BLASTX nr result

ID: Lithospermum22_contig00034224 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00034224
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15417.3| unnamed protein product [Vitis vinifera]               40   8e-07
ref|XP_002274270.2| PREDICTED: histone deacetylase 15-like [Viti...    40   8e-07
ref|XP_004139132.1| PREDICTED: histone deacetylase 15-like [Cucu...    41   1e-06
ref|XP_002318567.1| hypothetical protein POPTRDRAFT_421550 [Popu...    42   1e-06
ref|XP_004154699.1| PREDICTED: histone deacetylase 15-like [Cucu...    41   1e-06

>emb|CBI15417.3| unnamed protein product [Vitis vinifera]
          Length = 697

 Score = 39.7 bits (91), Expect(2) = 8e-07
 Identities = 21/35 (60%), Positives = 24/35 (68%)
 Frame = -3

Query: 343 DSYVTFSSGKMLVILEGGSNLRWISSSISEVFKVI 239
           D     S GK+LVILEGG NLR ISSS + V KV+
Sbjct: 569 DMLNVLSGGKLLVILEGGYNLRSISSSATAVIKVL 603



 Score = 38.1 bits (87), Expect(2) = 8e-07
 Identities = 15/38 (39%), Positives = 25/38 (65%)
 Frame = -1

Query: 168 MVRVLIGDCPRSNMDNVLPFKHVMEIIEDVLKYQADFW 55
           +++VL+G+ P   +DN LP K  +  + +VLK Q +FW
Sbjct: 599 VIKVLLGETPGCELDNCLPSKSGLRTVLEVLKIQMNFW 636


>ref|XP_002274270.2| PREDICTED: histone deacetylase 15-like [Vitis vinifera]
          Length = 621

 Score = 39.7 bits (91), Expect(2) = 8e-07
 Identities = 21/35 (60%), Positives = 24/35 (68%)
 Frame = -3

Query: 343 DSYVTFSSGKMLVILEGGSNLRWISSSISEVFKVI 239
           D     S GK+LVILEGG NLR ISSS + V KV+
Sbjct: 493 DMLNVLSGGKLLVILEGGYNLRSISSSATAVIKVL 527



 Score = 38.1 bits (87), Expect(2) = 8e-07
 Identities = 15/38 (39%), Positives = 25/38 (65%)
 Frame = -1

Query: 168 MVRVLIGDCPRSNMDNVLPFKHVMEIIEDVLKYQADFW 55
           +++VL+G+ P   +DN LP K  +  + +VLK Q +FW
Sbjct: 523 VIKVLLGETPGCELDNCLPSKSGLRTVLEVLKIQMNFW 560


>ref|XP_004139132.1| PREDICTED: histone deacetylase 15-like [Cucumis sativus]
          Length = 600

 Score = 40.8 bits (94), Expect(2) = 1e-06
 Identities = 21/31 (67%), Positives = 24/31 (77%)
 Frame = -3

Query: 331 TFSSGKMLVILEGGSNLRWISSSISEVFKVI 239
           T S GK+LVILEGG NLR ISSS + V KV+
Sbjct: 473 TVSGGKLLVILEGGYNLRSISSSATAVIKVL 503



 Score = 36.2 bits (82), Expect(2) = 1e-06
 Identities = 17/53 (32%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
 Frame = -1

Query: 168 MVRVLIGDCPRSNMDNVLPFKHVMEIIEDVLKYQADFWD-LGDSLQLIRNIIE 13
           +++VL+G+ P  ++D+ LP    M+ + DVL  Q +FW  L  S   +++++E
Sbjct: 499 VIKVLLGESPECDLDDHLPSSAGMKTVLDVLAIQKNFWPVLESSFSKLQSMLE 551


>ref|XP_002318567.1| hypothetical protein POPTRDRAFT_421550 [Populus trichocarpa]
           gi|222859240|gb|EEE96787.1| hypothetical protein
           POPTRDRAFT_421550 [Populus trichocarpa]
          Length = 503

 Score = 41.6 bits (96), Expect(2) = 1e-06
 Identities = 21/35 (60%), Positives = 25/35 (71%)
 Frame = -3

Query: 343 DSYVTFSSGKMLVILEGGSNLRWISSSISEVFKVI 239
           D   T + GK+LVILEGG NLR ISSS + V KV+
Sbjct: 380 DMLYTLTGGKLLVILEGGYNLRSISSSATSVIKVL 414



 Score = 35.4 bits (80), Expect(2) = 1e-06
 Identities = 15/44 (34%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
 Frame = -1

Query: 168 MVRVLIGDCPRSNMDNVLPFKHVMEIIEDVLKYQADFW-DLGDS 40
           +++VL+G+ P S + N+ P +  ++ + +V+K Q +FW  LG S
Sbjct: 410 VIKVLLGEGPGSELGNIAPSRAGLQTVLEVMKIQMNFWPSLGSS 453


>ref|XP_004154699.1| PREDICTED: histone deacetylase 15-like [Cucumis sativus]
          Length = 176

 Score = 40.8 bits (94), Expect(2) = 1e-06
 Identities = 21/31 (67%), Positives = 24/31 (77%)
 Frame = -3

Query: 331 TFSSGKMLVILEGGSNLRWISSSISEVFKVI 239
           T S GK+LVILEGG NLR ISSS + V KV+
Sbjct: 51  TVSGGKLLVILEGGYNLRSISSSATAVIKVL 81



 Score = 36.2 bits (82), Expect(2) = 1e-06
 Identities = 17/53 (32%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
 Frame = -1

Query: 168 MVRVLIGDCPRSNMDNVLPFKHVMEIIEDVLKYQADFWD-LGDSLQLIRNIIE 13
           +++VL+G+ P  ++D+ LP    M+ + DVL  Q +FW  L  S   +++++E
Sbjct: 77  VIKVLLGESPECDLDDHLPSSAGMKTVLDVLAIQKNFWPVLESSFSKLQSMLE 129


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