BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00034323
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    52   2e-11
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...    51   6e-08
dbj|BAB01344.1| reverse transcriptase-like protein [Arabidopsis ...    48   6e-07
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]            56   4e-06
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...    56   4e-06

>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 52.0 bits (123), Expect(2) = 2e-11
 Identities = 26/66 (39%), Positives = 37/66 (56%)
 Frame = -1

Query: 289 LSYAGRLVSLNTVIFGKENYWCQNVYLPVAVIKKIEGMVHCFLWKGEAQGKFLPKVS*KH 110
           LSYAGR+  +N+V+F  + YW     LP  VIK +E ++  FLW G        KV+   
Sbjct: 92  LSYAGRVQLINSVLFSIQVYWASLFLLPGQVIKNVEQIMKSFLWSGSDMRTTGAKVAWDQ 151

Query: 109 ITLPRK 92
           + LP+K
Sbjct: 152 VCLPKK 157



 Score = 41.6 bits (96), Expect(2) = 2e-11
 Identities = 11/30 (36%), Positives = 25/30 (83%)
 Frame = -2

Query: 93  KKGSLGVKCLQDWNRICMAQHLWDICSNKE 4
           K+G LG+K +++WN+I + +H+W++C++ +
Sbjct: 157 KEGGLGIKSIKEWNKIALLKHIWNLCNDSD 186


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score = 51.2 bits (121), Expect(2) = 6e-08
 Identities = 26/68 (38%), Positives = 35/68 (51%)
 Frame = -1

Query: 295  KHLSYAGRLVSLNTVIFGKENYWCQNVYLPVAVIKKIEGMVHCFLWKGEAQGKFLPKVS* 116
            + LSYAGRL  LN+VI    N+W     LP   I++IE +   FLW G        K++ 
Sbjct: 1100 RSLSYAGRLALLNSVIVSIANFWMSAYRLPAGCIREIEKLCSAFLWSGPVLNPKKAKIAW 1159

Query: 115  KHITLPRK 92
              I  P+K
Sbjct: 1160 SSICQPKK 1167



 Score = 30.4 bits (67), Expect(2) = 6e-08
 Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = -2

Query: 108  SLCQGKK-GSLGVKCLQDWNRICMAQHLWDICSNKES 1
            S+CQ KK G LG+K L + N++   + +W + S + S
Sbjct: 1161 SICQPKKEGGLGIKSLAEANKVSCLKLIWRLLSTQPS 1197


>dbj|BAB01344.1| reverse transcriptase-like protein [Arabidopsis thaliana]
          Length = 1115

 Score = 47.8 bits (112), Expect(2) = 6e-07
 Identities = 23/69 (33%), Positives = 39/69 (56%)
 Frame = -1

Query: 298 NKHLSYAGRLVSLNTVIFGKENYWCQNVYLPVAVIKKIEGMVHCFLWKGEAQGKFLPKVS 119
           +++LS+AGRL  +++V++   N+W     LP A +K+I  +   FLW G    +   KVS
Sbjct: 719 SRYLSFAGRLNLISSVLWSTMNFWMSAFRLPSACLKEINSICSAFLWSGPELNRRKAKVS 778

Query: 118 *KHITLPRK 92
              I  P++
Sbjct: 779 WDDICKPKQ 787



 Score = 30.4 bits (67), Expect(2) = 6e-07
 Identities = 11/35 (31%), Positives = 23/35 (65%)
 Frame = -2

Query: 105 LCQGKKGSLGVKCLQDWNRICMAQHLWDICSNKES 1
           +C+ K+G LG++ L + N + + + +W + SN +S
Sbjct: 782 ICKPKQGGLGLRSLTEANVVSVLKLIWRVTSNDDS 816


>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 29/68 (42%), Positives = 38/68 (55%)
 Frame = -1

Query: 298 NKHLSYAGRLVSLNTVIFGKENYWCQNVYLPVAVIKKIEGMVHCFLWKGEAQGKFLPKVS 119
           +K LS+AGR   +++VIFG  N+W     LP   IKKIE +   FLW G   G+   KVS
Sbjct: 655 SKALSFAGRTQLISSVIFGLINFWMSTFLLPKGCIKKIESLCSKFLWAGSIDGRKSSKVS 714

Query: 118 *KHITLPR 95
                LP+
Sbjct: 715 WVDCCLPK 722


>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
           thaliana]
          Length = 1072

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 29/68 (42%), Positives = 38/68 (55%)
 Frame = -1

Query: 298 NKHLSYAGRLVSLNTVIFGKENYWCQNVYLPVAVIKKIEGMVHCFLWKGEAQGKFLPKVS 119
           +K LS+AGR   +++VIFG  N+W     LP   IKKIE +   FLW G   G+   KVS
Sbjct: 655 SKALSFAGRTQLISSVIFGLINFWMSTFLLPKGCIKKIESLCSKFLWAGSIDGRKSSKVS 714

Query: 118 *KHITLPR 95
                LP+
Sbjct: 715 WVDCCLPK 722