BLASTX nr result

ID: Lithospermum22_contig00034071 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00034071
         (237 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADD30034.1| ribosomal protein S16 [Nerium oleander]                129   2e-28
ref|YP_398311.1| ribosomal protein S16 [Lactuca sativa] gi|12223...   128   6e-28
gb|ADZ52302.1| ribosomal protein S16 [Asclepias syriaca] gi|3553...   128   6e-28
ref|YP_004376403.1| ribosomal protein S16 [Olea europaea subsp. ...   128   6e-28
gb|ADD30029.1| ribosomal protein S16 [Ehretia acuminata]              127   7e-28

>gb|ADD30034.1| ribosomal protein S16 [Nerium oleander]
          Length = 88

 Score =  129 bits (325), Expect = 2e-28
 Identities = 63/73 (86%), Positives = 69/73 (94%)
 Frame = -3

Query: 232 VYRIIAIDVRSRREGKDLQKVGFYDPIKNETNLNVPAILYFLERGAQPTGTVRDILKKNG 53
           VYRI+AIDVRSRREGKDLQKVGFYDPIKN+T LNVPAILYFLE+GAQPTGTV+DILKK G
Sbjct: 16  VYRIVAIDVRSRREGKDLQKVGFYDPIKNQTYLNVPAILYFLEKGAQPTGTVQDILKKVG 75

Query: 52  LFKELLPNQTEFN 14
           +FKEL  NQT+FN
Sbjct: 76  VFKELHTNQTKFN 88


>ref|YP_398311.1| ribosomal protein S16 [Lactuca sativa]
           gi|122239160|sp|Q332Z6.1|RR16_LACSA RecName: Full=30S
           ribosomal protein S16, chloroplastic
           gi|78675150|dbj|BAE47576.1| ribosomal protein S16
           [Lactuca sativa]
          Length = 88

 Score =  128 bits (321), Expect = 6e-28
 Identities = 61/73 (83%), Positives = 69/73 (94%)
 Frame = -3

Query: 232 VYRIIAIDVRSRREGKDLQKVGFYDPIKNETNLNVPAILYFLERGAQPTGTVRDILKKNG 53
           VYRI+AIDVRSRREG+DL+KVGFYDPIKN+T LNVPAILYFLE+GAQPTGTV+DILKK  
Sbjct: 16  VYRIVAIDVRSRREGRDLRKVGFYDPIKNQTYLNVPAILYFLEKGAQPTGTVQDILKKAE 75

Query: 52  LFKELLPNQTEFN 14
           +FKEL PNQT+FN
Sbjct: 76  VFKELCPNQTKFN 88


>gb|ADZ52302.1| ribosomal protein S16 [Asclepias syriaca]
           gi|355331706|gb|AER52395.1| ribosomal protein S16
           [Asclepias albicans] gi|355331789|gb|AER52477.1|
           ribosomal protein S16 [Asclepias albicans]
           gi|355332203|gb|AER52886.1| ribosomal protein S16
           [Asclepias macrotis] gi|355332284|gb|AER52966.1|
           ribosomal protein S16 [Asclepias macrotis]
           gi|355332363|gb|AER53044.1| ribosomal protein S16
           [Asclepias masonii] gi|355332446|gb|AER53126.1|
           ribosomal protein S16 [Asclepias subaphylla]
           gi|355332529|gb|AER53208.1| ribosomal protein S16
           [Asclepias subaphylla] gi|355332608|gb|AER53286.1|
           ribosomal protein S16 [Asclepias subulata]
           gi|355332691|gb|AER53368.1| ribosomal protein S16
           [Asclepias subulata] gi|355332774|gb|AER53450.1|
           ribosomal protein S16 [Asclepias albicans x Asclepias
           subulata]
          Length = 88

 Score =  128 bits (321), Expect = 6e-28
 Identities = 61/73 (83%), Positives = 68/73 (93%)
 Frame = -3

Query: 232 VYRIIAIDVRSRREGKDLQKVGFYDPIKNETNLNVPAILYFLERGAQPTGTVRDILKKNG 53
           VYRI+AIDVRSRREGKDLQKVGFYDPIKN+T LNVPAILYFLE+GAQPTGTV+DI K+ G
Sbjct: 16  VYRIVAIDVRSRREGKDLQKVGFYDPIKNQTYLNVPAILYFLEKGAQPTGTVQDIFKRVG 75

Query: 52  LFKELLPNQTEFN 14
           +FKEL PNQ EF+
Sbjct: 76  VFKELYPNQREFH 88


>ref|YP_004376403.1| ribosomal protein S16 [Olea europaea subsp. europaea]
           gi|334700264|ref|YP_004563763.1| ribosomal protein S16
           [Olea europaea subsp. cuspidata]
           gi|334701601|ref|YP_004563986.1| ribosomal protein S16
           [Olea woodiana subsp. woodiana]
           gi|334701870|ref|YP_004564479.1| ribosomal protein S16
           [Olea europaea subsp. maroccana]
           gi|365823314|ref|YP_003359341.2| ribosomal protein S16
           (chloroplast) [Olea europaea]
           gi|291059235|gb|ADD72071.1| ribosomal protein S16 [Olea
           europaea] gi|328795415|emb|CBR30294.1| ribosomal protein
           S16 [Olea europaea subsp. europaea]
           gi|334084383|emb|CBR23809.1| ribosomal protein S16 [Olea
           europaea subsp. cuspidata] gi|334084469|emb|CBR24602.1|
           ribosomal protein S16 [Olea europaea subsp. europaea]
           gi|334084555|emb|CBR30387.1| ribosomal protein S16 [Olea
           europaea subsp. europaea] gi|334084641|emb|CBS29331.1|
           ribosomal protein S16 [Olea woodiana subsp. woodiana]
           gi|334084846|emb|CBS29216.1| ribosomal protein S16 [Olea
           europaea subsp. maroccana] gi|334084932|emb|CBJ04280.1|
           ribosomal protein S16 [Olea europaea subsp. cuspidata]
           gi|334085018|emb|CBR23718.1| ribosomal protein S16 [Olea
           europaea subsp. cuspidata] gi|363413079|gb|ADA69908.2|
           ribosomal protein S16 (chloroplast) [Olea europaea]
          Length = 88

 Score =  128 bits (321), Expect = 6e-28
 Identities = 61/73 (83%), Positives = 69/73 (94%)
 Frame = -3

Query: 232 VYRIIAIDVRSRREGKDLQKVGFYDPIKNETNLNVPAILYFLERGAQPTGTVRDILKKNG 53
           VYRI+AIDVRSRREGKDL+KVGFYDP+KN+T LNVPAILYFLE+GAQPTGTV+DILKK  
Sbjct: 16  VYRIVAIDVRSRREGKDLRKVGFYDPLKNQTYLNVPAILYFLEKGAQPTGTVQDILKKAE 75

Query: 52  LFKELLPNQTEFN 14
           +FKEL PNQT+FN
Sbjct: 76  VFKELRPNQTKFN 88


>gb|ADD30029.1| ribosomal protein S16 [Ehretia acuminata]
          Length = 88

 Score =  127 bits (320), Expect = 7e-28
 Identities = 62/73 (84%), Positives = 67/73 (91%)
 Frame = -3

Query: 232 VYRIIAIDVRSRREGKDLQKVGFYDPIKNETNLNVPAILYFLERGAQPTGTVRDILKKNG 53
           VYRI+AIDVRSRREGKDL+KVGFYDPIKN+T LNVPAILYFLE+GAQPTGTV+DILKK  
Sbjct: 16  VYRIVAIDVRSRREGKDLRKVGFYDPIKNQTYLNVPAILYFLEKGAQPTGTVQDILKKAE 75

Query: 52  LFKELLPNQTEFN 14
            FKE  PNQTEFN
Sbjct: 76  FFKERRPNQTEFN 88


Top