BLASTX nr result
ID: Lithospermum22_contig00034282
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00034282
(732 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002272556.1| PREDICTED: pentatricopeptide repeat-containi... 354 1e-95
ref|XP_002515124.1| pentatricopeptide repeat-containing protein,... 330 2e-88
ref|XP_002874971.1| pentatricopeptide repeat-containing protein ... 322 6e-86
ref|XP_003539071.1| PREDICTED: pentatricopeptide repeat-containi... 321 8e-86
ref|XP_002302689.1| predicted protein [Populus trichocarpa] gi|2... 321 1e-85
>ref|XP_002272556.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01570
[Vitis vinifera]
Length = 792
Score = 354 bits (908), Expect = 1e-95
Identities = 168/225 (74%), Positives = 198/225 (88%)
Frame = +3
Query: 3 IKDALIVWEELKSSSGHEPDKFTYRIIIQGCSSSYLISEALKIFNEMQYNGFRPNILVYN 182
+KDALIVWEELK S GHEPD FTYRI+IQGCS SY + +A++IFNEMQYNGF P+ +VYN
Sbjct: 288 VKDALIVWEELKGS-GHEPDAFTYRILIQGCSKSYRMDDAMRIFNEMQYNGFCPDTIVYN 346
Query: 183 SILNGLFKSRKLMEACSLFEKMVDEGVRATCWTYNIVIDGLFKNGRGAAAYTLFCDLKKK 362
++L+GLFK+RK+MEAC +FEKMV++GVRA+CWT+NIVI GLF+NGR AA YTLFCDLKKK
Sbjct: 347 TLLDGLFKARKVMEACQVFEKMVEDGVRASCWTHNIVICGLFRNGRAAAGYTLFCDLKKK 406
Query: 363 GNNFVDGISYSIVILHLCRENMLELALDLVEEMESRGFVVDLVTITSLLIALYRLGRWDW 542
G FVDGI+YSIV+L LCRE LE AL LVEEME+RGFVVDLVTITSLLI ++ GRWDW
Sbjct: 407 G-KFVDGITYSIVVLQLCREGQLEEALQLVEEMEARGFVVDLVTITSLLIGFHKQGRWDW 465
Query: 543 TERLMKHIRDGNLVVNVIKWKENMEASLKTPQSKKKDFTPMFPSK 677
TERLMKHIRDGNLV NV+ WK NMEA +K PQS++KD+TPMFPS+
Sbjct: 466 TERLMKHIRDGNLVPNVLNWKANMEAYMKAPQSRRKDYTPMFPSE 510
Score = 65.5 bits (158), Expect = 1e-08
Identities = 46/160 (28%), Positives = 75/160 (46%)
Frame = +3
Query: 111 ISEALKIFNEMQYNGFRPNILVYNSILNGLFKSRKLMEACSLFEKMVDEGVRATCWTYNI 290
+S A K+F G P I YNS++ K EA +F +M ++ TYN+
Sbjct: 601 LSLACKLFEIFSNMGVDPVIYTYNSMMTAFVKKGYFNEAWGVFHEMGEKVCPPDIATYNV 660
Query: 291 VIDGLFKNGRGAAAYTLFCDLKKKGNNFVDGISYSIVILHLCRENMLELALDLVEEMESR 470
+I GL K GR A + L K+G ++D + Y+ +I L + ++ A L E+M S
Sbjct: 661 IIQGLGKMGRADLASAVLDMLMKQG-GYLDIVMYNTLINALGKAGRIDEATKLFEQMRSS 719
Query: 471 GFVVDLVTITSLLIALYRLGRWDWTERLMKHIRDGNLVVN 590
G D+VT +L+ + G+ + +K + D N
Sbjct: 720 GINPDVVTFNTLIEIHAKAGQLKAAYKFLKLMLDAGCSPN 759
Score = 57.8 bits (138), Expect = 2e-06
Identities = 42/160 (26%), Positives = 79/160 (49%)
Frame = +3
Query: 165 NILVYNSILNGLFKSRKLMEACSLFEKMVDEGVRATCWTYNIVIDGLFKNGRGAAAYTLF 344
+I + N+ L+ KL AC LFE + GV +TYN ++ K G A+ +F
Sbjct: 584 DIDMVNTYLSIFLAKGKLSLACKLFEIFSNMGVDPVIYTYNSMMTAFVKKGYFNEAWGVF 643
Query: 345 CDLKKKGNNFVDGISYSIVILHLCRENMLELALDLVEEMESRGFVVDLVTITSLLIALYR 524
++ +K D +Y+++I L + +LA +++ + +G +D+V +L+ AL +
Sbjct: 644 HEMGEKVCP-PDIATYNVIIQGLGKMGRADLASAVLDMLMKQGGYLDIVMYNTLINALGK 702
Query: 525 LGRWDWTERLMKHIRDGNLVVNVIKWKENMEASLKTPQSK 644
GR D +L + +R + +V+ + +E K Q K
Sbjct: 703 AGRIDEATKLFEQMRSSGINPDVVTFNTLIEIHAKAGQLK 742
>ref|XP_002515124.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223545604|gb|EEF47108.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 898
Score = 330 bits (845), Expect = 2e-88
Identities = 159/224 (70%), Positives = 192/224 (85%)
Frame = +3
Query: 3 IKDALIVWEELKSSSGHEPDKFTYRIIIQGCSSSYLISEALKIFNEMQYNGFRPNILVYN 182
+KDAL+V+EELK S GHEPD FTYRIII+GCS SY +++A KIF+EMQYNGF P+ VYN
Sbjct: 316 VKDALVVYEELKIS-GHEPDAFTYRIIIEGCSKSYRMNDATKIFSEMQYNGFVPDTTVYN 374
Query: 183 SILNGLFKSRKLMEACSLFEKMVDEGVRATCWTYNIVIDGLFKNGRGAAAYTLFCDLKKK 362
S+L+G+FK+RK+ EAC LFEKMV +GVRA+ WTYNI+IDGL KNGR AA Y+LFCDLKKK
Sbjct: 375 SLLDGMFKARKVTEACQLFEKMVQDGVRASSWTYNILIDGLCKNGRSAAGYSLFCDLKKK 434
Query: 363 GNNFVDGISYSIVILHLCRENMLELALDLVEEMESRGFVVDLVTITSLLIALYRLGRWDW 542
G FVD I+YSI++L LCRE L+ AL LVEEME RGFVVDLVTITSLLIA ++ GRWDW
Sbjct: 435 G-KFVDAITYSIIVLLLCREGQLKEALSLVEEMEERGFVVDLVTITSLLIAFHKQGRWDW 493
Query: 543 TERLMKHIRDGNLVVNVIKWKENMEASLKTPQSKKKDFTPMFPS 674
TE+LMKH+RDGNLV NV+ W+ +MEASLK P+S++KD+TPMF S
Sbjct: 494 TEKLMKHVRDGNLVPNVLNWQADMEASLKNPRSRRKDYTPMFLS 537
Score = 65.1 bits (157), Expect = 1e-08
Identities = 44/160 (27%), Positives = 77/160 (48%)
Frame = +3
Query: 111 ISEALKIFNEMQYNGFRPNILVYNSILNGLFKSRKLMEACSLFEKMVDEGVRATCWTYNI 290
+S A K+F G P YNSI++ K EA + +M ++ + TYN+
Sbjct: 633 LSVACKLFEIFSDMGVNPVSYTYNSIMSSFVKKGYFSEAWDVLNQMGEKVCPSDIATYNL 692
Query: 291 VIDGLFKNGRGAAAYTLFCDLKKKGNNFVDGISYSIVILHLCRENMLELALDLVEEMESR 470
+I GL K GR A ++ L K+G ++D + Y+ +I L + ++ L E+M++
Sbjct: 693 IIQGLGKMGRADLASSVLDKLMKQG-GYLDIVMYNTLINALGKAGRIDEVRKLFEQMKTS 751
Query: 471 GFVVDLVTITSLLIALYRLGRWDWTERLMKHIRDGNLVVN 590
G D+VT +L+ + GR + +K + D + N
Sbjct: 752 GINPDVVTYNTLIEVHTKAGRLKDAYKFLKMMLDAGCLPN 791
Score = 62.0 bits (149), Expect = 1e-07
Identities = 45/185 (24%), Positives = 89/185 (48%), Gaps = 1/185 (0%)
Frame = +3
Query: 93 CSSSYLISEALKIFNEMQYNGFRP-NILVYNSILNGLFKSRKLMEACSLFEKMVDEGVRA 269
CS S+ ++ ++ Q G +I + N+ L+ KL AC LFE D GV
Sbjct: 595 CSQSFSLARGQRV----QAKGVESFDIDMVNTFLSIFLAKGKLSVACKLFEIFSDMGVNP 650
Query: 270 TCWTYNIVIDGLFKNGRGAAAYTLFCDLKKKGNNFVDGISYSIVILHLCRENMLELALDL 449
+TYN ++ K G + A+ + + +K D +Y+++I L + +LA +
Sbjct: 651 VSYTYNSIMSSFVKKGYFSEAWDVLNQMGEKVCP-SDIATYNLIIQGLGKMGRADLASSV 709
Query: 450 VEEMESRGFVVDLVTITSLLIALYRLGRWDWTERLMKHIRDGNLVVNVIKWKENMEASLK 629
++++ +G +D+V +L+ AL + GR D +L + ++ + +V+ + +E K
Sbjct: 710 LDKLMKQGGYLDIVMYNTLINALGKAGRIDEVRKLFEQMKTSGINPDVVTYNTLIEVHTK 769
Query: 630 TPQSK 644
+ K
Sbjct: 770 AGRLK 774
Score = 57.0 bits (136), Expect = 4e-06
Identities = 46/159 (28%), Positives = 73/159 (45%)
Frame = +3
Query: 30 ELKSSSGHEPDKFTYRIIIQGCSSSYLISEALKIFNEMQYNGFRPNILVYNSILNGLFKS 209
E+ S G P +TY I+ SEA + N+M +I YN I+ GL K
Sbjct: 641 EIFSDMGVNPVSYTYNSIMSSFVKKGYFSEAWDVLNQMGEKVCPSDIATYNLIIQGLGKM 700
Query: 210 RKLMEACSLFEKMVDEGVRATCWTYNIVIDGLFKNGRGAAAYTLFCDLKKKGNNFVDGIS 389
+ A S+ +K++ +G YN +I+ L K GR LF +K G N D ++
Sbjct: 701 GRADLASSVLDKLMKQGGYLDIVMYNTLINALGKAGRIDEVRKLFEQMKTSGIN-PDVVT 759
Query: 390 YSIVILHLCRENMLELALDLVEEMESRGFVVDLVTITSL 506
Y+ +I + L+ A ++ M G + + VT T+L
Sbjct: 760 YNTLIEVHTKAGRLKDAYKFLKMMLDAGCLPNHVTDTTL 798
>ref|XP_002874971.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297320808|gb|EFH51230.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 802
Score = 322 bits (824), Expect = 6e-86
Identities = 153/224 (68%), Positives = 184/224 (82%)
Frame = +3
Query: 6 KDALIVWEELKSSSGHEPDKFTYRIIIQGCSSSYLISEALKIFNEMQYNGFRPNILVYNS 185
KDALIVW+ELK S GHEPD TYRI+IQGC SY + +A++IF EMQYNGF P+ +VYN
Sbjct: 304 KDALIVWDELKVS-GHEPDNSTYRILIQGCCKSYRMDDAMRIFGEMQYNGFVPDTVVYNC 362
Query: 186 ILNGLFKSRKLMEACSLFEKMVDEGVRATCWTYNIVIDGLFKNGRGAAAYTLFCDLKKKG 365
+L+G K+RK+ EAC LFEKMV EGVRA+CWTYNI+IDGLF+NGR A +TLFCDLKKKG
Sbjct: 363 LLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKG 422
Query: 366 NNFVDGISYSIVILHLCRENMLELALDLVEEMESRGFVVDLVTITSLLIALYRLGRWDWT 545
FVD I++SIV+L LCRE LE A+ LVEEME+RGF VDLVTI+SLLI ++ GRWDW
Sbjct: 423 -QFVDAITFSIVVLQLCREGKLEEAVKLVEEMETRGFTVDLVTISSLLIGFHKQGRWDWK 481
Query: 546 ERLMKHIRDGNLVVNVIKWKENMEASLKTPQSKKKDFTPMFPSK 677
E+LMKH+R+GNLV NV++W +EASLK PQ K KD+TPMFPSK
Sbjct: 482 EKLMKHVREGNLVPNVLRWNAGVEASLKRPQRKDKDYTPMFPSK 525
>ref|XP_003539071.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g01570-like [Glycine max]
Length = 768
Score = 321 bits (823), Expect = 8e-86
Identities = 151/225 (67%), Positives = 189/225 (84%)
Frame = +3
Query: 3 IKDALIVWEELKSSSGHEPDKFTYRIIIQGCSSSYLISEALKIFNEMQYNGFRPNILVYN 182
+ DA+ V+EEL S+ H+PD+FTY +IQ CS +Y + +A++IFN+MQ NGFRP+ L YN
Sbjct: 266 VDDAITVYEELNGSA-HQPDRFTYTNLIQACSKTYRMEDAIRIFNQMQSNGFRPDTLAYN 324
Query: 183 SILNGLFKSRKLMEACSLFEKMVDEGVRATCWTYNIVIDGLFKNGRGAAAYTLFCDLKKK 362
S+L+G FK+ K+MEAC LFEKMV EGVR +CWTYNI+I GLF+NGR AAYT+FCDLKKK
Sbjct: 325 SLLDGHFKATKVMEACQLFEKMVQEGVRPSCWTYNILIHGLFRNGRAEAAYTMFCDLKKK 384
Query: 363 GNNFVDGISYSIVILHLCRENMLELALDLVEEMESRGFVVDLVTITSLLIALYRLGRWDW 542
G FVDGI+YSIV+L LC+E LE AL LVEEMESRGFVVDLVTITSLLI+++R GRWDW
Sbjct: 385 GQ-FVDGITYSIVVLQLCKEGQLEEALQLVEEMESRGFVVDLVTITSLLISIHRHGRWDW 443
Query: 543 TERLMKHIRDGNLVVNVIKWKENMEASLKTPQSKKKDFTPMFPSK 677
T+RLMKHIR+G+L ++V+KWK MEAS+K P KKKD++P+FPSK
Sbjct: 444 TDRLMKHIREGDLALSVLKWKAGMEASMKNPPGKKKDYSPLFPSK 488
Score = 62.8 bits (151), Expect = 7e-08
Identities = 51/203 (25%), Positives = 91/203 (44%), Gaps = 2/203 (0%)
Frame = +3
Query: 42 SSGHEPDKFTYRIIIQGCSSSYLISEALKIFNEMQYNGFRPNILVYNSILNGLFKSRKLM 221
SS DK ++ G SS + E + F ++ + N+ L+ KL
Sbjct: 522 SSSPHMDKLANQVSSTGYSSQMFTPSRGQRVQEKGPDSF--DVDMVNTFLSIFLAKGKLS 579
Query: 222 EACSLFEKMVDEGVRATCWTYNIVIDGLFKNGRGAAAYTLFCDLKKKGNNF--VDGISYS 395
AC LFE D GV +TYN ++ K G A A+ + L + G F D +Y+
Sbjct: 580 LACKLFEIFSDAGVDPVSYTYNSIMSSFVKKGYFAEAWAI---LTEMGEKFCPTDIATYN 636
Query: 396 IVILHLCRENMLELALDLVEEMESRGFVVDLVTITSLLIALYRLGRWDWTERLMKHIRDG 575
++I L + +LA +++ + +G +D+V +L+ AL + R D +L + +R
Sbjct: 637 MIIQGLGKMGRADLASAVLDRLLRQGGYLDIVMYNTLINALGKASRIDEVNKLFEQMRSS 696
Query: 576 NLVVNVIKWKENMEASLKTPQSK 644
+ +V+ + +E K + K
Sbjct: 697 GINPDVVTYNTLIEVHSKAGRLK 719
Score = 60.8 bits (146), Expect = 3e-07
Identities = 44/160 (27%), Positives = 75/160 (46%)
Frame = +3
Query: 111 ISEALKIFNEMQYNGFRPNILVYNSILNGLFKSRKLMEACSLFEKMVDEGVRATCWTYNI 290
+S A K+F G P YNSI++ K EA ++ +M ++ TYN+
Sbjct: 578 LSLACKLFEIFSDAGVDPVSYTYNSIMSSFVKKGYFAEAWAILTEMGEKFCPTDIATYNM 637
Query: 291 VIDGLFKNGRGAAAYTLFCDLKKKGNNFVDGISYSIVILHLCRENMLELALDLVEEMESR 470
+I GL K GR A + L ++G ++D + Y+ +I L + + ++ L E+M S
Sbjct: 638 IIQGLGKMGRADLASAVLDRLLRQG-GYLDIVMYNTLINALGKASRIDEVNKLFEQMRSS 696
Query: 471 GFVVDLVTITSLLIALYRLGRWDWTERLMKHIRDGNLVVN 590
G D+VT +L+ + GR + +K + D N
Sbjct: 697 GINPDVVTYNTLIEVHSKAGRLKDAYKFLKMMLDAGCSPN 736
>ref|XP_002302689.1| predicted protein [Populus trichocarpa] gi|222844415|gb|EEE81962.1|
predicted protein [Populus trichocarpa]
Length = 640
Score = 321 bits (822), Expect = 1e-85
Identities = 156/224 (69%), Positives = 187/224 (83%)
Frame = +3
Query: 3 IKDALIVWEELKSSSGHEPDKFTYRIIIQGCSSSYLISEALKIFNEMQYNGFRPNILVYN 182
+KDA+IV+EELK S GHEPD FTYRI+IQGC SY + +A KIF+EMQYNGF P+ +VYN
Sbjct: 136 VKDAVIVYEELKVS-GHEPDAFTYRILIQGCCKSYQMEDATKIFSEMQYNGFLPDTVVYN 194
Query: 183 SILNGLFKSRKLMEACSLFEKMVDEGVRATCWTYNIVIDGLFKNGRGAAAYTLFCDLKKK 362
S+L+G+FK+RK+MEAC LFEKMV +GVRA+CWTYNI+IDGL KNGR A Y LFC LKKK
Sbjct: 195 SLLDGMFKARKVMEACQLFEKMVQDGVRASCWTYNILIDGLCKNGRAEAGYNLFCGLKKK 254
Query: 363 GNNFVDGISYSIVILHLCRENMLELALDLVEEMESRGFVVDLVTITSLLIALYRLGRWDW 542
G FVD ++YSIV+L LCR+ LE AL LVEEME RGFVVDL+TITSLLIA ++ GRWD
Sbjct: 255 G-QFVDAVTYSIVVLLLCRKGHLEEALHLVEEMEERGFVVDLITITSLLIAFHKQGRWDC 313
Query: 543 TERLMKHIRDGNLVVNVIKWKENMEASLKTPQSKKKDFTPMFPS 674
TERLMKHIRD NL+ NV+KW+ +MEASLK P ++D+TPMFPS
Sbjct: 314 TERLMKHIRDVNLLPNVLKWRADMEASLKNPPRSREDYTPMFPS 357
Score = 64.7 bits (156), Expect = 2e-08
Identities = 48/159 (30%), Positives = 77/159 (48%)
Frame = +3
Query: 30 ELKSSSGHEPDKFTYRIIIQGCSSSYLISEALKIFNEMQYNGFRPNILVYNSILNGLFKS 209
E+ + G +P +TY I+ + A +FNEM P+I YN ++ GL K
Sbjct: 458 EIFTDMGVDPVSYTYNSIMSSFVKKGYFNRAWDVFNEMGEKVCPPDIATYNLVIQGLGKM 517
Query: 210 RKLMEACSLFEKMVDEGVRATCWTYNIVIDGLFKNGRGAAAYTLFCDLKKKGNNFVDGIS 389
+ A S+ +K++ +G YN +ID L K GR A LF +K G N D ++
Sbjct: 518 GRADLASSVLDKLMKQGGYLDIVMYNTLIDALGKAGRIDEANNLFEQMKISGLN-PDVVT 576
Query: 390 YSIVILHLCRENMLELALDLVEEMESRGFVVDLVTITSL 506
Y+I+I + L+ A ++ M G + + VT T+L
Sbjct: 577 YNIMIEVHSKTGRLKDAYKFLKMMLDAGCLPNHVTDTTL 615
Score = 62.8 bits (151), Expect = 7e-08
Identities = 44/160 (27%), Positives = 80/160 (50%)
Frame = +3
Query: 165 NILVYNSILNGLFKSRKLMEACSLFEKMVDEGVRATCWTYNIVIDGLFKNGRGAAAYTLF 344
+I + N+ L+ KL AC LFE D GV +TYN ++ K G A+ +F
Sbjct: 433 DIDMVNTFLSIFLAKGKLSLACKLFEIFTDMGVDPVSYTYNSIMSSFVKKGYFNRAWDVF 492
Query: 345 CDLKKKGNNFVDGISYSIVILHLCRENMLELALDLVEEMESRGFVVDLVTITSLLIALYR 524
++ +K D +Y++VI L + +LA +++++ +G +D+V +L+ AL +
Sbjct: 493 NEMGEKVCP-PDIATYNLVIQGLGKMGRADLASSVLDKLMKQGGYLDIVMYNTLIDALGK 551
Query: 525 LGRWDWTERLMKHIRDGNLVVNVIKWKENMEASLKTPQSK 644
GR D L + ++ L +V+ + +E KT + K
Sbjct: 552 AGRIDEANNLFEQMKISGLNPDVVTYNIMIEVHSKTGRLK 591
Score = 61.6 bits (148), Expect = 2e-07
Identities = 45/160 (28%), Positives = 76/160 (47%)
Frame = +3
Query: 111 ISEALKIFNEMQYNGFRPNILVYNSILNGLFKSRKLMEACSLFEKMVDEGVRATCWTYNI 290
+S A K+F G P YNSI++ K A +F +M ++ TYN+
Sbjct: 450 LSLACKLFEIFTDMGVDPVSYTYNSIMSSFVKKGYFNRAWDVFNEMGEKVCPPDIATYNL 509
Query: 291 VIDGLFKNGRGAAAYTLFCDLKKKGNNFVDGISYSIVILHLCRENMLELALDLVEEMESR 470
VI GL K GR A ++ L K+G ++D + Y+ +I L + ++ A +L E+M+
Sbjct: 510 VIQGLGKMGRADLASSVLDKLMKQG-GYLDIVMYNTLIDALGKAGRIDEANNLFEQMKIS 568
Query: 471 GFVVDLVTITSLLIALYRLGRWDWTERLMKHIRDGNLVVN 590
G D+VT ++ + GR + +K + D + N
Sbjct: 569 GLNPDVVTYNIMIEVHSKTGRLKDAYKFLKMMLDAGCLPN 608