BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00034400
         (600 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307761.1| predicted protein [Populus trichocarpa] gi|2...   313   2e-83
ref|XP_002510695.1| pentatricopeptide repeat-containing protein,...   308   6e-82
emb|CBI40732.3| unnamed protein product [Vitis vinifera]              303   2e-80
emb|CAN84084.1| hypothetical protein VITISV_018999 [Vitis vinifera]   303   2e-80
ref|NP_199195.4| pentatricopeptide repeat-containing protein [Ar...   293   2e-77

>ref|XP_002307761.1| predicted protein [Populus trichocarpa] gi|222857210|gb|EEE94757.1|
           predicted protein [Populus trichocarpa]
          Length = 563

 Score =  313 bits (801), Expect = 2e-83
 Identities = 144/196 (73%), Positives = 175/196 (89%)
 Frame = -2

Query: 599 MLRDKCDPDMDTYSGLVSTLLSGRRVADAIEMFDQMLDRGMVPKTGTVTSFLEPLCSYGP 420
           +L   CDP++DTY+ ++S L+   +VADA+EMFD+MLDRGMV KTGTVTSF+EPLCS+GP
Sbjct: 368 LLSKNCDPNIDTYTRMISGLIKASKVADALEMFDEMLDRGMVTKTGTVTSFIEPLCSFGP 427

Query: 419 PHAALMIYKKAKKSGCRISLSAYKLLLSRLSKFGKCGMLLSLWNEMQESGYSSDMEVYEY 240
           PHAA++IY KA+K GC+ISLSAYKLLL RLS+FGKCGM+L +W+EMQESGYSSDMEVYEY
Sbjct: 428 PHAAMVIYTKARKVGCKISLSAYKLLLMRLSRFGKCGMMLKIWDEMQESGYSSDMEVYEY 487

Query: 239 IINGLCNIGHLENAVLLMEEALKEGFFPSRFICSKLNNKLLAANKVERAYKLFLKIKAAR 60
           +I+GLCNIG  ENAVL+MEE++++GF PSRFICSKLNNKLLA+NKVERAY+LFLKIK AR
Sbjct: 488 LISGLCNIGQFENAVLVMEESMRKGFCPSRFICSKLNNKLLASNKVERAYRLFLKIKHAR 547

Query: 59  LSENTQRHWRAKGWHF 12
            SEN +R WR+ GWHF
Sbjct: 548 HSENARRCWRSNGWHF 563



 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 41/181 (22%), Positives = 84/181 (46%), Gaps = 1/181 (0%)
 Frame = -2

Query: 569 DTYSGLVSTLLSGRRVADAIEMFDQMLDR-GMVPKTGTVTSFLEPLCSYGPPHAALMIYK 393
           +T+S ++ +L+  RRV  AI+MF  + +  G      ++   L+ LC      AA   Y 
Sbjct: 203 ETFSIVIDSLVRARRVYKAIQMFGNLEEEFGFERDAESLNVLLQCLCRRSHVGAANS-YF 261

Query: 392 KAKKSGCRISLSAYKLLLSRLSKFGKCGMLLSLWNEMQESGYSSDMEVYEYIINGLCNIG 213
            + K     +   Y +++   SKFG+   +  ++ EM+E G+S D   + Y++ GL   G
Sbjct: 262 NSVKGKIPFNCMTYNVIIGGWSKFGRVSEMQRVFEEMEEDGFSPDCLSFSYLLEGLGRAG 321

Query: 212 HLENAVLLMEEALKEGFFPSRFICSKLNNKLLAANKVERAYKLFLKIKAARLSENTQRHW 33
            +E+AV++     ++G  P   + + + +  ++    +   K +  + +     N   + 
Sbjct: 322 KIEDAVMIFGSMEEKGCVPDTNVYNAMISNFISVGNFDECMKYYRCLLSKNCDPNIDTYT 381

Query: 32  R 30
           R
Sbjct: 382 R 382



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 36/145 (24%), Positives = 63/145 (43%)
 Frame = -2

Query: 599 MLRDKCDPDMDTYSGLVSTLLSGRRVADAIEMFDQMLDRGMVPKTGTVTSFLEPLCSYGP 420
           M  D   PD  ++S L+  L    ++ DA+ +F  M ++G VP T    + +    S G 
Sbjct: 298 MEEDGFSPDCLSFSYLLEGLGRAGKIEDAVMIFGSMEEKGCVPDTNVYNAMISNFISVGN 357

Query: 419 PHAALMIYKKAKKSGCRISLSAYKLLLSRLSKFGKCGMLLSLWNEMQESGYSSDMEVYEY 240
               +  Y+      C  ++  Y  ++S L K  K    L +++EM + G  +       
Sbjct: 358 FDECMKYYRCLLSKNCDPNIDTYTRMISGLIKASKVADALEMFDEMLDRGMVTKTGTVTS 417

Query: 239 IINGLCNIGHLENAVLLMEEALKEG 165
            I  LC+ G    A+++  +A K G
Sbjct: 418 FIEPLCSFGPPHAAMVIYTKARKVG 442


>ref|XP_002510695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223551396|gb|EEF52882.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 195

 Score =  308 bits (788), Expect = 6e-82
 Identities = 139/195 (71%), Positives = 175/195 (89%)
 Frame = -2

Query: 596 LRDKCDPDMDTYSGLVSTLLSGRRVADAIEMFDQMLDRGMVPKTGTVTSFLEPLCSYGPP 417
           +R+ CDPD++TY+ L+S  + GR+VADA+EM D+ML RG+VP TG +TSF+EPLCS+GPP
Sbjct: 1   MRNNCDPDINTYTKLISAFIKGRKVADALEMLDEMLGRGIVPTTGDITSFIEPLCSFGPP 60

Query: 416 HAALMIYKKAKKSGCRISLSAYKLLLSRLSKFGKCGMLLSLWNEMQESGYSSDMEVYEYI 237
           HAA+MIYKKA+K+GC+ISL+AYKLLL RLS+FGKCGMLL++W+EMQE+GY+SDMEVYEY+
Sbjct: 61  HAAMMIYKKARKAGCKISLTAYKLLLMRLSRFGKCGMLLNIWDEMQENGYTSDMEVYEYV 120

Query: 236 INGLCNIGHLENAVLLMEEALKEGFFPSRFICSKLNNKLLAANKVERAYKLFLKIKAARL 57
           INGLCNIG LENAVL+MEE+L +GF PSR I SKLNNKLLA++KVERAYKL+LK++ AR 
Sbjct: 121 INGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLNNKLLASSKVERAYKLYLKVRDARS 180

Query: 56  SENTQRHWRAKGWHF 12
           +EN +R WRA GWHF
Sbjct: 181 NENARRFWRANGWHF 195


>emb|CBI40732.3| unnamed protein product [Vitis vinifera]
          Length = 520

 Score =  303 bits (775), Expect = 2e-80
 Identities = 141/196 (71%), Positives = 166/196 (84%)
 Frame = -2

Query: 599 MLRDKCDPDMDTYSGLVSTLLSGRRVADAIEMFDQMLDRGMVPKTGTVTSFLEPLCSYGP 420
           M+   CDP+MDTY+ L+   L  R+VADA+EM D+M+ RGM+P TG +TSF+EPLC YGP
Sbjct: 325 MVSSNCDPNMDTYTKLIVAFLKARKVADALEMLDEMVGRGMIPTTGAITSFIEPLCQYGP 384

Query: 419 PHAALMIYKKAKKSGCRISLSAYKLLLSRLSKFGKCGMLLSLWNEMQESGYSSDMEVYEY 240
           PHAA+MIYKKA+K GCRISLSAYKLLL RLS+FGKCGMLL+LW+EMQESGYSSD EVYEY
Sbjct: 385 PHAAMMIYKKARKVGCRISLSAYKLLLMRLSRFGKCGMLLNLWDEMQESGYSSDTEVYEY 444

Query: 239 IINGLCNIGHLENAVLLMEEALKEGFFPSRFICSKLNNKLLAANKVERAYKLFLKIKAAR 60
           +INGLCNIG L+ AVL+MEE+L +GF PSR I SKLNNKLLA+NKVE AYKLFLKIK AR
Sbjct: 445 VINGLCNIGQLDTAVLVMEESLHKGFCPSRLIRSKLNNKLLASNKVEMAYKLFLKIKIAR 504

Query: 59  LSENTQRHWRAKGWHF 12
            ++N +R WR  GWHF
Sbjct: 505 QNDNARRFWRGNGWHF 520



 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 39/166 (23%), Positives = 78/166 (46%)
 Frame = -2

Query: 578 PDMDTYSGLVSTLLSGRRVADAIEMFDQMLDRGMVPKTGTVTSFLEPLCSYGPPHAALMI 399
           P+ +T S ++ + +  R+V+ AIEMF  + + G    T ++   L+ LC      AA + 
Sbjct: 158 PNYETLSIVMDSFIKARQVSKAIEMFRNLEEFGGKCDTESLNVLLQCLCQRSHVGAANLF 217

Query: 398 YKKAKKSGCRISLSAYKLLLSRLSKFGKCGMLLSLWNEMQESGYSSDMEVYEYIINGLCN 219
           +  A K G   +   Y +++   SK+GK G +      M   G+S +   + ++I GL  
Sbjct: 218 FN-AMKGGIPFNCMTYNIIIGGWSKYGKIGEMERCLKAMVADGFSPNCLTFSHLIEGLGR 276

Query: 218 IGHLENAVLLMEEALKEGFFPSRFICSKLNNKLLAANKVERAYKLF 81
            G +++AV +     + G  P+  + + L +  ++    +   K +
Sbjct: 277 AGRIDDAVEVFHHMEETGCVPNACVYNALISNFISTRDFDECLKYY 322


>emb|CAN84084.1| hypothetical protein VITISV_018999 [Vitis vinifera]
          Length = 561

 Score =  303 bits (775), Expect = 2e-80
 Identities = 141/196 (71%), Positives = 166/196 (84%)
 Frame = -2

Query: 599 MLRDKCDPDMDTYSGLVSTLLSGRRVADAIEMFDQMLDRGMVPKTGTVTSFLEPLCSYGP 420
           M+   CDP+MDTY+ L+   L  R+VADA+EM D+M+ RGM+P TG +TSF+EPLC YGP
Sbjct: 366 MVSSNCDPNMDTYTKLIVAFLKARKVADALEMLDEMVGRGMIPTTGAITSFIEPLCQYGP 425

Query: 419 PHAALMIYKKAKKSGCRISLSAYKLLLSRLSKFGKCGMLLSLWNEMQESGYSSDMEVYEY 240
           PHAA+MIYKKA+K GCRISLSAYKLLL RLS+FGKCGMLL+LW+EMQESGYSSD EVYEY
Sbjct: 426 PHAAMMIYKKARKVGCRISLSAYKLLLMRLSRFGKCGMLLNLWDEMQESGYSSDTEVYEY 485

Query: 239 IINGLCNIGHLENAVLLMEEALKEGFFPSRFICSKLNNKLLAANKVERAYKLFLKIKAAR 60
           +INGLCNIG L+ AVL+MEE+L +GF PSR I SKLNNKLLA+NKVE AYKLFLKIK AR
Sbjct: 486 VINGLCNIGQLDTAVLVMEESLXKGFCPSRLIRSKLNNKLLASNKVEMAYKLFLKIKXAR 545

Query: 59  LSENTQRHWRAKGWHF 12
            ++N +R WR  GWHF
Sbjct: 546 QNDNARRFWRGNGWHF 561



 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 39/166 (23%), Positives = 78/166 (46%)
 Frame = -2

Query: 578 PDMDTYSGLVSTLLSGRRVADAIEMFDQMLDRGMVPKTGTVTSFLEPLCSYGPPHAALMI 399
           P+ +T S ++ + +  R+V+ AIEMF  + + G    T ++   L+ LC      AA + 
Sbjct: 199 PNYETLSIVMDSFIKARQVSKAIEMFRNLEEFGGKCDTESLNVLLQCLCQRSHVGAANLF 258

Query: 398 YKKAKKSGCRISLSAYKLLLSRLSKFGKCGMLLSLWNEMQESGYSSDMEVYEYIINGLCN 219
           +  A K G   +   Y +++   SK+GK G +      M   G+S +   + ++I GL  
Sbjct: 259 FN-AMKGGIPFNCMTYNIIIGGWSKYGKIGEMERCLKAMVADGFSPNCLTFSHLIEGLGR 317

Query: 218 IGHLENAVLLMEEALKEGFFPSRFICSKLNNKLLAANKVERAYKLF 81
            G +++AV +     + G  P+  + + L +  ++    +   K +
Sbjct: 318 AGRIDDAVEVFHHMEETGCVPNACVYNALISNFISTRDFDECLKYY 363


>ref|NP_199195.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|223635652|sp|P0C8R0.1|PP416_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At5g43820 gi|332007631|gb|AED95014.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 546

 Score =  293 bits (749), Expect = 2e-77
 Identities = 132/196 (67%), Positives = 175/196 (89%)
 Frame = -2

Query: 599 MLRDKCDPDMDTYSGLVSTLLSGRRVADAIEMFDQMLDRGMVPKTGTVTSFLEPLCSYGP 420
           ML ++C+P+++TYS LVS L+ GR+V+DA+E+F++ML RG++P TG VTSFL+PLCSYGP
Sbjct: 351 MLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGP 410

Query: 419 PHAALMIYKKAKKSGCRISLSAYKLLLSRLSKFGKCGMLLSLWNEMQESGYSSDMEVYEY 240
           PHAA++IY+K++K+GCRIS SAYKLLL RLS+FGKCGMLL++W+EMQESGY SD+EVYEY
Sbjct: 411 PHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEY 470

Query: 239 IINGLCNIGHLENAVLLMEEALKEGFFPSRFICSKLNNKLLAANKVERAYKLFLKIKAAR 60
           I++GLC IGHLENAVL+MEEA+++GF P+RF+ S+L++KL+A+NK E AYKLFLKIK AR
Sbjct: 471 IVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAYKLFLKIKKAR 530

Query: 59  LSENTQRHWRAKGWHF 12
            +EN +  WR+ GWHF
Sbjct: 531 ATENARSFWRSNGWHF 546



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 39/188 (20%), Positives = 85/188 (45%)
 Frame = -2

Query: 599 MLRDKCDPDMDTYSGLVSTLLSGRRVADAIEMFDQMLDRGMVPKTGTVTSFLEPLCSYGP 420
           M+ +  +PD++  +  + + +    V  AIE+F++    G+   T +  + L  LC    
Sbjct: 177 MVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSH 236

Query: 419 PHAALMIYKKAKKSGCRISLSAYKLLLSRLSKFGKCGMLLSLWNEMQESGYSSDMEVYEY 240
             AA  ++  AKK        +Y +++S  SK G+   +  +  EM ESG+  D   Y +
Sbjct: 237 VSAAKSVFN-AKKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSH 295

Query: 239 IINGLCNIGHLENAVLLMEEALKEGFFPSRFICSKLNNKLLAANKVERAYKLFLKIKAAR 60
           +I GL   G + ++V + +    +G  P   + + +    ++A   + + + + ++    
Sbjct: 296 LIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEE 355

Query: 59  LSENTQRH 36
              N + +
Sbjct: 356 CEPNLETY 363