BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00034231
         (569 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containi...   226   1e-57
ref|XP_002532711.1| pentatricopeptide repeat-containing protein,...   212   1e-53
ref|XP_002299387.1| predicted protein [Populus trichocarpa] gi|2...   209   2e-52
ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containi...   206   3e-51
ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago t...   195   4e-48

>ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 896

 Score =  226 bits (576), Expect(2) = 1e-57
 Identities = 113/167 (67%), Positives = 139/167 (83%)
 Frame = +3

Query: 57  SSFTLVSVALACSYVLDGVAGLRLGKEVHGYALRTDHDRKTFTSNALMTMYAKLGRIDDS 236
           SSFTLVSVALACS  L  + GLRLGK++HGY+LR   D+KTFT+NALM MYAKLGR+DDS
Sbjct: 193 SSFTLVSVALACSN-LGVMHGLRLGKQLHGYSLRVG-DQKTFTNNALMAMYAKLGRVDDS 250

Query: 237 RAIFKLFGEKDLVSWNTIISSFSQSGRFYEAMELFRCMVLEKCKPDGVTISTALPACSHL 416
           +A+F+ F ++D+VSWNT+ISSFSQS RF EA+  FR MVLE  + DGVTI++ LPACSHL
Sbjct: 251 KALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHL 310

Query: 417 ELLDVGREIHAYAFRNDDLVRNAFVTGALVDMYCNCKKADVGRKVFD 557
           E LDVG+EIHAY  RN+DL+ N+FV  ALVDMYCNC++ + GR+VFD
Sbjct: 311 ERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFD 357



 Score = 22.7 bits (47), Expect(2) = 1e-57
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +2

Query: 2   WELALDAFRSMGEEGI 49
           WE AL+AFR+M  E +
Sbjct: 175 WEQALEAFRAMQMENM 190



 Score =  108 bits (270), Expect = 6e-22
 Identities = 65/188 (34%), Positives = 97/188 (51%), Gaps = 17/188 (9%)
 Frame = +3

Query: 45  GFLPSSFTLVSVALACSYVLDGVAGLRLGKEVHGYALRTDHDRKTFTSNALMTMYAKLGR 224
           G LP++ T+ SV  AC +           + +HGYA++       +  NALM MY+++G+
Sbjct: 395 GLLPNTTTMASVMPACVHC----EAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGK 450

Query: 225 IDDSRAIFKLFGEKDLVSWNTIISSFSQSGRFYEAMELFRCMVLEK-------------- 362
           +D S  IF     +D VSWNT+I+ +  SGR+  A+ L   M   +              
Sbjct: 451 MDISETIFDSMEVRDRVSWNTMITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEK 510

Query: 363 ---CKPDGVTISTALPACSHLELLDVGREIHAYAFRNDDLVRNAFVTGALVDMYCNCKKA 533
               KP+ +T+ T LP C+ L  +  G+EIHAYA RN  L  +  V  ALVDMY  C   
Sbjct: 511 GGPYKPNAITLMTVLPGCAALAAIAKGKEIHAYAIRN-MLASDITVGSALVDMYAKCGCL 569

Query: 534 DVGRKVFD 557
           ++ R+VF+
Sbjct: 570 NLSRRVFN 577



 Score = 88.6 bits (218), Expect = 7e-16
 Identities = 53/179 (29%), Positives = 94/179 (52%), Gaps = 4/179 (2%)
 Frame = +3

Query: 45  GFLPSSFTLVSVALACSYVLDGVAGLRLGKEVHGYALRTDHDRKTFT-SNALMTMYAKLG 221
           G  P +F   +V  A S    G+  L+ G+++H  A++  +   + T +N L+ MY K G
Sbjct: 87  GARPDNFAFPAVLKAVS----GLQDLKTGEQIHAAAVKFGYGSSSVTVANTLVNMYGKCG 142

Query: 222 RIDDSRAIFKLFGEKDLVSWNTIISSFSQSGRFYEAMELFRCMVLEKCKPDGVTISTALP 401
            I D   +F    ++D VSWN+ I++  +  ++ +A+E FR M +E  +    T+ +   
Sbjct: 143 GIGDVCKVFDRITDRDQVSWNSFIAALCRFEKWEQALEAFRAMQMENMELSSFTLVSVAL 202

Query: 402 ACSHLEL---LDVGREIHAYAFRNDDLVRNAFVTGALVDMYCNCKKADVGRKVFDGAVD 569
           ACS+L +   L +G+++H Y+ R  D  +  F   AL+ MY    + D  + +F+  VD
Sbjct: 203 ACSNLGVMHGLRLGKQLHGYSLRVGD--QKTFTNNALMAMYAKLGRVDDSKALFESFVD 259



 Score = 86.3 bits (212), Expect = 3e-15
 Identities = 55/170 (32%), Positives = 88/170 (51%), Gaps = 6/170 (3%)
 Frame = +3

Query: 66  TLVSVALACSYVLDGVAGLRLGKEVHGYALRT-DHDRKTFTSNALMTMYAKLGRIDDSRA 242
           T+ SV  ACS++      L +GKE+H Y LR  D    +F  +AL+ MY    +++  R 
Sbjct: 299 TIASVLPACSHL----ERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRR 354

Query: 243 IFKLFGEKDLVSWNTIISSFSQSGRFYEAMELFRCMV-LEKCKPDGVTISTALPACSHLE 419
           +F     + +  WN +IS ++++G   +A+ LF  M+ +    P+  T+++ +PAC H E
Sbjct: 355 VFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCE 414

Query: 420 LLDVGREIHAYA----FRNDDLVRNAFVTGALVDMYCNCKKADVGRKVFD 557
                  IH YA    F+ D  V+N     AL+DMY    K D+   +FD
Sbjct: 415 AFSNKESIHGYAVKLGFKEDRYVQN-----ALMDMYSRMGKMDISETIFD 459



 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 49/145 (33%), Positives = 79/145 (54%), Gaps = 5/145 (3%)
 Frame = +3

Query: 48  FLPSSFTLVSVALACSYVLDGVAGLRLGKEVHGYALRTDHDRKTFTSNALMTMYAKLGRI 227
           + P++ TL++V   C+     +A +  GKE+H YA+R          +AL+ MYAK G +
Sbjct: 514 YKPNAITLMTVLPGCA----ALAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCL 569

Query: 228 DDSRAIFKLFGEKDLVSWNTIISSFSQSGRFYEAMELFRCMVLE-----KCKPDGVTIST 392
           + SR +F     K++++WN +I +    G+  EA+ELF+ MV E     + KP+ VT  T
Sbjct: 570 NLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFIT 629

Query: 393 ALPACSHLELLDVGREIHAYAFRND 467
              ACSH  L+  G  +  Y  ++D
Sbjct: 630 VFAACSHSGLISEGLNLF-YRMKHD 653


>ref|XP_002532711.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223527557|gb|EEF29678.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 679

 Score =  212 bits (539), Expect(2) = 1e-53
 Identities = 105/172 (61%), Positives = 133/172 (77%)
 Frame = +3

Query: 54  PSSFTLVSVALACSYVLDGVAGLRLGKEVHGYALRTDHDRKTFTSNALMTMYAKLGRIDD 233
           PSSFTLVS  +ACS  L    GLRLGK++HGY  R  H   TFT+NALMTMYA LGR+DD
Sbjct: 177 PSSFTLVSPVIACSN-LRKHEGLRLGKQIHGYCFRNGH-WSTFTNNALMTMYANLGRLDD 234

Query: 234 SRAIFKLFGEKDLVSWNTIISSFSQSGRFYEAMELFRCMVLEKCKPDGVTISTALPACSH 413
           ++ +FKLF +++L+SWNT+ISSFSQ+ RF EA+   R MVLE  KPDGVT+++ LPACS+
Sbjct: 235 AKFLFKLFEDRNLISWNTMISSFSQNERFVEALMSLRYMVLEGVKPDGVTLASVLPACSY 294

Query: 414 LELLDVGREIHAYAFRNDDLVRNAFVTGALVDMYCNCKKADVGRKVFDGAVD 569
           LE+L  G+EIHAYA R+ DL+ N+FV  ALVDMYCNC +   GR+VFDG ++
Sbjct: 295 LEMLGTGKEIHAYALRSGDLIENSFVGSALVDMYCNCGQVGSGRRVFDGILE 346



 Score = 23.5 bits (49), Expect(2) = 1e-53
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +2

Query: 2   WELALDAFRSMGEEGI 49
           WELAL+AFR M  E +
Sbjct: 160 WELALEAFRFMLAEDL 175



 Score =  105 bits (262), Expect = 5e-21
 Identities = 63/191 (32%), Positives = 102/191 (53%), Gaps = 13/191 (6%)
 Frame = +3

Query: 24  LEVWGRRGFLPSSFTLVSVALACSYVLDGVAGLRLGKEVHGYALRTDHDRKTFTSNALMT 203
           +E+    G  P++ T+ S+  A +      +     + +HGY ++ D +R  +  NALM 
Sbjct: 373 IEMVAVAGLCPNTTTMASIVPASARCESFFSK----ESIHGYVIKRDLERDRYVQNALMD 428

Query: 204 MYAKLGRIDDSRAIFKLFGEKDLVSWNTIISSFSQSGRFYEAMELFRCMV---------- 353
           MY+++ +++ S+ IF     +D+VSWNT+I+ +  SG + +A+ +   M           
Sbjct: 429 MYSRMRKMEISKTIFDSMEVRDIVSWNTMITGYVISGCYNDALLMLHEMQHANEGINKHD 488

Query: 354 --LEKC-KPDGVTISTALPACSHLELLDVGREIHAYAFRNDDLVRNAFVTGALVDMYCNC 524
              + C KP+ +T+ T LP C+ L  L  G+EIHAYA RN  L     V  ALVDMY  C
Sbjct: 489 GDKQACFKPNSITLMTVLPGCASLAALAKGKEIHAYAVRN-ALASEVTVGSALVDMYAKC 547

Query: 525 KKADVGRKVFD 557
              ++ R+VFD
Sbjct: 548 GCLNLSRRVFD 558



 Score = 99.0 bits (245), Expect = 5e-19
 Identities = 57/174 (32%), Positives = 95/174 (54%), Gaps = 4/174 (2%)
 Frame = +3

Query: 45  GFLPSSFTLVSVALACSYVLDGVAGLRLGKEVHGYALRTDHDRKTFT-SNALMTMYAKLG 221
           G  P S+    V  A +    G+  L LGK++H + ++  ++  +   +N+L+  Y K  
Sbjct: 72  GVSPDSYAFPVVLKAVT----GLQDLNLGKQIHAHVVKYGYESSSVAIANSLVNFYGKCS 127

Query: 222 RIDDSRAIFKLFGEKDLVSWNTIISSFSQSGRFYEAMELFRCMVLEKCKPDGVTISTALP 401
            +DD   +F    E+DLVSWN++IS+F ++  +  A+E FR M+ E  +P   T+ + + 
Sbjct: 128 ELDDVYKVFDRINERDLVSWNSLISAFCRAQEWELALEAFRFMLAEDLEPSSFTLVSPVI 187

Query: 402 ACSHL---ELLDVGREIHAYAFRNDDLVRNAFVTGALVDMYCNCKKADVGRKVF 554
           ACS+L   E L +G++IH Y FRN     + F   AL+ MY N  + D  + +F
Sbjct: 188 ACSNLRKHEGLRLGKQIHGYCFRNGHW--STFTNNALMTMYANLGRLDDAKFLF 239



 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 64/186 (34%), Positives = 98/186 (52%), Gaps = 2/186 (1%)
 Frame = +3

Query: 6   SLRWMRLEVWGRRGFLPSSFTLVSVALACSYVLDGVAGLRLGKEVHGYALRT-DHDRKTF 182
           SLR+M LE     G  P   TL SV  ACSY+      L  GKE+H YALR+ D    +F
Sbjct: 269 SLRYMVLE-----GVKPDGVTLASVLPACSYL----EMLGTGKEIHAYALRSGDLIENSF 319

Query: 183 TSNALMTMYAKLGRIDDSRAIFKLFGEKDLVSWNTIISSFSQSGRFYEAMELFRCMV-LE 359
             +AL+ MY   G++   R +F    E+    WN +I+ ++Q+    +A+ LF  MV + 
Sbjct: 320 VGSALVDMYCNCGQVGSGRRVFDGILERKTGLWNAMIAGYAQNEHDEKALMLFIEMVAVA 379

Query: 360 KCKPDGVTISTALPACSHLELLDVGREIHAYAFRNDDLVRNAFVTGALVDMYCNCKKADV 539
              P+  T+++ +PA +  E       IH Y  +  DL R+ +V  AL+DMY   +K ++
Sbjct: 380 GLCPNTTTMASIVPASARCESFFSKESIHGYVIKR-DLERDRYVQNALMDMYSRMRKMEI 438

Query: 540 GRKVFD 557
            + +FD
Sbjct: 439 SKTIFD 444



 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 49/137 (35%), Positives = 78/137 (56%), Gaps = 5/137 (3%)
 Frame = +3

Query: 48  FLPSSFTLVSVALACSYVLDGVAGLRLGKEVHGYALRTDHDRKTFTSNALMTMYAKLGRI 227
           F P+S TL++V   C+     +A L  GKE+H YA+R     +    +AL+ MYAK G +
Sbjct: 495 FKPNSITLMTVLPGCA----SLAALAKGKEIHAYAVRNALASEVTVGSALVDMYAKCGCL 550

Query: 228 DDSRAIFKLFGEKDLVSWNTIISSFSQSGRFYEAMELFRCMVLE-----KCKPDGVTIST 392
           + SR +F     K++++WN I+ ++   G   EA+ELF+ MV +     + KP  VT+  
Sbjct: 551 NLSRRVFDQMPIKNVITWNVIVMAYGMHGNGEEALELFKDMVAKGDNVGEVKPTEVTMIA 610

Query: 393 ALPACSHLELLDVGREI 443
            L ACSH  ++D G ++
Sbjct: 611 ILAACSHSGMVDEGLKL 627


>ref|XP_002299387.1| predicted protein [Populus trichocarpa] gi|222846645|gb|EEE84192.1|
           predicted protein [Populus trichocarpa]
          Length = 814

 Score =  209 bits (533), Expect(2) = 2e-52
 Identities = 106/175 (60%), Positives = 133/175 (76%)
 Frame = +3

Query: 45  GFLPSSFTLVSVALACSYVLDGVAGLRLGKEVHGYALRTDHDRKTFTSNALMTMYAKLGR 224
           GF PSSFTLVS+ALACS  L    GL LGK++HG   R  H R TF++NALM MYAKLGR
Sbjct: 108 GFEPSSFTLVSMALACSN-LRKRDGLWLGKQIHGCCFRKGHWR-TFSNNALMAMYAKLGR 165

Query: 225 IDDSRAIFKLFGEKDLVSWNTIISSFSQSGRFYEAMELFRCMVLEKCKPDGVTISTALPA 404
           +DD++++  LF ++DLV+WN++ISSFSQ+ RF EA+   R MVLE  KPDGVT ++ LPA
Sbjct: 166 LDDAKSLLVLFEDRDLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPA 225

Query: 405 CSHLELLDVGREIHAYAFRNDDLVRNAFVTGALVDMYCNCKKADVGRKVFDGAVD 569
           CSHL+LL  G+EIHAYA R DD++ N+FV  ALVDMYCNC + + GR VFD  +D
Sbjct: 226 CSHLDLLRTGKEIHAYALRTDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLD 280



 Score = 21.9 bits (45), Expect(2) = 2e-52
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +2

Query: 2   WELALDAFRSMGEEG 46
           WE+A+ AFR M  EG
Sbjct: 94  WEVAIKAFRLMLMEG 108



 Score =  105 bits (261), Expect = 7e-21
 Identities = 68/194 (35%), Positives = 102/194 (52%), Gaps = 16/194 (8%)
 Frame = +3

Query: 24  LEVWGRRGFLPSSFTLVSVALACSYVLDGVAGLRLGKEVHGYALRTDHDRKTFTSNALMT 203
           +E+    G   ++ T+ S+  A  YV     G+   + +HGY ++   +   +  NAL+ 
Sbjct: 307 IEMEAAAGLYSNATTMSSIVPA--YVR--CEGISRKEGIHGYVIKRGLETNRYLQNALID 362

Query: 204 MYAKLGRIDDSRAIFKLFGEKDLVSWNTIISSFSQSGRFYEAMELFRCM--VLEKC---- 365
           MY+++G I  S+ IF    ++D+VSWNTII+S+   GR  +A+ L   M  + EK     
Sbjct: 363 MYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDG 422

Query: 366 ----------KPDGVTISTALPACSHLELLDVGREIHAYAFRNDDLVRNAFVTGALVDMY 515
                     KP+ +T+ T LP C+ L  L  G+EIHAYA RN  L     V  ALVDMY
Sbjct: 423 DYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHAYAIRN-LLASQVTVGSALVDMY 481

Query: 516 CNCKKADVGRKVFD 557
             C   ++ R+VFD
Sbjct: 482 AKCGCLNLARRVFD 495



 Score = 85.9 bits (211), Expect = 4e-15
 Identities = 59/190 (31%), Positives = 93/190 (48%), Gaps = 2/190 (1%)
 Frame = +3

Query: 6   SLRWMRLEVWGRRGFLPSSFTLVSVALACSYVLDGVAGLRLGKEVHGYALRTDHD-RKTF 182
           +L ++RL V    G  P   T  SV  ACS++      LR GKE+H YALRTD     +F
Sbjct: 200 ALMFLRLMVL--EGVKPDGVTFASVLPACSHL----DLLRTGKEIHAYALRTDDVIENSF 253

Query: 183 TSNALMTMYAKLGRIDDSRAIFKLFGEKDLVSWNTIISSFSQSGRFYEAMELFRCM-VLE 359
             +AL+ MY   G+++  R +F    ++ +  WN +I+ ++QS    +A+ LF  M    
Sbjct: 254 VGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKALMLFIEMEAAA 313

Query: 360 KCKPDGVTISTALPACSHLELLDVGREIHAYAFRNDDLVRNAFVTGALVDMYCNCKKADV 539
               +  T+S+ +PA    E +     IH Y  +   L  N ++  AL+DMY        
Sbjct: 314 GLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKR-GLETNRYLQNALIDMYSRMGDIKT 372

Query: 540 GRKVFDGAVD 569
            +++FD   D
Sbjct: 373 SKRIFDSMED 382



 Score = 82.4 bits (202), Expect = 5e-14
 Identities = 54/171 (31%), Positives = 87/171 (50%), Gaps = 7/171 (4%)
 Frame = +3

Query: 45  GFLPSSFTLVSVALACSYVLDGVAGLRLGKEVHGYALRTDHDRKTFTS----NALMTMYA 212
           GF P +F   +V  A +    G+  L LGK++H +  +  +   +F+S    N L+ MY 
Sbjct: 5   GFSPDNFAFPAVLKAVA----GIQELYLGKQIHAHVFKFGYG--SFSSVTIDNTLVNMYG 58

Query: 213 KLGRIDDSRAIFKLFGEKDLVSWNTIISSFSQSGRFYEAMELFRCMVLEKCKPDGVTIST 392
           K G + D+  +F    E+D VSWN+IIS+  +   +  A++ FR M++E  +P   T+ +
Sbjct: 59  KCGGLGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVS 118

Query: 393 ALPACSHLELLD---VGREIHAYAFRNDDLVRNAFVTGALVDMYCNCKKAD 536
              ACS+L   D   +G++IH   FR        F   AL+ MY    + D
Sbjct: 119 MALACSNLRKRDGLWLGKQIHGCCFRKGHW--RTFSNNALMAMYAKLGRLD 167



 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 45/134 (33%), Positives = 74/134 (55%), Gaps = 5/134 (3%)
 Frame = +3

Query: 48  FLPSSFTLVSVALACSYVLDGVAGLRLGKEVHGYALRTDHDRKTFTSNALMTMYAKLGRI 227
           F P+S TL++V   C+     ++ L  GKE+H YA+R     +    +AL+ MYAK G +
Sbjct: 432 FKPNSITLMTVLPGCA----SLSALAKGKEIHAYAIRNLLASQVTVGSALVDMYAKCGCL 487

Query: 228 DDSRAIFKLFGEKDLVSWNTIISSFSQSGRFYEAMELFRCMVLE-----KCKPDGVTIST 392
           + +R +F     +++++WN II ++   G+  E++ELF  MV E     + KP  VT   
Sbjct: 488 NLARRVFDQMPIRNVITWNVIIMAYGMHGKGKESLELFEDMVAEGAKGGEVKPTEVTFIA 547

Query: 393 ALPACSHLELLDVG 434
              +CSH  ++D G
Sbjct: 548 LFASCSHSGMVDEG 561


>ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 1135

 Score =  206 bits (523), Expect = 3e-51
 Identities = 103/171 (60%), Positives = 131/171 (76%)
 Frame = +3

Query: 54  PSSFTLVSVALACSYVLDGVAGLRLGKEVHGYALRTDHDRKTFTSNALMTMYAKLGRIDD 233
           P+SFTLVSVA ACS+V  GV   RLGK+VH Y LR   D +T+T+NAL+TMYA+LGR++D
Sbjct: 431 PTSFTLVSVAHACSHVRGGV---RLGKQVHAYTLRNG-DLRTYTNNALVTMYARLGRVND 486

Query: 234 SRAIFKLFGEKDLVSWNTIISSFSQSGRFYEAMELFRCMVLEKCKPDGVTISTALPACSH 413
           ++A+F +F  KDLVSWNT+ISS SQ+ RF EA+     M+++  +PDGVT+++ LPACS 
Sbjct: 487 AKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVRPDGVTLASVLPACSQ 546

Query: 414 LELLDVGREIHAYAFRNDDLVRNAFVTGALVDMYCNCKKADVGRKVFDGAV 566
           LE L +GREIH YA RN DL+ N+FV  ALVDMYCNCK+   GR VFDG V
Sbjct: 547 LERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGRLVFDGVV 597



 Score =  103 bits (258), Expect = 2e-20
 Identities = 66/196 (33%), Positives = 100/196 (51%), Gaps = 18/196 (9%)
 Frame = +3

Query: 24   LEVWGRRGFLPSSFTLVSVALACSYVLDGVAGLRLGKEVHGYALRTDHDRKTFTSNALMT 203
            +E+     F P++ T  SV  AC  V   V   + G  +HGY ++    +  +  NALM 
Sbjct: 625  VEMISESEFCPNATTFASVLPAC--VRCKVFSDKEG--IHGYIVKRGFGKDKYVQNALMD 680

Query: 204  MYAKLGRIDDSRAIFKLFGEKDLVSWNTIISSFSQSGRFYEAMELFRCMVLEK------- 362
            MY+++GR++ S+ IF    ++D+VSWNT+I+     GR+ +A+ L   M   +       
Sbjct: 681  MYSRMGRVEISKTIFGRMNKRDIVSWNTMITGCIVCGRYDDALNLLHEMQRRQGEDGSDT 740

Query: 363  -----------CKPDGVTISTALPACSHLELLDVGREIHAYAFRNDDLVRNAFVTGALVD 509
                        KP+ VT+ T LP C+ L  L  G+EIHAYA +   L  +  V  ALVD
Sbjct: 741  FVDYEDDGGVPFKPNSVTLMTVLPGCAALAALGKGKEIHAYAVK-QKLAMDVAVGSALVD 799

Query: 510  MYCNCKKADVGRKVFD 557
            MY  C   ++  +VFD
Sbjct: 800  MYAKCGCLNLASRVFD 815



 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 54/175 (30%), Positives = 90/175 (51%), Gaps = 6/175 (3%)
 Frame = +3

Query: 54  PSSFTLVSVALACSYVLDGVAGLRLGKEVHGYALRTDH--DRKTFTSNALMTMYAKLGRI 227
           P +F   +V  A + V D    L LGK++H +  +  H        +N+L+ MY K G +
Sbjct: 328 PDNFAFPAVLKAAAAVHD----LCLGKQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDL 383

Query: 228 DDSRAIFKLFGEKDLVSWNTIISSFSQSGRFYEAMELFRCMVLEKCKPDGVTISTALPAC 407
             +R +F    ++D VSWN++I++  +   +  ++ LFR M+ E   P   T+ +   AC
Sbjct: 384 TAARQVFDDIPDRDHVSWNSMIATLCRFEEWELSLHLFRLMLSENVDPTSFTLVSVAHAC 443

Query: 408 SHLE-LLDVGREIHAYAFRNDDLVRNAFVTGALVDMYCNCKKADVGRK---VFDG 560
           SH+   + +G+++HAY  RN DL    +   ALV MY    + +  +    VFDG
Sbjct: 444 SHVRGGVRLGKQVHAYTLRNGDL--RTYTNNALVTMYARLGRVNDAKALFGVFDG 496



 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 49/172 (28%), Positives = 85/172 (49%), Gaps = 2/172 (1%)
 Frame = +3

Query: 45   GFLPSSFTLVSVALACSYVLDGVAGLRLGKEVHGYALRT-DHDRKTFTSNALMTMYAKLG 221
            G  P   TL SV  ACS +      LR+G+E+H YALR  D    +F   AL+ MY    
Sbjct: 529  GVRPDGVTLASVLPACSQL----ERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCK 584

Query: 222  RIDDSRAIFKLFGEKDLVSWNTIISSFSQSGRFYEAMELFRCMVLE-KCKPDGVTISTAL 398
            +    R +F     + +  WN +++ ++++    +A+ LF  M+ E +  P+  T ++ L
Sbjct: 585  QPKKGRLVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVL 644

Query: 399  PACSHLELLDVGREIHAYAFRNDDLVRNAFVTGALVDMYCNCKKADVGRKVF 554
            PAC   ++      IH Y  +     ++ +V  AL+DMY    + ++ + +F
Sbjct: 645  PACVRCKVFSDKEGIHGYIVKR-GFGKDKYVQNALMDMYSRMGRVEISKTIF 695



 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 48/150 (32%), Positives = 78/150 (52%), Gaps = 6/150 (4%)
 Frame = +3

Query: 3    GSLRWMRLEVWGRRGFLPSSFTLVSVALACSYVLDGVAGLRLGKEVHGYALRTDHDRKTF 182
            GS  ++  E  G   F P+S TL++V   C+     +A L  GKE+H YA++        
Sbjct: 737  GSDTFVDYEDDGGVPFKPNSVTLMTVLPGCA----ALAALGKGKEIHAYAVKQKLAMDVA 792

Query: 183  TSNALMTMYAKLGRIDDSRAIFKLFGEKDLVSWNTIISSFSQSGRFYEAMELFRCMVL-- 356
              +AL+ MYAK G ++ +  +F     +++++WN +I ++   G+  EA+ELFR M    
Sbjct: 793  VGSALVDMYAKCGCLNLASRVFDQMPIRNVITWNVLIMAYGMHGKGEEALELFRIMTAGG 852

Query: 357  ----EKCKPDGVTISTALPACSHLELLDVG 434
                E  +P+ VT      ACSH  ++D G
Sbjct: 853  GSNREVIRPNEVTYIAIFAACSHSGMVDEG 882


>ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355483916|gb|AES65119.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 874

 Score =  195 bits (496), Expect = 4e-48
 Identities = 97/169 (57%), Positives = 129/169 (76%)
 Frame = +3

Query: 54  PSSFTLVSVALACSYVLDGVAGLRLGKEVHGYALRTDHDRKTFTSNALMTMYAKLGRIDD 233
           P+SFTLVSVA ACS +++G   L LGK+VH + LR   D +TFT+NAL+TMYAKLGR+ +
Sbjct: 184 PTSFTLVSVAHACSNLING---LLLGKQVHAFVLRNG-DWRTFTNNALVTMYAKLGRVYE 239

Query: 234 SRAIFKLFGEKDLVSWNTIISSFSQSGRFYEAMELFRCMVLEKCKPDGVTISTALPACSH 413
           ++ +F +F +KDLVSWNTIISS SQ+ RF EA+     M+    +P+GVT+++ LPACSH
Sbjct: 240 AKTLFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSH 299

Query: 414 LELLDVGREIHAYAFRNDDLVRNAFVTGALVDMYCNCKKADVGRKVFDG 560
           LE+L  G+EIHA+   N+DL+ N+FV  ALVDMYCNCK+ + GR VFDG
Sbjct: 300 LEMLGCGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDG 348



 Score =  102 bits (254), Expect = 4e-20
 Identities = 67/190 (35%), Positives = 97/190 (51%), Gaps = 19/190 (10%)
 Frame = +3

Query: 45  GFLPSSFTLVSVALACSYVLDGVAGLRLGKE-VHGYALRTDHDRKTFTSNALMTMYAKLG 221
           G  P+S TL SV  AC           L KE +H   ++   ++  +  NALM MY+++G
Sbjct: 385 GLSPNSVTLSSVLPACVRCESF-----LDKEGIHSCVVKWGFEKDKYVQNALMDMYSRMG 439

Query: 222 RIDDSRAIFKLFGEKDLVSWNTIISSFSQSGRFYEAMELFRCMVLEKC------------ 365
           RI+ +R+IF     KD+VSWNT+I+ +   GR  +A+ L   M   +             
Sbjct: 440 RIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQAEHRINTFDDYED 499

Query: 366 ------KPDGVTISTALPACSHLELLDVGREIHAYAFRNDDLVRNAFVTGALVDMYCNCK 527
                 KP+ VT+ T LP C+ L  L  G+EIHAYA +   L ++  V  ALVDMY  C 
Sbjct: 500 NKNFPLKPNSVTLMTVLPGCAALAALGKGKEIHAYAVK-QMLSKDVAVGSALVDMYAKCG 558

Query: 528 KADVGRKVFD 557
             ++ R VF+
Sbjct: 559 CLNLSRTVFE 568



 Score = 92.0 bits (227), Expect = 6e-17
 Identities = 56/172 (32%), Positives = 88/172 (51%), Gaps = 1/172 (0%)
 Frame = +3

Query: 45  GFLPSSFTLVSVALACSYVLDGVAGLRLGKEVHGYALRTDHDRKTFTSNALMTMYAKLGR 224
           G  P +F   +V  A +    G+  L LGK++H +  +      T   N+L+ MY K G 
Sbjct: 80  GVPPDNFAFPAVLKATA----GIQDLNLGKQLHAHVFKFGQALPTAVPNSLVNMYGKCGD 135

Query: 225 IDDSRAIFKLFGEKDLVSWNTIISSFSQSGRFYEAMELFRCMVLEKCKPDGVTISTALPA 404
           ID +R +F     +D VSWN++I++  +   +  A+ LFR M+LE   P   T+ +   A
Sbjct: 136 IDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTSFTLVSVAHA 195

Query: 405 CSHL-ELLDVGREIHAYAFRNDDLVRNAFVTGALVDMYCNCKKADVGRKVFD 557
           CS+L   L +G+++HA+  RN D     F   ALV MY    +    + +FD
Sbjct: 196 CSNLINGLLLGKQVHAFVLRNGDW--RTFTNNALVTMYAKLGRVYEAKTLFD 245



 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 59/183 (32%), Positives = 89/183 (48%), Gaps = 6/183 (3%)
 Frame = +3

Query: 24  LEVWGRRGFLPSSFTLVSVALACSYVLDGVAGLRLGKEVHGYAL-RTDHDRKTFTSNALM 200
           L V  + G  P+  TL SV  ACS++      L  GKE+H + L   D    +F   AL+
Sbjct: 275 LHVMLQSGVRPNGVTLASVLPACSHL----EMLGCGKEIHAFVLMNNDLIENSFVGCALV 330

Query: 201 TMYAKLGRIDDSRAIFKLFGEKDLVSWNTIISSFSQSGRFYEAMELFRCMVLE-KCKPDG 377
            MY    + +  R +F     + +  WN +I+ + ++   YEA+ELF  MV E    P+ 
Sbjct: 331 DMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNS 390

Query: 378 VTISTALPACSHLELLDVGREIHA----YAFRNDDLVRNAFVTGALVDMYCNCKKADVGR 545
           VT+S+ LPAC   E       IH+    + F  D  V+N     AL+DMY    + ++ R
Sbjct: 391 VTLSSVLPACVRCESFLDKEGIHSCVVKWGFEKDKYVQN-----ALMDMYSRMGRIEIAR 445

Query: 546 KVF 554
            +F
Sbjct: 446 SIF 448



 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 43/132 (32%), Positives = 75/132 (56%), Gaps = 5/132 (3%)
 Frame = +3

Query: 54  PSSFTLVSVALACSYVLDGVAGLRLGKEVHGYALRTDHDRKTFTSNALMTMYAKLGRIDD 233
           P+S TL++V   C+     +A L  GKE+H YA++    +     +AL+ MYAK G ++ 
Sbjct: 507 PNSVTLMTVLPGCA----ALAALGKGKEIHAYAVKQMLSKDVAVGSALVDMYAKCGCLNL 562

Query: 234 SRAIFKLFGEKDLVSWNTIISSFSQSGRFYEAMELFRCMVLE-----KCKPDGVTISTAL 398
           SR +F+    +++++WN +I ++   G+  EA++LFR MV E     + +P+ VT     
Sbjct: 563 SRTVFEQMSVRNVITWNVLIMAYGMHGKGEEALKLFRRMVEEGDNNREIRPNEVTYIAIF 622

Query: 399 PACSHLELLDVG 434
            + SH  ++D G
Sbjct: 623 ASLSHSGMVDEG 634