWQILSGCVPVSENLRKRGILCDKGCVSCGASEESINHTLFQC 883

Query: 55   PFSSRLW 35
              + ++W
Sbjct: 884  HPARQIW 890



 Score = 31.2 bits (69), Expect(2) = 4e-09
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -2

Query: 423 DAQNILTIPLSGQHIWDKLV*HHTKCGNYLISYGYKSTR 307
           D   I  +P+   ++ D L  H TK GNY +  GY + R
Sbjct: 769 DVPLISALPIGNPNMEDTLGWHFTKAGNYTVKSGYHTAR 807