BLASTX nr result

ID: Lithospermum22_contig00033990 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00033990
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302811.1| predicted protein [Populus trichocarpa] gi|2...   105   5e-21
gb|AFK38291.1| unknown [Lotus japonicus]                               97   1e-18
ref|XP_003626081.1| Charged multivesicular body protein [Medicag...    97   1e-18
ref|XP_004168127.1| PREDICTED: LOW QUALITY PROTEIN: charged mult...    97   1e-18
ref|XP_004151427.1| PREDICTED: charged multivesicular body prote...    97   1e-18

>ref|XP_002302811.1| predicted protein [Populus trichocarpa] gi|222844537|gb|EEE82084.1|
           predicted protein [Populus trichocarpa]
          Length = 436

 Score =  105 bits (261), Expect = 5e-21
 Identities = 45/88 (51%), Positives = 64/88 (72%)
 Frame = -3

Query: 264 VASYIHQEVEDWDDEQKSRSRFKAMSGQTQDYEWQTRYIFWKNLIINVAKHLNVFIIHPN 85
           V  +I ++V DWDDE  + +RFKA SGQ  D  W+ +Y+FWK+LI+ +A+HL++FII P+
Sbjct: 7   VKEFIRKQVPDWDDEIMATARFKAFSGQRSD--WEPKYLFWKDLILKIARHLDLFIIQPS 64

Query: 84  QLQHVWFRRGHLSPLCIDQVLVEMYKNG 1
           Q++  WF RG L+PLC+D VL  MY  G
Sbjct: 65  QVKEKWFNRGGLTPLCLDHVLCLMYNEG 92


>gb|AFK38291.1| unknown [Lotus japonicus]
          Length = 200

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 43/88 (48%), Positives = 59/88 (67%)
 Frame = -3

Query: 264 VASYIHQEVEDWDDEQKSRSRFKAMSGQTQDYEWQTRYIFWKNLIINVAKHLNVFIIHPN 85
           V  +I +EV DWDDE  + +RFKA SGQ  D  WQ  ++FW+NLII +A H     + P+
Sbjct: 7   VKDFIAKEVADWDDELVTVARFKAFSGQRSD--WQPNFLFWRNLIIKIATHFRFLTVQPS 64

Query: 84  QLQHVWFRRGHLSPLCIDQVLVEMYKNG 1
           Q+++ WF RG L+PLC+D+VL  MY  G
Sbjct: 65  QVKNEWFNRGGLTPLCLDRVLFLMYNEG 92


>ref|XP_003626081.1| Charged multivesicular body protein [Medicago truncatula]
           gi|355501096|gb|AES82299.1| Charged multivesicular body
           protein [Medicago truncatula]
          Length = 429

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 45/90 (50%), Positives = 60/90 (66%)
 Frame = -3

Query: 270 IKVASYIHQEVEDWDDEQKSRSRFKAMSGQTQDYEWQTRYIFWKNLIINVAKHLNVFIIH 91
           + V  +I +EV DW+DE  + +RFKA SGQ  D  WQ  +IFW+NLII +A H    +I 
Sbjct: 3   LNVKDFIAKEVPDWNDEVIAVARFKAFSGQRSD--WQPNFIFWRNLIIKIATHFGFLLIK 60

Query: 90  PNQLQHVWFRRGHLSPLCIDQVLVEMYKNG 1
           P+Q+++ WF RG L+PLCID VL  MY  G
Sbjct: 61  PSQVKNDWFNRGGLTPLCIDDVLSLMYNEG 90


>ref|XP_004168127.1| PREDICTED: LOW QUALITY PROTEIN: charged multivesicular body protein
           7-like [Cucumis sativus]
          Length = 440

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 43/88 (48%), Positives = 61/88 (69%)
 Frame = -3

Query: 264 VASYIHQEVEDWDDEQKSRSRFKAMSGQTQDYEWQTRYIFWKNLIINVAKHLNVFIIHPN 85
           V  +I ++V DWDDE  + +RFKA SGQ  D  W+ RY+FW++LI+ VA+  N  II P+
Sbjct: 10  VREFIREKVPDWDDEVVATARFKAFSGQKSD--WEPRYLFWRDLILTVARQFNFLIIKPS 67

Query: 84  QLQHVWFRRGHLSPLCIDQVLVEMYKNG 1
           ++++ WF RG L+PLC+D VL  MY  G
Sbjct: 68  EIKNQWFYRGGLTPLCLDHVLHLMYTGG 95


>ref|XP_004151427.1| PREDICTED: charged multivesicular body protein 7-like [Cucumis
           sativus]
          Length = 440

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 43/88 (48%), Positives = 61/88 (69%)
 Frame = -3

Query: 264 VASYIHQEVEDWDDEQKSRSRFKAMSGQTQDYEWQTRYIFWKNLIINVAKHLNVFIIHPN 85
           V  +I ++V DWDDE  + +RFKA SGQ  D  W+ RY+FW++LI+ VA+  N  II P+
Sbjct: 10  VREFIREKVPDWDDEVVATARFKAFSGQKSD--WEPRYLFWRDLILTVARQFNFLIIKPS 67

Query: 84  QLQHVWFRRGHLSPLCIDQVLVEMYKNG 1
           ++++ WF RG L+PLC+D VL  MY  G
Sbjct: 68  EIKNQWFYRGGLTPLCLDHVLHLMYTGG 95


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