BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00034416
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADB85430.1| putative retrotransposon protein [Phyllostachys e...   143   1e-32
gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Jap...   137   7e-31
gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subc...   137   9e-31
dbj|BAA22288.1| polyprotein [Oryza australiensis]                     137   1e-30
gb|AAX94813.1| retrotransposon protein, putative, Ty1-copia sub-...   136   2e-30

>gb|ADB85430.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 896

 Score =  143 bits (361), Expect = 1e-32
 Identities = 66/85 (77%), Positives = 74/85 (87%)
 Frame = -2

Query: 257 HGVQLSRAHCPTTSAEMNRMKDVPYASAIGSIMYAMLCTRPDVSYALSVTSRYQANPGES 78
           HG+ LS+  CPTT+ E ++M D+PYASAIGSIMYAM+CTRPDVSYALSVTSRYQA+P E 
Sbjct: 650 HGINLSKNQCPTTTDERDKMSDIPYASAIGSIMYAMICTRPDVSYALSVTSRYQADPSEG 709

Query: 77  HWIAVKCILKYLRRTKDAFLVYGGD 3
           HW AVK ILKYLRRTKD FLVYGGD
Sbjct: 710 HWTAVKNILKYLRRTKDVFLVYGGD 734


>gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Japonica Group]
            gi|62701883|gb|AAX92956.1| retrotransposon protein,
            putative, Ty1-copia sub-class [Oryza sativa Japonica
            Group] gi|108864259|gb|ABA92827.2| retrotransposon
            protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1184

 Score =  137 bits (346), Expect = 7e-31
 Identities = 64/84 (76%), Positives = 71/84 (84%)
 Frame = -2

Query: 257  HGVQLSRAHCPTTSAEMNRMKDVPYASAIGSIMYAMLCTRPDVSYALSVTSRYQANPGES 78
            HG+ L +  CP T+ E N+M  +PYASAIGSIMYAMLCTRPDVSYALS TSRYQ++PGES
Sbjct: 941  HGINLGKNQCPQTTDERNKMSVIPYASAIGSIMYAMLCTRPDVSYALSATSRYQSDPGES 1000

Query: 77   HWIAVKCILKYLRRTKDAFLVYGG 6
            HWIAVK ILKYLRRTKD FL YGG
Sbjct: 1001 HWIAVKNILKYLRRTKDMFLAYGG 1024


>gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1050

 Score =  137 bits (345), Expect = 9e-31
 Identities = 64/84 (76%), Positives = 71/84 (84%)
 Frame = -2

Query: 257  HGVQLSRAHCPTTSAEMNRMKDVPYASAIGSIMYAMLCTRPDVSYALSVTSRYQANPGES 78
            HG+ L +  CP T+ E N+M  +PYASAIGSIMYAMLCT PDVSYALS TSRYQ++PGES
Sbjct: 804  HGINLGKNQCPQTTDERNKMSVIPYASAIGSIMYAMLCTHPDVSYALSATSRYQSDPGES 863

Query: 77   HWIAVKCILKYLRRTKDAFLVYGG 6
            HWIAVK ILKYLRRTKD FLVYGG
Sbjct: 864  HWIAVKNILKYLRRTKDMFLVYGG 887


>dbj|BAA22288.1| polyprotein [Oryza australiensis]
          Length = 1317

 Score =  137 bits (344), Expect = 1e-30
 Identities = 65/85 (76%), Positives = 71/85 (83%)
 Frame = -2

Query: 257  HGVQLSRAHCPTTSAEMNRMKDVPYASAIGSIMYAMLCTRPDVSYALSVTSRYQANPGES 78
            HG+ LS+  CP T  E N+M  VPYASAIGSIMYAMLCTRPDVSYALS TSRYQ++PGE 
Sbjct: 1070 HGINLSKNQCPQTHDERNKMGMVPYASAIGSIMYAMLCTRPDVSYALSATSRYQSDPGEG 1129

Query: 77   HWIAVKCILKYLRRTKDAFLVYGGD 3
            HW AVK ILKYLRRTKD FLVYGG+
Sbjct: 1130 HWTAVKNILKYLRRTKDMFLVYGGE 1154


>gb|AAX94813.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77550379|gb|ABA93176.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 938

 Score =  136 bits (343), Expect = 2e-30
 Identities = 63/84 (75%), Positives = 72/84 (85%)
 Frame = -2

Query: 257  HGVQLSRAHCPTTSAEMNRMKDVPYASAIGSIMYAMLCTRPDVSYALSVTSRYQANPGES 78
            HG+ L +  CP T+ E N+M  +PYASAIGSIMYAMLCTRPDVSYALS TS+YQ++PGES
Sbjct: 789  HGINLGKNQCPQTTNERNKMSVIPYASAIGSIMYAMLCTRPDVSYALSATSQYQSDPGES 848

Query: 77   HWIAVKCILKYLRRTKDAFLVYGG 6
            HWIA+K ILKYLRRTKD FLVYGG
Sbjct: 849  HWIALKNILKYLRRTKDMFLVYGG 872