BLASTX nr result

ID: Lithospermum22_contig00034345 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00034345
         (437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316273.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15
ref|XP_002311179.1| predicted protein [Populus trichocarpa] gi|2...    85   5e-15
ref|XP_002524200.1| pumilio, putative [Ricinus communis] gi|2235...    85   7e-15
ref|XP_002524201.1| pumilio, putative [Ricinus communis] gi|2235...    84   9e-15
ref|XP_002278108.2| PREDICTED: pumilio homolog 1-like [Vitis vin...    77   1e-12

>ref|XP_002316273.1| predicted protein [Populus trichocarpa] gi|222865313|gb|EEF02444.1|
           predicted protein [Populus trichocarpa]
          Length = 938

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 58/161 (36%), Positives = 82/161 (50%), Gaps = 16/161 (9%)
 Frame = -1

Query: 437 DGSCDESLFYVQSAFGGGNEENRK----QWTGPGL---------GRQESIAKMIQDDASQ 297
           D     SLF VQ  FGGG EEN      +W G GL          RQ+SIA++IQDD   
Sbjct: 127 DNEGQRSLFAVQPGFGGGQEENGNGNGVEWGGDGLIGLPGFGLGSRQKSIAEIIQDDMG- 185

Query: 296 SPGAFHLSPLAAVDVLHAGSSALGD---AANGQLKSTLQNTGSSVSQTYAAALGGSISRS 126
                H +P++         +A  D    +       LQN G+S S TYA+ALG S+SRS
Sbjct: 186 -----HANPISRHPSRPTSRNAFDDNVETSEAHFSQLLQNGGASASHTYASALGASLSRS 240

Query: 125 TTPDHQRGSKSPSPLSPFAMEESVSSLERRTVADPNVFDEV 3
           TTPD Q  +++PSP  P       +S+++R V+  + ++ +
Sbjct: 241 TTPDPQLVARAPSPRIPPIGGGRTNSMDKRDVSGSHSYNGI 281


>ref|XP_002311179.1| predicted protein [Populus trichocarpa] gi|222850999|gb|EEE88546.1|
           predicted protein [Populus trichocarpa]
          Length = 999

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 65/170 (38%), Positives = 92/170 (54%), Gaps = 31/170 (18%)
 Frame = -1

Query: 419 SLFYVQSAFGGGNEENRKQ----WTG------PGLG---RQESIAKMIQDDASQS-PGAF 282
           SLF VQ  FGGG EEN  +    W G      PGLG   RQ+SIA++IQ+D   + P + 
Sbjct: 154 SLFAVQPGFGGGMEENGNENGVEWGGDGLIGLPGLGLGSRQKSIAEIIQNDMGHANPISR 213

Query: 281 HLSPLAAVDV--------------LH---AGSSALGDAANGQLKSTLQNTGSSVSQTYAA 153
           H S  A+ +               LH   A   AL  ++N Q  S +QN G+S S TYA+
Sbjct: 214 HPSRPASRNAFDDDMETSEAQFSQLHGDLASLDALRSSSNKQGMSAVQNIGASASHTYAS 273

Query: 152 ALGGSISRSTTPDHQRGSKSPSPLSPFAMEESVSSLERRTVADPNVFDEV 3
           ALG ++SRSTTPD Q  +++PSP  P       +S+++R V+  + F+ +
Sbjct: 274 ALGATLSRSTTPDPQLVARAPSPRIPPIGGGRTNSMDKRDVSGSHSFNGI 323


>ref|XP_002524200.1| pumilio, putative [Ricinus communis] gi|223536477|gb|EEF38124.1|
           pumilio, putative [Ricinus communis]
          Length = 1011

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 66/171 (38%), Positives = 88/171 (51%), Gaps = 30/171 (17%)
 Frame = -1

Query: 425 DESLFYVQSAFGGGNEENRK----QWTG------PGLG---RQESIAKMIQDDASQS-PG 288
           + SLF VQ   GGGNEEN      +W G      PGLG   RQ+SIA++IQDD S + P 
Sbjct: 153 NRSLFAVQPGVGGGNEENGNGGGVEWGGDGLIGLPGLGLGSRQKSIAEIIQDDMSHANPT 212

Query: 287 AFHLSPLAAVDV--------------LH--AGSSALGDAANGQLKSTLQNTGSSVSQTYA 156
           + H S  A+ +               LH    S AL   AN Q  S +   G++ S +YA
Sbjct: 213 SRHPSRPASRNAFDDDVDNSEPQFAQLHNLTSSDALRSVANKQGVSVVPTVGATASHSYA 272

Query: 155 AALGGSISRSTTPDHQRGSKSPSPLSPFAMEESVSSLERRTVADPNVFDEV 3
           + LG S+SRSTTPD Q  +++PSP  P       +S+++R V   N F  V
Sbjct: 273 SVLGASLSRSTTPDPQLVARAPSPRIPPIGGGRANSIDKRDVNGSNSFKGV 323


>ref|XP_002524201.1| pumilio, putative [Ricinus communis] gi|223536478|gb|EEF38125.1|
           pumilio, putative [Ricinus communis]
          Length = 999

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 66/171 (38%), Positives = 85/171 (49%), Gaps = 30/171 (17%)
 Frame = -1

Query: 425 DESLFYVQSAFGGGNEENRK----QWTG------PGLG---RQESIAKMIQDDASQ---- 297
           + SLF VQ  FGGGNEEN      +W G      PGLG   RQ+SIA++ QDD S     
Sbjct: 154 NRSLFAVQPGFGGGNEENGNGGGVEWGGDGLIGLPGLGLGSRQKSIAEIFQDDMSHANST 213

Query: 296 --------SPGAF-----HLSPLAAVDVLHAGSSALGDAANGQLKSTLQNTGSSVSQTYA 156
                   S  AF     +  P  A       S AL   AN Q  S + N G++ S +YA
Sbjct: 214 SRHPSRPSSRNAFDDDVDNSEPQFAQLHNLTSSDALRSVANKQGVSVVPNVGATASHSYA 273

Query: 155 AALGGSISRSTTPDHQRGSKSPSPLSPFAMEESVSSLERRTVADPNVFDEV 3
           +ALG S+SRSTTPD    +++PSP  P       +S+++R V   N F  V
Sbjct: 274 SALGASLSRSTTPDPHLVARAPSPRIPPIGGGRANSIDKRDVNGSNSFKGV 324


>ref|XP_002278108.2| PREDICTED: pumilio homolog 1-like [Vitis vinifera]
          Length = 1015

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 66/181 (36%), Positives = 88/181 (48%), Gaps = 42/181 (23%)
 Frame = -1

Query: 419 SLFYVQSAFGGGNEEN----RK----QWTG------PGLG---RQESIAKMIQDDASQ-- 297
           SLF +Q  F G  +EN    RK    +W G      PGLG   RQ+S+A++IQDD     
Sbjct: 160 SLFLMQPGFNGQKDENGAESRKAQGVEWGGDGLIGLPGLGLGSRQKSLAEIIQDDIGHAT 219

Query: 296 ----------SPGAF------------HLS-PLAAVDVLHAGSSALGDAANGQLKSTLQN 186
                     S  AF            HL   LA++D L +G+         Q  S +QN
Sbjct: 220 SVSRHPSRPASRNAFDDNVETSEAQFSHLHHELASMDALRSGTKI-------QAISAVQN 272

Query: 185 TGSSVSQTYAAALGGSISRSTTPDHQRGSKSPSPLSPFAMEESVSSLERRTVADPNVFDE 6
             SS S TYA+ALG S+SRSTTPD Q  +++PSP  P       SS+++R+    N F+ 
Sbjct: 273 VASSASHTYASALGASLSRSTTPDPQLVARAPSPRIPTVGGGRTSSMDKRSGNGSNSFNS 332

Query: 5   V 3
           V
Sbjct: 333 V 333


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