BLASTX nr result

ID: Lithospermum22_contig00034175 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00034175
         (573 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315453.1| predicted protein [Populus trichocarpa] gi|2...    72   5e-11
ref|XP_002270953.1| PREDICTED: RING-H2 finger protein ATL38 [Vit...    70   2e-10
ref|XP_002311039.1| predicted protein [Populus trichocarpa] gi|2...    70   3e-10
ref|XP_004140896.1| PREDICTED: RING-H2 finger protein ATL7-like ...    69   5e-10
ref|XP_002537636.1| conserved hypothetical protein [Ricinus comm...    69   5e-10

>ref|XP_002315453.1| predicted protein [Populus trichocarpa] gi|222864493|gb|EEF01624.1|
           predicted protein [Populus trichocarpa]
          Length = 227

 Score = 72.4 bits (176), Expect = 5e-11
 Identities = 40/51 (78%), Positives = 41/51 (80%), Gaps = 3/51 (5%)
 Frame = -2

Query: 398 MMSSSINLVMRAIGFGVSTMFIVFVCTRLICARIQLNA---SFSQAIRSDL 255
           MM+S INLVM  IGF VSTMFIVFVCTRLICARIQLNA   SF  A RSDL
Sbjct: 1   MMASGINLVMTVIGFSVSTMFIVFVCTRLICARIQLNASRRSFRIASRSDL 51


>ref|XP_002270953.1| PREDICTED: RING-H2 finger protein ATL38 [Vitis vinifera]
          Length = 228

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 37/51 (72%), Positives = 40/51 (78%), Gaps = 3/51 (5%)
 Frame = -2

Query: 398 MMSSSINLVMRAIGFGVSTMFIVFVCTRLICARIQLNA---SFSQAIRSDL 255
           M+S  +NLVM  IGF VSTMFIVFVCTRL+CARIQLNA   SF  A RSDL
Sbjct: 1   MISGGVNLVMTVIGFAVSTMFIVFVCTRLVCARIQLNASRRSFPVASRSDL 51


>ref|XP_002311039.1| predicted protein [Populus trichocarpa] gi|222850859|gb|EEE88406.1|
           predicted protein [Populus trichocarpa]
          Length = 226

 Score = 69.7 bits (169), Expect = 3e-10
 Identities = 37/51 (72%), Positives = 42/51 (82%), Gaps = 3/51 (5%)
 Frame = -2

Query: 398 MMSSSINLVMRAIGFGVSTMFIVFVCTRLICARIQLNAS---FSQAIRSDL 255
           M++S INLVM  IGFGVSTMFIVFVCTRL+CARIQ+NAS   F  A RS+L
Sbjct: 1   MIASGINLVMTVIGFGVSTMFIVFVCTRLLCARIQMNASRRAFPIASRSNL 51


>ref|XP_004140896.1| PREDICTED: RING-H2 finger protein ATL7-like [Cucumis sativus]
           gi|449528792|ref|XP_004171387.1| PREDICTED: RING-H2
           finger protein ATL7-like [Cucumis sativus]
          Length = 218

 Score = 68.9 bits (167), Expect = 5e-10
 Identities = 37/51 (72%), Positives = 40/51 (78%), Gaps = 3/51 (5%)
 Frame = -2

Query: 398 MMSSSINLVMRAIGFGVSTMFIVFVCTRLICARIQLNA---SFSQAIRSDL 255
           MMSS +NLVM  IGF VST+FIVFVCTRL+CARI LNA   SF  A RSDL
Sbjct: 1   MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDL 51


>ref|XP_002537636.1| conserved hypothetical protein [Ricinus communis]
           gi|223515659|gb|EEF24747.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 53

 Score = 68.9 bits (167), Expect = 5e-10
 Identities = 37/51 (72%), Positives = 40/51 (78%), Gaps = 3/51 (5%)
 Frame = -2

Query: 398 MMSSSINLVMRAIGFGVSTMFIVFVCTRLICARIQLNA---SFSQAIRSDL 255
           M+ S INLVM  IGF VSTMFIVFVCTRL+CARIQLN+   SF  A RSDL
Sbjct: 1   MIGSGINLVMTVIGFAVSTMFIVFVCTRLVCARIQLNSSRRSFPIASRSDL 51


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