BLASTX nr result

ID: Lithospermum22_contig00034201 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00034201
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322376.1| predicted protein [Populus trichocarpa] gi|2...   146   1e-33
ref|XP_002528370.1| pentatricopeptide repeat-containing protein,...   145   3e-33
ref|XP_004157755.1| PREDICTED: uncharacterized protein LOC101223...   140   8e-32
ref|XP_004145475.1| PREDICTED: pentatricopeptide repeat-containi...   140   8e-32
ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containi...   140   8e-32

>ref|XP_002322376.1| predicted protein [Populus trichocarpa] gi|222869372|gb|EEF06503.1|
           predicted protein [Populus trichocarpa]
          Length = 715

 Score =  146 bits (369), Expect = 1e-33
 Identities = 66/105 (62%), Positives = 89/105 (84%)
 Frame = -3

Query: 351 MLDKGLSPCEVTRITLAHEYCKKNEPSIAFALLDRLDNRLWVRTIKTLIRKLCSEKKVEM 172
           M+DKGLSPCEVTR+TLA+EYCK+++ + A  +L+RLD +LW+RT+ TLIRKLCSE+KV M
Sbjct: 608 MVDKGLSPCEVTRLTLAYEYCKQDDSATAMVILERLDKKLWIRTVNTLIRKLCSERKVGM 667

Query: 171 AATFFDKLLNKEKNMDRITLAAFMSASYNTNNYALVADISTRISE 37
           A  FF KLL+K++N+DR+TL AF +A Y +N YALV+D+S RIS+
Sbjct: 668 AVLFFHKLLDKDQNVDRVTLTAFTTACYESNKYALVSDLSERISK 712


>ref|XP_002528370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532238|gb|EEF34042.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 712

 Score =  145 bits (366), Expect = 3e-33
 Identities = 67/106 (63%), Positives = 89/106 (83%)
 Frame = -3

Query: 354 TMLDKGLSPCEVTRITLAHEYCKKNEPSIAFALLDRLDNRLWVRTIKTLIRKLCSEKKVE 175
           TM+D GLSPCEVTR+TLA+EYCK+ + + A  +L+RL+ +LW+RT+ TLIRKLCSEKKV 
Sbjct: 604 TMIDNGLSPCEVTRVTLAYEYCKQGDSATAMIILERLEKKLWIRTVNTLIRKLCSEKKVG 663

Query: 174 MAATFFDKLLNKEKNMDRITLAAFMSASYNTNNYALVADISTRISE 37
           +AA FF KLL+K+ N+DRITLAAF +A Y +N +ALV+D+S RIS+
Sbjct: 664 VAALFFHKLLDKDLNVDRITLAAFTTACYESNKFALVSDLSERISK 709


>ref|XP_004157755.1| PREDICTED: uncharacterized protein LOC101223774 [Cucumis sativus]
          Length = 1315

 Score =  140 bits (354), Expect = 8e-32
 Identities = 66/106 (62%), Positives = 86/106 (81%)
 Frame = -3

Query: 354  TMLDKGLSPCEVTRITLAHEYCKKNEPSIAFALLDRLDNRLWVRTIKTLIRKLCSEKKVE 175
            TM+DKGLSPCEVTR+TL +EYCK  + + A  +L+RL+ +LW+RT+ TLIRKLC EKKV 
Sbjct: 1207 TMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVILERLNKKLWIRTVHTLIRKLCCEKKVA 1266

Query: 174  MAATFFDKLLNKEKNMDRITLAAFMSASYNTNNYALVADISTRISE 37
            +AA FF KLL+KE N+DR+TLAAF +A   +N YALV+D+S RIS+
Sbjct: 1267 LAALFFHKLLDKEVNVDRVTLAAFNTACIESNKYALVSDLSERISK 1312


>ref|XP_004145475.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Cucumis sativus]
          Length = 728

 Score =  140 bits (354), Expect = 8e-32
 Identities = 66/106 (62%), Positives = 86/106 (81%)
 Frame = -3

Query: 354 TMLDKGLSPCEVTRITLAHEYCKKNEPSIAFALLDRLDNRLWVRTIKTLIRKLCSEKKVE 175
           TM+DKGLSPCEVTR+TL +EYCK  + + A  +L+RL+ +LW+RT+ TLIRKLC EKKV 
Sbjct: 620 TMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVILERLNKKLWIRTVHTLIRKLCCEKKVA 679

Query: 174 MAATFFDKLLNKEKNMDRITLAAFMSASYNTNNYALVADISTRISE 37
           +AA FF KLL+KE N+DR+TLAAF +A   +N YALV+D+S RIS+
Sbjct: 680 LAALFFHKLLDKEVNVDRVTLAAFNTACIESNKYALVSDLSERISK 725


>ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Vitis vinifera]
          Length = 708

 Score =  140 bits (354), Expect = 8e-32
 Identities = 64/105 (60%), Positives = 85/105 (80%)
 Frame = -3

Query: 351 MLDKGLSPCEVTRITLAHEYCKKNEPSIAFALLDRLDNRLWVRTIKTLIRKLCSEKKVEM 172
           M+DKGLSPCEVTR+TLA+EYCKK++ S A  +LDRL+ R W+RT+ TL+RKLCSE K++M
Sbjct: 601 MMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQWIRTVNTLVRKLCSEGKLDM 660

Query: 171 AATFFDKLLNKEKNMDRITLAAFMSASYNTNNYALVADISTRISE 37
           AA FF KLL+KE N++R+TL  FM+  Y +N Y LV+++S RI E
Sbjct: 661 AALFFHKLLDKEPNVNRVTLLGFMNKCYESNKYGLVSELSERICE 705


Top