BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00034142
         (825 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551782.1| PREDICTED: DNA-directed RNA polymerase 2B, c...   467   e-129
emb|CBI27412.3| unnamed protein product [Vitis vinifera]              459   e-127
ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mi...   459   e-127
ref|XP_003530460.1| PREDICTED: DNA-directed RNA polymerase 2B, c...   458   e-127
sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymeras...   453   e-125

>ref|XP_003551782.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial-like [Glycine max]
          Length = 992

 Score =  467 bits (1201), Expect = e-129
 Identities = 218/277 (78%), Positives = 248/277 (89%), Gaps = 3/277 (1%)
 Frame = +2

Query: 2    LIELLLQTAYIQR-ADEIRDGSPDIRPAFVHTFKTAVSKF--ASRRYGVIHCDPQILKGL 172
            LIELLLQTAYIQ  +D++ D +PDIRPAFVH+FKT   +   ASRRYG+I CDP ILKGL
Sbjct: 350  LIELLLQTAYIQPPSDQLPDAAPDIRPAFVHSFKTVTKESIKASRRYGIIQCDPLILKGL 409

Query: 173  EKTARHMVILYMPMLIPPVKWTGYDKGAHIVLPSYIMRTHGARQQRDVVRRTPRKQLEMV 352
            E+TA++MVI YMPML+PPV WTGYDKG H+ LPSY+MRTHG RQQR+ V+R PRKQLE V
Sbjct: 410  ERTAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVRQQREAVKRAPRKQLEPV 469

Query: 353  FEALDTIGSTKWRVNKRVLNIIDRIWASGGRLADLVDREDIPLPEEPDTDDEKQLKKWRW 532
            FEALDT+G TKWRVNK+VL+++DRIWASGGR+ADLVDR+D+PLP+EPDTDDE ++KKW+W
Sbjct: 470  FEALDTLGHTKWRVNKKVLSVVDRIWASGGRIADLVDRDDVPLPDEPDTDDEAKIKKWKW 529

Query: 533  KVNSVKKENSERYSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLGSD 712
            K  S++KEN ERYSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLGSD
Sbjct: 530  KYKSLQKENRERYSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLGSD 589

Query: 713  VCRGILEFAEGHRLGTSGLRWLKIHLANLYANGVDKL 823
            +CRGILEFAEG  LG SGLRWLKIHLANLYA GVDKL
Sbjct: 590  LCRGILEFAEGRSLGKSGLRWLKIHLANLYAGGVDKL 626


>emb|CBI27412.3| unnamed protein product [Vitis vinifera]
          Length = 810

 Score =  459 bits (1182), Expect = e-127
 Identities = 214/277 (77%), Positives = 247/277 (89%), Gaps = 3/277 (1%)
 Frame = +2

Query: 2   LIELLLQTAYIQR-ADEIRDGSPDIRPAFVHTFKTAVSKF--ASRRYGVIHCDPQILKGL 172
           LIELL++TAYIQ  AD++ DG PDIRPAFVHT KT + +    +RRYGVI CDP + KGL
Sbjct: 168 LIELLIETAYIQPPADQLGDGPPDIRPAFVHTLKTVIKETQKGTRRYGVIECDPLVRKGL 227

Query: 173 EKTARHMVILYMPMLIPPVKWTGYDKGAHIVLPSYIMRTHGARQQRDVVRRTPRKQLEMV 352
           EKTARHMVI YMPML+PP+ WTGYDKGA++ LPSY+MR HGARQQR+ ++R PRK LE  
Sbjct: 228 EKTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRIHGARQQREAIKRAPRKALEPA 287

Query: 353 FEALDTIGSTKWRVNKRVLNIIDRIWASGGRLADLVDREDIPLPEEPDTDDEKQLKKWRW 532
           FEAL+T+G+TKWR+NKRVL +IDRIWASGGRLADLVDRED+PLPEEPDT+DE +++KW+W
Sbjct: 288 FEALNTLGNTKWRINKRVLGVIDRIWASGGRLADLVDREDVPLPEEPDTEDEAEIRKWKW 347

Query: 533 KVNSVKKENSERYSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLGSD 712
           KV SVKKENSER+SQRCDIELKLAVARKMKDE+GF+YPHNLDFRGRAYPMHP+LNHLGSD
Sbjct: 348 KVRSVKKENSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDFRGRAYPMHPYLNHLGSD 407

Query: 713 VCRGILEFAEGHRLGTSGLRWLKIHLANLYANGVDKL 823
           +CRGILEFAEG  LG SGLRWLKIHLAN+YA GVDKL
Sbjct: 408 LCRGILEFAEGRPLGKSGLRWLKIHLANVYAGGVDKL 444


>ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Vitis
            vinifera]
          Length = 978

 Score =  459 bits (1182), Expect = e-127
 Identities = 214/277 (77%), Positives = 247/277 (89%), Gaps = 3/277 (1%)
 Frame = +2

Query: 2    LIELLLQTAYIQR-ADEIRDGSPDIRPAFVHTFKTAVSKF--ASRRYGVIHCDPQILKGL 172
            LIELL++TAYIQ  AD++ DG PDIRPAFVHT KT + +    +RRYGVI CDP + KGL
Sbjct: 336  LIELLIETAYIQPPADQLGDGPPDIRPAFVHTLKTVIKETQKGTRRYGVIECDPLVRKGL 395

Query: 173  EKTARHMVILYMPMLIPPVKWTGYDKGAHIVLPSYIMRTHGARQQRDVVRRTPRKQLEMV 352
            EKTARHMVI YMPML+PP+ WTGYDKGA++ LPSY+MR HGARQQR+ ++R PRK LE  
Sbjct: 396  EKTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRIHGARQQREAIKRAPRKALEPA 455

Query: 353  FEALDTIGSTKWRVNKRVLNIIDRIWASGGRLADLVDREDIPLPEEPDTDDEKQLKKWRW 532
            FEAL+T+G+TKWR+NKRVL +IDRIWASGGRLADLVDRED+PLPEEPDT+DE +++KW+W
Sbjct: 456  FEALNTLGNTKWRINKRVLGVIDRIWASGGRLADLVDREDVPLPEEPDTEDEAEIRKWKW 515

Query: 533  KVNSVKKENSERYSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLGSD 712
            KV SVKKENSER+SQRCDIELKLAVARKMKDE+GF+YPHNLDFRGRAYPMHP+LNHLGSD
Sbjct: 516  KVRSVKKENSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDFRGRAYPMHPYLNHLGSD 575

Query: 713  VCRGILEFAEGHRLGTSGLRWLKIHLANLYANGVDKL 823
            +CRGILEFAEG  LG SGLRWLKIHLAN+YA GVDKL
Sbjct: 576  LCRGILEFAEGRPLGKSGLRWLKIHLANVYAGGVDKL 612


>ref|XP_003530460.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial-like [Glycine max]
          Length = 1015

 Score =  458 bits (1178), Expect = e-127
 Identities = 213/277 (76%), Positives = 249/277 (89%), Gaps = 3/277 (1%)
 Frame = +2

Query: 2    LIELLLQTAYIQRA-DEIRDGSPDIRPAFVHTFKTA--VSKFASRRYGVIHCDPQILKGL 172
            LIELL+QTAYIQ   D++ D +PDIRPAFVH+F+T   VS  AS+RYG++ CDP ILKGL
Sbjct: 373  LIELLMQTAYIQPPPDQLLDAAPDIRPAFVHSFRTVAKVSAKASKRYGIVQCDPLILKGL 432

Query: 173  EKTARHMVILYMPMLIPPVKWTGYDKGAHIVLPSYIMRTHGARQQRDVVRRTPRKQLEMV 352
            E+TA++MVI YMPML+PPV W+GYDKG H+ LPSY+MRTHGARQQR+ V+R PRKQLE V
Sbjct: 433  ERTAKNMVIPYMPMLVPPVNWSGYDKGGHLFLPSYVMRTHGARQQREAVKRAPRKQLEPV 492

Query: 353  FEALDTIGSTKWRVNKRVLNIIDRIWASGGRLADLVDREDIPLPEEPDTDDEKQLKKWRW 532
            FEALDT+G TKWRVNK+VL+++DRIWASGGR+ADLVDR+D+PLP++P TDDE+++KKW+W
Sbjct: 493  FEALDTLGHTKWRVNKKVLSVVDRIWASGGRIADLVDRDDVPLPDKPVTDDEEKIKKWKW 552

Query: 533  KVNSVKKENSERYSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLGSD 712
            K  S++KEN ERYSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLGSD
Sbjct: 553  KCKSLQKENRERYSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLGSD 612

Query: 713  VCRGILEFAEGHRLGTSGLRWLKIHLANLYANGVDKL 823
            +CRGILEFAEG  LG SGL+WLKIHLANLYA GVDKL
Sbjct: 613  LCRGILEFAEGRFLGKSGLQWLKIHLANLYAGGVDKL 649


>sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymerase 1B, mitochondrial; AltName:
            Full=NictaRpoT1-tom; AltName: Full=T7 bacteriophage-type
            single subunit RNA polymerase 1B; Flags: Precursor
          Length = 1002

 Score =  453 bits (1165), Expect = e-125
 Identities = 209/275 (76%), Positives = 242/275 (88%), Gaps = 1/275 (0%)
 Frame = +2

Query: 2    LIELLLQTAYIQRA-DEIRDGSPDIRPAFVHTFKTAVSKFASRRYGVIHCDPQILKGLEK 178
            LI++L++TAYIQ   D++ DG PDIRPAFVHT KT  +   SRRYGVI CDP + KGL+K
Sbjct: 362  LIQILMETAYIQPPNDQLDDGPPDIRPAFVHTLKTVETMKGSRRYGVIQCDPLVRKGLDK 421

Query: 179  TARHMVILYMPMLIPPVKWTGYDKGAHIVLPSYIMRTHGARQQRDVVRRTPRKQLEMVFE 358
            TARHMVI YMPML+PP  W GYDKG ++ LPSYIMRTHGA+QQR+ V+R P+KQLE VF+
Sbjct: 422  TARHMVIPYMPMLVPPQSWLGYDKGGYLFLPSYIMRTHGAKQQREAVKRVPKKQLEPVFQ 481

Query: 359  ALDTIGSTKWRVNKRVLNIIDRIWASGGRLADLVDREDIPLPEEPDTDDEKQLKKWRWKV 538
            ALDT+G+TKWRVN++VL I+DRIWASGGRLADLVDRED+PLPE PDT+DE +++KW+WKV
Sbjct: 482  ALDTLGNTKWRVNRKVLGIVDRIWASGGRLADLVDREDVPLPEAPDTEDEAEIRKWKWKV 541

Query: 539  NSVKKENSERYSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLGSDVC 718
              VKKEN ER+SQRCDIELKLAVARKMKDE+GFYYPHNLDFRGRAYPMHP+LNHLGSD+C
Sbjct: 542  KGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLC 601

Query: 719  RGILEFAEGHRLGTSGLRWLKIHLANLYANGVDKL 823
            RGILEFAEG  LGTSGLRWLKIHLAN+Y  GVDKL
Sbjct: 602  RGILEFAEGRPLGTSGLRWLKIHLANVYGGGVDKL 636