BLASTX nr result

ID: Lithospermum22_contig00034067 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00034067
         (760 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001077727.1| embryo defective 1303 protein [Arabidopsis t...    59   9e-07
ref|NP_564712.1| embryo defective 1303 protein [Arabidopsis thal...    59   1e-06
ref|XP_002891880.1| hypothetical protein ARALYDRAFT_474690 [Arab...    56   1e-05

>ref|NP_001077727.1| embryo defective 1303 protein [Arabidopsis thaliana]
           gi|332195238|gb|AEE33359.1| embryo defective 1303
           protein [Arabidopsis thaliana]
          Length = 151

 Score = 59.3 bits (142), Expect = 9e-07
 Identities = 41/104 (39%), Positives = 54/104 (51%)
 Frame = -1

Query: 595 MEVTASRIASTFITPFVIPRRKFEHQSPSLKSSSEGLNLRTQFRPFNTRGLQNHAIFAKR 416
           M + AS I S+ ++    PR    H S SL     G+  + +  P +  GL +     ++
Sbjct: 1   MAMAASIIQSSPLSFNTKPRI---HSSGSLG----GIKSQNRVSPLSAVGLSSGLGSRRK 53

Query: 415 YSIICXXXXXXXXXAGQTQTVTRESPTITIAPISGKEKSPELDD 284
             +IC          GQTQTVTRESPTIT AP+  KEKSP LDD
Sbjct: 54  SLLICHSAINAKCSEGQTQTVTRESPTITQAPVHSKEKSPSLDD 97


>ref|NP_564712.1| embryo defective 1303 protein [Arabidopsis thaliana]
           gi|12321755|gb|AAG50915.1|AC069159_16 unknown protein
           [Arabidopsis thaliana] gi|17979541|gb|AAL50105.1|
           At1g56200/F14G9_26 [Arabidopsis thaliana]
           gi|20334908|gb|AAM16210.1| At1g56200/F14G9_26
           [Arabidopsis thaliana] gi|21537372|gb|AAM61713.1|
           unknown [Arabidopsis thaliana]
           gi|332195237|gb|AEE33358.1| embryo defective 1303
           protein [Arabidopsis thaliana]
          Length = 154

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 33/79 (41%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
 Frame = -1

Query: 514 PSLKSSSE--GLNLRTQFRPFNTRGLQNHAIFAKRYSIICXXXXXXXXXAGQTQTVTRES 341
           P + SS    G+  + +  P +  GL +     ++  +IC          GQTQTVTRES
Sbjct: 22  PRIHSSGSLGGIKSQNRVSPLSAVGLSSGLGSRRKSLLICHSAINAKCSEGQTQTVTRES 81

Query: 340 PTITIAPISGKEKSPELDD 284
           PTIT AP+  KEKSP LDD
Sbjct: 82  PTITQAPVHSKEKSPSLDD 100


>ref|XP_002891880.1| hypothetical protein ARALYDRAFT_474690 [Arabidopsis lyrata subsp.
           lyrata] gi|297337722|gb|EFH68139.1| hypothetical protein
           ARALYDRAFT_474690 [Arabidopsis lyrata subsp. lyrata]
          Length = 151

 Score = 55.8 bits (133), Expect = 1e-05
 Identities = 35/80 (43%), Positives = 43/80 (53%)
 Frame = -1

Query: 523 HQSPSLKSSSEGLNLRTQFRPFNTRGLQNHAIFAKRYSIICXXXXXXXXXAGQTQTVTRE 344
           H S SL     G+ L+ +  P    GL +     ++  +IC          GQTQTVTRE
Sbjct: 25  HSSGSLG----GIKLQNRVSPL---GLSSGLGSRRQSLLICHSAINAKCSEGQTQTVTRE 77

Query: 343 SPTITIAPISGKEKSPELDD 284
           SPTIT AP+  KEKSP LDD
Sbjct: 78  SPTITQAPVHSKEKSPSLDD 97