BLASTX nr result

ID: Lithospermum22_contig00034332 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00034332
         (460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65039.1| hypothetical protein VITISV_009459 [Vitis vinifera]    77   2e-12
ref|XP_002512124.1| hypothetical protein RCOM_1621800 [Ricinus c...    59   4e-07
ref|XP_002316103.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06

>emb|CAN65039.1| hypothetical protein VITISV_009459 [Vitis vinifera]
          Length = 1250

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 54/166 (32%), Positives = 79/166 (47%), Gaps = 14/166 (8%)
 Frame = -1

Query: 457  GLEGFHKSQDYASHTYGESSNSD------MFLGSHGVAHTRPHIMSPWGKAADSSSPKLT 296
            GLE   KSQ  +++ + E + S        F+ S  +A +  H +S W K +   S K  
Sbjct: 508  GLEISEKSQGLSNYNHAEQAVSSHLPSQCQFVFSSDLAKSWSHSVSSWEKMSSGLSQKSM 567

Query: 295  SLHSQNLSKG---LIKTLQSSVVSKDILGHKWYVNNSSHSSPVLTRNPPSYNGCYHASSS 125
            S+ +Q        L K+LQSS  S  I GHKW+++++S S+P       + NG YH SSS
Sbjct: 568  SIQTQPFLTSPTTLSKSLQSSAQSHGIFGHKWHLDSNSRSNPGFGSEVANRNGFYHGSSS 627

Query: 124  SKDS-----TGFRFDPLNCSRGDNIASSLPVNHGMEKACMTPSCID 2
                     T   FD LNC+ GD+  S   +  G  K     +C+D
Sbjct: 628  GSKELPIGFTSIGFDYLNCTNGDSAVSGHLI-EGSAKYSKGSNCMD 672


>ref|XP_002512124.1| hypothetical protein RCOM_1621800 [Ricinus communis]
           gi|223549304|gb|EEF50793.1| hypothetical protein
           RCOM_1621800 [Ricinus communis]
          Length = 1085

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 41/133 (30%), Positives = 62/133 (46%), Gaps = 8/133 (6%)
 Frame = -1

Query: 376 SHGVAHTRPHIMSPWGKAADSSSPKLTSLHSQ---NLSKGLIKTLQSSVVSKDILGHKWY 206
           S  ++ + PH +S W K + S + K  S+      N S  L ++ QSS  S  +LG +W 
Sbjct: 440 SPNLSKSWPHSISSWEKLSGSLNTKSISVQMHPYFNSSGTLSRSSQSSTQSHGVLGDRWN 499

Query: 205 VNNSSHSSPVLTRNPPSYNGCYHASSSSKDSTGFRF-----DPLNCSRGDNIASSLPVNH 41
             ++S S+  +    P  NG Y+ SSS       +F     D LNCS   NIA +    H
Sbjct: 500 YTSNSASNLRINSEMPDQNGYYYGSSSGSKELLIQFPSGNRDFLNCSSAHNIAPAHFPYH 559

Query: 40  GMEKACMTPSCID 2
              K   + +C+D
Sbjct: 560 DSAKHYKSSNCVD 572


>ref|XP_002316103.1| predicted protein [Populus trichocarpa] gi|222865143|gb|EEF02274.1|
           predicted protein [Populus trichocarpa]
          Length = 1114

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 50/171 (29%), Positives = 71/171 (41%), Gaps = 19/171 (11%)
 Frame = -1

Query: 457 GLEGFHKSQDYASHTYGESSNSDMFLGSH-----------GVAHTRPHIMSPWGKAADSS 311
           GLE   ++ + A+  Y ES      + SH            V       +S W   A S 
Sbjct: 407 GLELSERNHEIANSNYSES-----VIASHRPSPYPIGPPSDVGKPWCQSVSSWEMPAVSL 461

Query: 310 SPKLTSLHSQ---NLSKGLIKTLQSSVVSKDILGHKWYVNNSSHSSPVLTRNPPSYNGCY 140
           S K  S+      N S  L ++ QSS  S    G +   N++S S+P      P+ NG Y
Sbjct: 462 SQKSMSVQMHPYLNSSATLSRSSQSSTQSHGYFGDQRNYNSNSTSNPSFASEMPNRNGFY 521

Query: 139 HASSSSKDSTGFR-----FDPLNCSRGDNIASSLPVNHGMEKACMTPSCID 2
           H SSS       R     +D  NC+  +N AS   +NH   K   +P+C+D
Sbjct: 522 HGSSSGSKEPSVRLASGNYDYWNCASTNNGASEHFINHSSAKFNKSPNCMD 572


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