BLASTX nr result

ID: Lithospermum22_contig00034285 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00034285
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509552.1| Sister chromatid cohesion 1 protein, putativ...    83   3e-14
ref|XP_002331697.1| predicted protein [Populus trichocarpa] gi|2...    82   4e-14
emb|CBI40063.3| unnamed protein product [Vitis vinifera]               75   7e-12
ref|XP_002270491.1| PREDICTED: sister chromatid cohesion 1 prote...    75   7e-12
ref|XP_003581370.1| PREDICTED: uncharacterized protein LOC100843...    69   4e-10

>ref|XP_002509552.1| Sister chromatid cohesion 1 protein, putative [Ricinus communis]
           gi|223549451|gb|EEF50939.1| Sister chromatid cohesion 1
           protein, putative [Ricinus communis]
          Length = 781

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 38/74 (51%), Positives = 48/74 (64%)
 Frame = -3

Query: 354 RITMKRKCYYDDQLVVPNEIFKCWINDPSDLVCKRRKVPHTAFSLWEAQKISGLPGNFLE 175
           R+  KRKC +DD +V PN + K  I D SDLV KR+K PHTA + W A ++S LP  FLE
Sbjct: 443 RVPRKRKCVFDDTIVFPNNVIKQCIEDSSDLVSKRKKAPHTALTAWRASRVSRLPRCFLE 502

Query: 174 PLISCNSLDFRYLI 133
            LI C + D R L+
Sbjct: 503 SLIPCTASDLRSLL 516


>ref|XP_002331697.1| predicted protein [Populus trichocarpa] gi|222874175|gb|EEF11306.1|
           predicted protein [Populus trichocarpa]
          Length = 770

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 46/111 (41%), Positives = 65/111 (58%)
 Frame = -3

Query: 354 RITMKRKCYYDDQLVVPNEIFKCWINDPSDLVCKRRKVPHTAFSLWEAQKISGLPGNFLE 175
           R   KRKC++DD +V PN + K  I +  DLV KRRK+PHTAF++W+A + S L   FLE
Sbjct: 386 RALRKRKCFFDDVVVFPNNVIKECIENTGDLVSKRRKLPHTAFAVWKACRFSNLDKCFLE 445

Query: 174 PLISCNSLDFRYLIGERTYRSEKGYQPASSSSVDQNQSVPTLLKEQNESAS 22
           PLI C SL+   L     +R++K   P +  SV  +  +    K+ + S S
Sbjct: 446 PLIPCASLELGSL-----FRTKKLQIPETVKSVGGSVEIEEPSKKLDASES 491


>emb|CBI40063.3| unnamed protein product [Vitis vinifera]
          Length = 621

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 36/73 (49%), Positives = 48/73 (65%)
 Frame = -3

Query: 354 RITMKRKCYYDDQLVVPNEIFKCWINDPSDLVCKRRKVPHTAFSLWEAQKISGLPGNFLE 175
           RI  KRKC +D+++V+ +E  K  I   SDL+ KRRKVPHTA+  W+  +I+ L   FLE
Sbjct: 356 RIPRKRKCLFDEKIVLSSEFLKKSIQSSSDLIRKRRKVPHTAYDAWKVYQIANLSQGFLE 415

Query: 174 PLISCNSLDFRYL 136
            LI C SL+ R L
Sbjct: 416 ALIPCISLELRSL 428


>ref|XP_002270491.1| PREDICTED: sister chromatid cohesion 1 protein 2-like [Vitis
           vinifera]
          Length = 756

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 36/73 (49%), Positives = 48/73 (65%)
 Frame = -3

Query: 354 RITMKRKCYYDDQLVVPNEIFKCWINDPSDLVCKRRKVPHTAFSLWEAQKISGLPGNFLE 175
           RI  KRKC +D+++V+ +E  K  I   SDL+ KRRKVPHTA+  W+  +I+ L   FLE
Sbjct: 491 RIPRKRKCLFDEKIVLSSEFLKKSIQSSSDLIRKRRKVPHTAYDAWKVYQIANLSQGFLE 550

Query: 174 PLISCNSLDFRYL 136
            LI C SL+ R L
Sbjct: 551 ALIPCISLELRSL 563


>ref|XP_003581370.1| PREDICTED: uncharacterized protein LOC100843631 [Brachypodium
           distachyon]
          Length = 741

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 28/68 (41%), Positives = 43/68 (63%)
 Frame = -3

Query: 360 RKRITMKRKCYYDDQLVVPNEIFKCWINDPSDLVCKRRKVPHTAFSLWEAQKISGLPGNF 181
           ++++    +  YD+ +V+PN++ +  I D SDLVCKRRK PHT    W+  KIS LP   
Sbjct: 438 KRQVKKGAEVLYDEDIVLPNDMMRQAIEDASDLVCKRRKAPHTYLDAWKVAKISSLPDTL 497

Query: 180 LEPLISCN 157
           ++PL  C+
Sbjct: 498 MDPLFPCS 505


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