BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00034454
         (484 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514998.1| alpha DNA polymerase, putative [Ricinus comm...   131   6e-29
ref|XP_002265789.1| PREDICTED: DNA polymerase alpha subunit B [V...   129   2e-28
ref|XP_002888612.1| DNA polymerase alpha subunit B family [Arabi...   116   2e-24
gb|AAG52305.1|AC011020_12 putative DNA polymerase alpha subunit ...   114   6e-24
gb|AAG28895.1|AC008113_11 F12A21.24 [Arabidopsis thaliana]            114   6e-24

>ref|XP_002514998.1| alpha DNA polymerase, putative [Ricinus communis]
           gi|223546049|gb|EEF47552.1| alpha DNA polymerase,
           putative [Ricinus communis]
          Length = 621

 Score =  131 bits (329), Expect = 6e-29
 Identities = 68/142 (47%), Positives = 93/142 (65%), Gaps = 1/142 (0%)
 Frame = -1

Query: 484 QKDVLEKKEPGLHLYSH-DVSMILNDDYEDSKEGILTTPTSKIEKASHEQSDSGLKSNGS 308
           QK+ + K+EP LH+YS  DV MILND+ ED KE +  TPT + +K + E  DS +KS G+
Sbjct: 75  QKEAIIKEEPDLHIYSSKDVDMILNDEGEDLKEEVPGTPTDESQKLNSEPFDSIIKSTGN 134

Query: 307 IFASAKPLDSVTPFGVRKNRFAVQFTLNKTATSEPMNVESRTQTSEDDIIKRPQPTSRCS 128
            ++S K    VTPFG R ++F V+F +N    +E  + E   +  EDDIIKR QP  +CS
Sbjct: 135 GYSSGKRSKHVTPFGRRTDKFVVKFNINNLPDTENGDNEHVRENMEDDIIKRVQPRKKCS 194

Query: 127 LEINKSHLEPGCRFMYDRVEDK 62
             ++ S  EPGCRFMYDR+ED+
Sbjct: 195 FVVHGSGPEPGCRFMYDRIEDR 216


>ref|XP_002265789.1| PREDICTED: DNA polymerase alpha subunit B [Vitis vinifera]
           gi|297738371|emb|CBI27572.3| unnamed protein product
           [Vitis vinifera]
          Length = 623

 Score =  129 bits (325), Expect = 2e-28
 Identities = 64/142 (45%), Positives = 97/142 (68%), Gaps = 1/142 (0%)
 Frame = -1

Query: 484 QKDVLEKKEPGLHLYS-HDVSMILNDDYEDSKEGILTTPTSKIEKASHEQSDSGLKSNGS 308
           QK+ + K+EP LH+YS +DV MIL+D++E+ KE IL TP+ +  +   +  DS  ++NG+
Sbjct: 76  QKEAVIKEEPHLHIYSSNDVDMILSDEHEEIKEDILGTPSDRSGRHHADPFDSAQRTNGN 135

Query: 307 IFASAKPLDSVTPFGVRKNRFAVQFTLNKTATSEPMNVESRTQTSEDDIIKRPQPTSRCS 128
             +  KP + VTPFG R ++F VQ T+N   ++E    E++ +  +DDII+R QP+ RCS
Sbjct: 136 SSSYGKPSNHVTPFGKRTSKFVVQLTVNNPPSAENGKNENKFENVDDDIIRRVQPSKRCS 195

Query: 127 LEINKSHLEPGCRFMYDRVEDK 62
           L ++ S   PGCRFMYDR+ED+
Sbjct: 196 LLVHGSRPGPGCRFMYDRIEDR 217


>ref|XP_002888612.1| DNA polymerase alpha subunit B family [Arabidopsis lyrata subsp.
           lyrata] gi|297334453|gb|EFH64871.1| DNA polymerase alpha
           subunit B family [Arabidopsis lyrata subsp. lyrata]
          Length = 619

 Score =  116 bits (290), Expect = 2e-24
 Identities = 63/142 (44%), Positives = 93/142 (65%), Gaps = 1/142 (0%)
 Frame = -1

Query: 484 QKDVLEKKEPGLHLYSH-DVSMILNDDYEDSKEGILTTPTSKIEKASHEQSDSGLKSNGS 308
           ++ ++  +E GLHLYS+ DV M+L+   ED++E I+TTPT++ ++   +  DS  +S   
Sbjct: 77  KESIMRAEEAGLHLYSNRDVDMLLDGVQEDTEE-IVTTPTNESQRLHPDPFDSISRSRDY 135

Query: 307 IFASAKPLDSVTPFGVRKNRFAVQFTLNKTATSEPMNVESRTQTSEDDIIKRPQPTSRCS 128
            +++ K +  VTPFG R  +F V+F +   A +E  N  +  + SEDDIIKR Q + RCS
Sbjct: 136 GYSTGKSVGHVTPFGSRIEKFVVKFNVGNVAPAENGN-SNEIENSEDDIIKRVQTSQRCS 194

Query: 127 LEINKSHLEPGCRFMYDRVEDK 62
           LE+N S  EPGCRFMYDR ED+
Sbjct: 195 LEVNGSGPEPGCRFMYDRTEDR 216


>gb|AAG52305.1|AC011020_12 putative DNA polymerase alpha subunit [Arabidopsis thaliana]
          Length = 620

 Score =  114 bits (286), Expect = 6e-24
 Identities = 61/142 (42%), Positives = 90/142 (63%), Gaps = 1/142 (0%)
 Frame = -1

Query: 484 QKDVLEKKEPGLHLYSH-DVSMILNDDYEDSKEGILTTPTSKIEKASHEQSDSGLKSNGS 308
           ++ ++  +E GLHLYS+ DV M+L+   ED++E I+TTPT+K ++   +  DS  +S   
Sbjct: 77  KESIMRVEEAGLHLYSNRDVDMLLDGVQEDTEE-IVTTPTNKSQRLHPDPFDSISRSRDY 135

Query: 307 IFASAKPLDSVTPFGVRKNRFAVQFTLNKTATSEPMNVESRTQTSEDDIIKRPQPTSRCS 128
            +++ K +  VTPFG R  +F V+F +   A        +  + SEDDIIKR Q + RCS
Sbjct: 136 GYSTGKSVGHVTPFGSRIEKFVVKFNVGNVAAHAENGNNNDVENSEDDIIKRVQTSQRCS 195

Query: 127 LEINKSHLEPGCRFMYDRVEDK 62
           L++N S  EPGCRFMYDR ED+
Sbjct: 196 LKVNGSGPEPGCRFMYDRTEDR 217


>gb|AAG28895.1|AC008113_11 F12A21.24 [Arabidopsis thaliana]
          Length = 803

 Score =  114 bits (286), Expect = 6e-24
 Identities = 61/142 (42%), Positives = 90/142 (63%), Gaps = 1/142 (0%)
 Frame = -1

Query: 484 QKDVLEKKEPGLHLYSH-DVSMILNDDYEDSKEGILTTPTSKIEKASHEQSDSGLKSNGS 308
           ++ ++  +E GLHLYS+ DV M+L+   ED++E I+TTPT+K ++   +  DS  +S   
Sbjct: 77  KESIMRVEEAGLHLYSNRDVDMLLDGVQEDTEE-IVTTPTNKSQRLHPDPFDSISRSRDY 135

Query: 307 IFASAKPLDSVTPFGVRKNRFAVQFTLNKTATSEPMNVESRTQTSEDDIIKRPQPTSRCS 128
            +++ K +  VTPFG R  +F V+F +   A        +  + SEDDIIKR Q + RCS
Sbjct: 136 GYSTGKSVGHVTPFGSRIEKFVVKFNVGNVAAHAENGNNNDVENSEDDIIKRVQTSQRCS 195

Query: 127 LEINKSHLEPGCRFMYDRVEDK 62
           L++N S  EPGCRFMYDR ED+
Sbjct: 196 LKVNGSGPEPGCRFMYDRTEDR 217