BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00034037
         (382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003620181.1| Pentatricopeptide repeat-containing protein ...   117   1e-24
gb|ACU33853.1| PPR1 protein [Capsicum annuum]                         116   2e-24
ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat...   112   2e-23
ref|XP_002514843.1| pentatricopeptide repeat-containing protein,...   112   2e-23
ref|XP_002319049.1| predicted protein [Populus trichocarpa] gi|2...   112   3e-23

>ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355495196|gb|AES76399.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 559

 Score =  117 bits (293), Expect = 1e-24
 Identities = 51/123 (41%), Positives = 89/123 (72%)
 Frame = -3

Query: 374 LLKQMVDNNISPNLHTFNILIDG*CKDGLMKDVEDTVKVMIQQGLQPDVFTYSTLMNAYC 195
           L  +M+  NI+PN++TFNIL+DG CK+  +K+ ++ + +M++QG++PDVFTY++LM+ YC
Sbjct: 269 LFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYC 328

Query: 194 LQGNINTAIKVFDIMKDSGLVPDVITYSVLLKGFFKCGRQDEANHLLKQMVDNNISPNLH 15
           L   +N A  +F+ +   G+ P++ +YS+++ GF K  + DEA +L K+M  NNI P++ 
Sbjct: 329 LVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVV 388

Query: 14  SFN 6
           ++N
Sbjct: 389 TYN 391



 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 41/124 (33%), Positives = 70/124 (56%)
 Frame = -3

Query: 374 LLKQMVDNNISPNLHTFNILIDG*CKDGLMKDVEDTVKVMIQQGLQPDVFTYSTLMNAYC 195
           L  +MV   ISP++ T+N LI G C  G MKD  D    MI + + P+V+T++ L++ +C
Sbjct: 234 LYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFC 293

Query: 194 LQGNINTAIKVFDIMKDSGLVPDVITYSVLLKGFFKCGRQDEANHLLKQMVDNNISPNLH 15
            +  +  A  V  +M   G+ PDV TY+ L+  +      ++A H+   +    ++PN+H
Sbjct: 294 KERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIH 353

Query: 14  SFNI 3
           S++I
Sbjct: 354 SYSI 357



 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 39/123 (31%), Positives = 72/123 (58%)
 Frame = -3

Query: 374 LLKQMVDNNISPNLHTFNILIDG*CKDGLMKDVEDTVKVMIQQGLQPDVFTYSTLMNAYC 195
           LL+++    + PN+  +N +ID  CK  L+ +  D    M+ +G+ PDV TY+ L++ +C
Sbjct: 199 LLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFC 258

Query: 194 LQGNINTAIKVFDIMKDSGLVPDVITYSVLLKGFFKCGRQDEANHLLKQMVDNNISPNLH 15
           + G +  A  +F+ M    + P+V T+++L+ GF K  R  EA ++L  M+   I P++ 
Sbjct: 259 IVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVF 318

Query: 14  SFN 6
           ++N
Sbjct: 319 TYN 321



 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 40/123 (32%), Positives = 70/123 (56%)
 Frame = -3

Query: 377 HLLKQMVDNNISPNLHTFNILIDG*CKDGLMKDVEDTVKVMIQQGLQPDVFTYSTLMNAY 198
           H+   +    ++PN+H+++I+I G CK   + +  +  K M    + PDV TY++L++  
Sbjct: 338 HIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGL 397

Query: 197 CLQGNINTAIKVFDIMKDSGLVPDVITYSVLLKGFFKCGRQDEANHLLKQMVDNNISPNL 18
           C  G I+ A+K+ D M D G+  D ITY+ +L    K  + D+A  LL +M D  I P++
Sbjct: 398 CKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDI 457

Query: 17  HSF 9
            ++
Sbjct: 458 CTY 460



 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 40/112 (35%), Positives = 66/112 (58%)
 Frame = -3

Query: 377 HLLKQMVDNNISPNLHTFNILIDG*CKDGLMKDVEDTVKVMIQQGLQPDVFTYSTLMNAY 198
           +L K+M  NNI P++ T+N LIDG CK G +      V  M  +G+  D  TY+++++A 
Sbjct: 373 NLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDAL 432

Query: 197 CLQGNINTAIKVFDIMKDSGLVPDVITYSVLLKGFFKCGRQDEANHLLKQMV 42
           C    ++ AI +   MKD G+ PD+ TY+ L+ G  K GR ++A  + + ++
Sbjct: 433 CKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLL 484



 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 39/129 (30%), Positives = 70/129 (54%), Gaps = 4/129 (3%)
 Frame = -3

Query: 377 HLLKQMVDNNISPNLH----TFNILIDG*CKDGLMKDVEDTVKVMIQQGLQPDVFTYSTL 210
           H   Q  D  ++   H    ++  LI+G CK G        ++ +  + +QP+V  Y+T+
Sbjct: 159 HQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTI 218

Query: 209 MNAYCLQGNINTAIKVFDIMKDSGLVPDVITYSVLLKGFFKCGRQDEANHLLKQMVDNNI 30
           +++ C    +N A  ++  M   G+ PDV+TY+ L+ GF   G+  +A  L  +M+  NI
Sbjct: 219 IDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENI 278

Query: 29  SPNLHSFNI 3
           +PN+++FNI
Sbjct: 279 NPNVYTFNI 287



 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 31/115 (26%), Positives = 65/115 (56%)
 Frame = -3

Query: 374 LLKQMVDNNISPNLHTFNILIDG*CKDGLMKDVEDTVKVMIQQGLQPDVFTYSTLMNAYC 195
           LL +M D  I P++ T+  L+DG CK+G ++D     + ++ +G   DV  Y+ ++  +C
Sbjct: 444 LLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFC 503

Query: 194 LQGNINTAIKVFDIMKDSGLVPDVITYSVLLKGFFKCGRQDEANHLLKQMVDNNI 30
             G  + ++ +   M+++G +P+ +TY +++   F     D+A  LL++M+   +
Sbjct: 504 SHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITRGL 558



 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 38/124 (30%), Positives = 67/124 (54%)
 Frame = -3

Query: 374 LLKQMVDNNISPNLHTFNILIDG*CKDGLMKDVEDTVKVMIQQGLQPDVFTYSTLMNAYC 195
           L+ +M D  +  +  T+N ++D  CK+  +      +  M  +G+QPD+ TY+TL++  C
Sbjct: 409 LVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLC 468

Query: 194 LQGNINTAIKVFDIMKDSGLVPDVITYSVLLKGFFKCGRQDEANHLLKQMVDNNISPNLH 15
             G +  A  VF+ +   G + DV  Y+ +++GF   G  DE+  LL +M +N   PN  
Sbjct: 469 KNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAV 528

Query: 14  SFNI 3
           ++ I
Sbjct: 529 TYEI 532


>gb|ACU33853.1| PPR1 protein [Capsicum annuum]
          Length = 577

 Score =  116 bits (290), Expect = 2e-24
 Identities = 47/123 (38%), Positives = 89/123 (72%)
 Frame = -3

Query: 374 LLKQMVDNNISPNLHTFNILIDG*CKDGLMKDVEDTVKVMIQQGLQPDVFTYSTLMNAYC 195
           LL +MV+ NI+PN+HTF+ILIDG CK+G ++D ++ ++ MI++G++PD+ TYS +M+ YC
Sbjct: 260 LLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYC 319

Query: 194 LQGNINTAIKVFDIMKDSGLVPDVITYSVLLKGFFKCGRQDEANHLLKQMVDNNISPNLH 15
           L+G ++ A +VF++++D G+ P++ +YS+L+ G+ K     +A  L  ++    + P+  
Sbjct: 320 LRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTV 379

Query: 14  SFN 6
           +++
Sbjct: 380 TYS 382



 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 45/125 (36%), Positives = 73/125 (58%)
 Frame = -3

Query: 377 HLLKQMVDNNISPNLHTFNILIDG*CKDGLMKDVEDTVKVMIQQGLQPDVFTYSTLMNAY 198
           +LL +M   NI PN+ T+N LIDG CK G  + V+  +  M+   + P+V T+S L++  
Sbjct: 224 NLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGL 283

Query: 197 CLQGNINTAIKVFDIMKDSGLVPDVITYSVLLKGFFKCGRQDEANHLLKQMVDNNISPNL 18
           C +G +  A +V   M + G+ PD+ITYS ++ G+   G+ D A  +   + D  I PN+
Sbjct: 284 CKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNI 343

Query: 17  HSFNI 3
            S++I
Sbjct: 344 FSYSI 348



 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 42/125 (33%), Positives = 74/125 (59%), Gaps = 1/125 (0%)
 Frame = -3

Query: 374 LLKQMVDNNI-SPNLHTFNILIDG*CKDGLMKDVEDTVKVMIQQGLQPDVFTYSTLMNAY 198
           L K++V   I  PN   +  +++G  K G  +     +++M Q   +PDV TYS +++A 
Sbjct: 154 LFKKLVREKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDAL 213

Query: 197 CLQGNINTAIKVFDIMKDSGLVPDVITYSVLLKGFFKCGRQDEANHLLKQMVDNNISPNL 18
           C   N++ AI + + MK   + P++ TY+ L+ G  K G+ ++   LL +MV+ NI+PN+
Sbjct: 214 CKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNV 273

Query: 17  HSFNI 3
           H+F+I
Sbjct: 274 HTFSI 278



 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 41/118 (34%), Positives = 63/118 (53%)
 Frame = -3

Query: 356 DNNISPNLHTFNILIDG*CKDGLMKDVEDTVKVMIQQGLQPDVFTYSTLMNAYCLQGNIN 177
           D  I PN+ +++ILI+G CK   +         + Q+GL+PD  TYST+++     G I 
Sbjct: 336 DKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIG 395

Query: 176 TAIKVFDIMKDSGLVPDVITYSVLLKGFFKCGRQDEANHLLKQMVDNNISPNLHSFNI 3
            A K+FD M   G  PD+  +S LL G+FK G  +EA  L  ++  N    N+  + +
Sbjct: 396 DAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTV 453



 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 33/123 (26%), Positives = 72/123 (58%)
 Frame = -3

Query: 374 LLKQMVDNNISPNLHTFNILIDG*CKDGLMKDVEDTVKVMIQQGLQPDVFTYSTLMNAYC 195
           LL+ M   N  P++ T++I+ID  CKD  +    + +  M Q+ + P++FTY++L++  C
Sbjct: 190 LLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLC 249

Query: 194 LQGNINTAIKVFDIMKDSGLVPDVITYSVLLKGFFKCGRQDEANHLLKQMVDNNISPNLH 15
             G       +   M +  + P+V T+S+L+ G  K G+ ++A+ +++ M++  + P++ 
Sbjct: 250 KLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDII 309

Query: 14  SFN 6
           +++
Sbjct: 310 TYS 312



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 30/116 (25%), Positives = 61/116 (52%)
 Frame = -3

Query: 374 LLKQMVDNNISPNLHTFNILIDG*CKDGLMKDVEDTVKVMIQQGLQPDVFTYSTLMNAYC 195
           L  ++  N    N+  + ++I+G CK+  +++     + +   GL PDV TY+ ++  +C
Sbjct: 435 LFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFC 494

Query: 194 LQGNINTAIKVFDIMKDSGLVPDVITYSVLLKGFFKCGRQDEANHLLKQMVDNNIS 27
            +G  +    +   M+D+G   + ITY+V+++GFF+  +  E    +K+M     S
Sbjct: 495 REGLFDEVKGILRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRGFS 550



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 31/124 (25%), Positives = 64/124 (51%)
 Frame = -3

Query: 374 LLKQMVDNNISPNLHTFNILIDG*CKDGLMKDVEDTVKVMIQQGLQPDVFTYSTLMNAYC 195
           +  +M+    +P++   + L+ G  K GL+++       + +     ++  Y+ ++N  C
Sbjct: 400 IFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLC 459

Query: 194 LQGNINTAIKVFDIMKDSGLVPDVITYSVLLKGFFKCGRQDEANHLLKQMVDNNISPNLH 15
               +  A  +F+ +   GL+PDV TY+V++ GF + G  DE   +L++M DN    N  
Sbjct: 460 KNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNI 519

Query: 14  SFNI 3
           ++N+
Sbjct: 520 TYNV 523


>ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 592

 Score =  112 bits (281), Expect = 2e-23
 Identities = 52/123 (42%), Positives = 81/123 (65%)
 Frame = -3

Query: 374 LLKQMVDNNISPNLHTFNILIDG*CKDGLMKDVEDTVKVMIQQGLQPDVFTYSTLMNAYC 195
           L+ +MVD+ I PN+  F  L+D  CK+G++    D V VMIQ+G++PDV TY+ LM+ +C
Sbjct: 271 LMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHC 330

Query: 194 LQGNINTAIKVFDIMKDSGLVPDVITYSVLLKGFFKCGRQDEANHLLKQMVDNNISPNLH 15
           L+  ++ A KVFD M   G  P+VI+YS L+ G+ K  R D+A +L ++M    + PN+ 
Sbjct: 331 LRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIV 390

Query: 14  SFN 6
           ++N
Sbjct: 391 TYN 393



 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 41/124 (33%), Positives = 69/124 (55%)
 Frame = -3

Query: 377 HLLKQMVDNNISPNLHTFNILIDG*CKDGLMKDVEDTVKVMIQQGLQPDVFTYSTLMNAY 198
           ++  +M+   ISPN+ T+N +I G CK    K V   +  M+   + P+V  ++TL++A 
Sbjct: 235 NIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDAL 294

Query: 197 CLQGNINTAIKVFDIMKDSGLVPDVITYSVLLKGFFKCGRQDEANHLLKQMVDNNISPNL 18
           C +G +  A  V D+M   G+ PDV+TY+ L+ G       DEA+ +   MV    +PN+
Sbjct: 295 CKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNV 354

Query: 17  HSFN 6
            S++
Sbjct: 355 ISYS 358



 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 40/124 (32%), Positives = 72/124 (58%)
 Frame = -3

Query: 374 LLKQMVDNNISPNLHTFNILIDG*CKDGLMKDVEDTVKVMIQQGLQPDVFTYSTLMNAYC 195
           +LK +  +N++P++ ++NI+IDG C+ G ++   D    +  +GL PDV+TY+ ++N  C
Sbjct: 446 MLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLC 505

Query: 194 LQGNINTAIKVFDIMKDSGLVPDVITYSVLLKGFFKCGRQDEANHLLKQMVDNNISPNLH 15
           LQG +  A K+F  M   G  PD  TY+++ +GF +      A  LL++M+    S +  
Sbjct: 506 LQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADAS 565

Query: 14  SFNI 3
           +  +
Sbjct: 566 TITL 569



 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 39/123 (31%), Positives = 64/123 (52%)
 Frame = -3

Query: 377 HLLKQMVDNNISPNLHTFNILIDG*CKDGLMKDVEDTVKVMIQQGLQPDVFTYSTLMNAY 198
           HL  +MV     PN  T+  LI G CK G  +     ++ M+Q+  +P+V TY+T+++  
Sbjct: 165 HLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCL 224

Query: 197 CLQGNINTAIKVFDIMKDSGLVPDVITYSVLLKGFFKCGRQDEANHLLKQMVDNNISPNL 18
                +N A+ +F  M   G+ P+V TY+ ++ G  K         L+ +MVD+ I PN+
Sbjct: 225 FKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNV 284

Query: 17  HSF 9
             F
Sbjct: 285 VIF 287



 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 40/123 (32%), Positives = 63/123 (51%)
 Frame = -3

Query: 374 LLKQMVDNNISPNLHTFNILIDG*CKDGLMKDVEDTVKVMIQQGLQPDVFTYSTLMNAYC 195
           L KQM    I  +++T  I+I+  C    +      +  + + G QPD  T++TL+   C
Sbjct: 96  LSKQMDSLGIPSDVYTLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLC 155

Query: 194 LQGNINTAIKVFDIMKDSGLVPDVITYSVLLKGFFKCGRQDEANHLLKQMVDNNISPNLH 15
           ++G I  A+ +FD M   G  P+ +TY  L+ G  K G    A  LL+ MV  N  PN+ 
Sbjct: 156 VEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVI 215

Query: 14  SFN 6
           ++N
Sbjct: 216 TYN 218



 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 37/112 (33%), Positives = 61/112 (54%)
 Frame = -3

Query: 341 PNLHTFNILIDG*CKDGLMKDVEDTVKVMIQQGLQPDVFTYSTLMNAYCLQGNINTAIKV 162
           P+  TF  LI G C +G + +       M+ +G QP+  TY TL++  C  GN   AI++
Sbjct: 142 PDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRL 201

Query: 161 FDIMKDSGLVPDVITYSVLLKGFFKCGRQDEANHLLKQMVDNNISPNLHSFN 6
              M      P+VITY+ ++   FK  + +EA ++  +M+   ISPN+ ++N
Sbjct: 202 LRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYN 253



 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 32/125 (25%), Positives = 65/125 (52%)
 Frame = -3

Query: 377 HLLKQMVDNNISPNLHTFNILIDG*CKDGLMKDVEDTVKVMIQQGLQPDVFTYSTLMNAY 198
           +L ++M    + PN+ T+N LI G C  G ++D       M+  G  PD+ TY  L++  
Sbjct: 375 YLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYL 434

Query: 197 CLQGNINTAIKVFDIMKDSGLVPDVITYSVLLKGFFKCGRQDEANHLLKQMVDNNISPNL 18
           C   +++ A+ +   ++ S L PD+ +Y++++ G  + G  + A  L   +    + P++
Sbjct: 435 CKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDV 494

Query: 17  HSFNI 3
            ++ I
Sbjct: 495 WTYTI 499



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 36/124 (29%), Positives = 64/124 (51%)
 Frame = -3

Query: 374 LLKQMVDNNISPNLHTFNILIDG*CKDGLMKDVEDTVKVMIQQGLQPDVFTYSTLMNAYC 195
           L  +MV +   P+L T+ IL+D  CK   +      +K +    L PD+ +Y+ +++  C
Sbjct: 411 LFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMC 470

Query: 194 LQGNINTAIKVFDIMKDSGLVPDVITYSVLLKGFFKCGRQDEANHLLKQMVDNNISPNLH 15
             G +  A  +F  +   GL PDV TY++++ G    G   EA  L ++M  +  SP+  
Sbjct: 471 RVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDC 530

Query: 14  SFNI 3
           ++N+
Sbjct: 531 TYNL 534


>ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545894|gb|EEF47397.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 594

 Score =  112 bits (281), Expect = 2e-23
 Identities = 50/118 (42%), Positives = 81/118 (68%)
 Frame = -3

Query: 374 LLKQMVDNNISPNLHTFNILIDG*CKDGLMKDVEDTVKVMIQQGLQPDVFTYSTLMNAYC 195
           LL +M+  NI P++ TF+I +D  CK G++ + +  + +MI++GL+P+V TY++LM+ YC
Sbjct: 371 LLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYC 430

Query: 194 LQGNINTAIKVFDIMKDSGLVPDVITYSVLLKGFFKCGRQDEANHLLKQMVDNNISPN 21
           L   ++ A KVFDIM + G  PDV++Y++L+KG+ K  R DEA  L  +M    ++PN
Sbjct: 431 LHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPN 488



 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 39/123 (31%), Positives = 68/123 (55%)
 Frame = -3

Query: 374 LLKQMVDNNISPNLHTFNILIDG*CKDGLMKDVEDTVKVMIQQGLQPDVFTYSTLMNAYC 195
           ++  M++  + PN+ T+N L+DG C    M +      +M+ +G  PDV +Y+ L+  YC
Sbjct: 406 IINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYC 465

Query: 194 LQGNINTAIKVFDIMKDSGLVPDVITYSVLLKGFFKCGRQDEANHLLKQMVDNNISPNLH 15
               I+ A ++FD M   GL P+ IT++ L+ G  + GR   A  L K+M  +   P+L 
Sbjct: 466 KSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLI 525

Query: 14  SFN 6
           +++
Sbjct: 526 TYS 528



 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 45/124 (36%), Positives = 69/124 (55%)
 Frame = -3

Query: 374 LLKQMVDNNISPNLHTFNILIDG*CKDGLMKDVEDTVKVMIQQGLQPDVFTYSTLMNAYC 195
           L   M    ISP + T+N LI G C  G  K      K M++  ++PDV T+S L++A C
Sbjct: 266 LFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALC 325

Query: 194 LQGNINTAIKVFDIMKDSGLVPDVITYSVLLKGFFKCGRQDEANHLLKQMVDNNISPNLH 15
            +G +  A+ VF  M    + PD++TYS L+ G  K     E++ LL +M+  NI P++ 
Sbjct: 326 KEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVV 385

Query: 14  SFNI 3
           +F+I
Sbjct: 386 TFSI 389



 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 38/123 (30%), Positives = 72/123 (58%)
 Frame = -3

Query: 374 LLKQMVDNNISPNLHTFNILIDG*CKDGLMKDVEDTVKVMIQQGLQPDVFTYSTLMNAYC 195
           L K+M++ N+ P++ TF+IL+D  CK+G++ +       MIQ  ++PD+ TYS+L++  C
Sbjct: 301 LFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVC 360

Query: 194 LQGNINTAIKVFDIMKDSGLVPDVITYSVLLKGFFKCGRQDEANHLLKQMVDNNISPNLH 15
                  +  + + M    + PDV+T+S+ +  F K G   EA  ++  M++  + PN+ 
Sbjct: 361 KSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVV 420

Query: 14  SFN 6
           ++N
Sbjct: 421 TYN 423



 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 37/121 (30%), Positives = 73/121 (60%)
 Frame = -3

Query: 365 QMVDNNISPNLHTFNILIDG*CKDGLMKDVEDTVKVMIQQGLQPDVFTYSTLMNAYCLQG 186
           +M+   + P++ T++ LI G CK  L K+    +  M+ + ++PDV T+S  ++ +C +G
Sbjct: 339 KMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKG 398

Query: 185 NINTAIKVFDIMKDSGLVPDVITYSVLLKGFFKCGRQDEANHLLKQMVDNNISPNLHSFN 6
            ++ A  + ++M + GL P+V+TY+ L+ G+    + DEA  +   MV+   +P++ S+N
Sbjct: 399 MVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYN 458

Query: 5   I 3
           I
Sbjct: 459 I 459



 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 41/114 (35%), Positives = 63/114 (55%)
 Frame = -3

Query: 362 MVDNNISPNLHTFNILIDG*CKDGLMKDVEDTVKVMIQQGLQPDVFTYSTLMNAYCLQGN 183
           MV+   +P++ ++NILI G CK   + + +     M  +GL P+  T++TL++  C  G 
Sbjct: 445 MVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGR 504

Query: 182 INTAIKVFDIMKDSGLVPDVITYSVLLKGFFKCGRQDEANHLLKQMVDNNISPN 21
              A ++F  M   G  PD+ITYS LL GF K G  DEA  L + +  + + PN
Sbjct: 505 PYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPN 558



 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 36/119 (30%), Positives = 63/119 (52%)
 Frame = -3

Query: 374 LLKQMVDNNISPNLHTFNILIDG*CKDGLMKDVEDTVKVMIQQGLQPDVFTYSTLMNAYC 195
           L  +M    ++PN  T   LI G C+ G     ++  K M   G  PD+ TYSTL++ +C
Sbjct: 476 LFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFC 535

Query: 194 LQGNINTAIKVFDIMKDSGLVPDVITYSVLLKGFFKCGRQDEANHLLKQMVDNNISPNL 18
             G+++ A+ +F+ +K S L P+ +   +LL G  K G+ ++A  L   +    + P++
Sbjct: 536 KHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLSIEELQPDV 594



 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 34/123 (27%), Positives = 71/123 (57%)
 Frame = -3

Query: 371 LKQMVDNNISPNLHTFNILIDG*CKDGLMKDVEDTVKVMIQQGLQPDVFTYSTLMNAYCL 192
           L  ++     P ++T  ++++G CK G        +K M++   +P+V +YS ++++ C 
Sbjct: 197 LDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCK 256

Query: 191 QGNINTAIKVFDIMKDSGLVPDVITYSVLLKGFFKCGRQDEANHLLKQMVDNNISPNLHS 12
              +N A+ +F  M+  G+ P V+TY+ L+ G    G+  +A+ L K+M++ N+ P++ +
Sbjct: 257 NRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVT 316

Query: 11  FNI 3
           F+I
Sbjct: 317 FSI 319



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 35/122 (28%), Positives = 67/122 (54%)
 Frame = -3

Query: 371 LKQMVDNNISPNLHTFNILIDG*CKDGLMKDVEDTVKVMIQQGLQPDVFTYSTLMNAYCL 192
           +K+MV+ +  P + +++I+ID  CK+ L+ +  D    M   G+ P V TY++L+   C 
Sbjct: 232 MKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCN 291

Query: 191 QGNINTAIKVFDIMKDSGLVPDVITYSVLLKGFFKCGRQDEANHLLKQMVDNNISPNLHS 12
            G    A  +F  M +  + PDV+T+S+L+    K G   EA  +  +M+   + P++ +
Sbjct: 292 SGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVT 351

Query: 11  FN 6
           ++
Sbjct: 352 YS 353



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 33/112 (29%), Positives = 61/112 (54%)
 Frame = -3

Query: 341 PNLHTFNILIDG*CKDGLMKDVEDTVKVMIQQGLQPDVFTYSTLMNAYCLQGNINTAIKV 162
           P++ TFN LI+G C +G + +  + +  ++ +G QP V+T++ ++N  C  G  + AI  
Sbjct: 172 PSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVW 231

Query: 161 FDIMKDSGLVPDVITYSVLLKGFFKCGRQDEANHLLKQMVDNNISPNLHSFN 6
              M +    P+V++YS+++    K    +EA  L   M    ISP + ++N
Sbjct: 232 MKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYN 283


>ref|XP_002319049.1| predicted protein [Populus trichocarpa] gi|222857425|gb|EEE94972.1|
           predicted protein [Populus trichocarpa]
          Length = 585

 Score =  112 bits (280), Expect = 3e-23
 Identities = 50/123 (40%), Positives = 79/123 (64%)
 Frame = -3

Query: 374 LLKQMVDNNISPNLHTFNILIDG*CKDGLMKDVEDTVKVMIQQGLQPDVFTYSTLMNAYC 195
           L KQM+  N+ PN  TF IL+DG CK+G++ +     ++M + G++PD +TYS LM+ YC
Sbjct: 268 LFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYC 327

Query: 194 LQGNINTAIKVFDIMKDSGLVPDVITYSVLLKGFFKCGRQDEANHLLKQMVDNNISPNLH 15
           LQ  ++ A K+FDIM   G  P V  Y++L+ G  K  R +EA  LL +M D +++P+  
Sbjct: 328 LQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTV 387

Query: 14  SFN 6
           +++
Sbjct: 388 TYS 390



 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 50/120 (41%), Positives = 69/120 (57%)
 Frame = -3

Query: 362 MVDNNISPNLHTFNILIDG*CKDGLMKDVEDTVKVMIQQGLQPDVFTYSTLMNAYCLQGN 183
           MV    +P++  +NILI+G CK   + + +  +  M  + L PD  TYSTLM  +C  G 
Sbjct: 342 MVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGR 401

Query: 182 INTAIKVFDIMKDSGLVPDVITYSVLLKGFFKCGRQDEANHLLKQMVDNNISPNLHSFNI 3
              A K+F  M   GL+PD ITYS+LL G  K G  DEA  LLK M ++ I P++  +NI
Sbjct: 402 PQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNI 461



 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 43/114 (37%), Positives = 67/114 (58%)
 Frame = -3

Query: 344 SPNLHTFNILIDG*CKDGLMKDVEDTVKVMIQQGLQPDVFTYSTLMNAYCLQGNINTAIK 165
           +P+L T+  +I G CK G   +    +K M ++G +PDV  Y+T++++ C     N A+ 
Sbjct: 173 APSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMY 232

Query: 164 VFDIMKDSGLVPDVITYSVLLKGFFKCGRQDEANHLLKQMVDNNISPNLHSFNI 3
            F  M D G+ P+V+TYS +L GF   G+ +EA  L KQM+  N+ PN  +F I
Sbjct: 233 FFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTI 286



 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 36/123 (29%), Positives = 70/123 (56%)
 Frame = -3

Query: 374 LLKQMVDNNISPNLHTFNILIDG*CKDGLMKDVEDTVKVMIQQGLQPDVFTYSTLMNAYC 195
           LLK+M +    P++  +N +ID  CKD    +       M+ QG+ P+V TYS++++ +C
Sbjct: 198 LLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFC 257

Query: 194 LQGNINTAIKVFDIMKDSGLVPDVITYSVLLKGFFKCGRQDEANHLLKQMVDNNISPNLH 15
             G +N A  +F  M    ++P+ +T+++L+ G  K G   EA  + + M +N + P+ +
Sbjct: 258 NLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAY 317

Query: 14  SFN 6
           +++
Sbjct: 318 TYS 320



 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 38/124 (30%), Positives = 69/124 (55%)
 Frame = -3

Query: 374 LLKQMVDNNISPNLHTFNILIDG*CKDGLMKDVEDTVKVMIQQGLQPDVFTYSTLMNAYC 195
           L K+M    + P+  T++IL+DG CK G + +    +K M +  ++P +  Y+ L+   C
Sbjct: 408 LFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMC 467

Query: 194 LQGNINTAIKVFDIMKDSGLVPDVITYSVLLKGFFKCGRQDEANHLLKQMVDNNISPNLH 15
             G +  A ++F  +   G+ P V+TY+V++ G  K G  +EA  + ++MV N   PN  
Sbjct: 468 NFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSC 527

Query: 14  SFNI 3
           ++N+
Sbjct: 528 TYNV 531



 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 44/125 (35%), Positives = 67/125 (53%), Gaps = 2/125 (1%)
 Frame = -3

Query: 374 LLKQMVDNNISPNLHTFNILIDG*CKDGL--MKDVEDTVKVMIQQGLQPDVFTYSTLMNA 201
           L KQM  +NI PN++T  ILI+  C      +      +  M + GLQP   T+ TL+N 
Sbjct: 91  LCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNG 150

Query: 200 YCLQGNINTAIKVFDIMKDSGLVPDVITYSVLLKGFFKCGRQDEANHLLKQMVDNNISPN 21
            C +  I  A+K+FD +   G  P +ITY+ ++KG  K G    A  LLK+M +    P+
Sbjct: 151 LCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPD 210

Query: 20  LHSFN 6
           + ++N
Sbjct: 211 VVAYN 215



 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 38/124 (30%), Positives = 69/124 (55%)
 Frame = -3

Query: 374 LLKQMVDNNISPNLHTFNILIDG*CKDGLMKDVEDTVKVMIQQGLQPDVFTYSTLMNAYC 195
           LLK M ++ I P++  +NILI G C  G ++   +    +  +G+QP V TY+ +++   
Sbjct: 443 LLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLL 502

Query: 194 LQGNINTAIKVFDIMKDSGLVPDVITYSVLLKGFFKCGRQDEANHLLKQMVDNNISPNLH 15
            +G  N A ++F  M  +G +P+  TY+V ++GF + G    A  L+++MV    S +  
Sbjct: 503 KEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSS 562

Query: 14  SFNI 3
           +F +
Sbjct: 563 TFQM 566