BLASTX nr result

ID: Lithospermum22_contig00033957 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00033957
         (318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328167.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06
ref|XP_002529065.1| DNA polymerase epsilon, catalytic subunit, p...    55   5e-06

>ref|XP_002328167.1| predicted protein [Populus trichocarpa] gi|222837682|gb|EEE76047.1|
            predicted protein [Populus trichocarpa]
          Length = 2221

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 34/83 (40%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
 Frame = -1

Query: 303  DDLIVGDLEDFHSHGKKVG-VRPIVRCYGANNDRNSSKATSQVDTISKKICHNANEVLLS 127
            D+  V DLEDF      +   RPIVRCY  N  R S+K T Q+++  ++   + +E  LS
Sbjct: 1178 DEANVKDLEDFQIKSSSINRPRPIVRCYDVNEKR-SAKKTGQLNSAEQQT-DSVHE--LS 1233

Query: 126  ESPGHAINIEENIEMNTDYKGWL 58
              P H  +  ENI+ N DY+GWL
Sbjct: 1234 SQPQHNTSYAENIDRNVDYQGWL 1256


>ref|XP_002529065.1| DNA polymerase epsilon, catalytic subunit, putative [Ricinus
            communis] gi|223531477|gb|EEF33309.1| DNA polymerase
            epsilon, catalytic subunit, putative [Ricinus communis]
          Length = 2227

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
 Frame = -1

Query: 315  NSASDDLIVGDLEDFHSHGKKV-GVRPIVRCYGANNDRNSSKATSQVDTISKKICHNANE 139
            N   D+  V DLEDF +      G RPIV CY  N++ +S KAT ++D+  ++  +  + 
Sbjct: 1177 NCMMDEENVEDLEDFRNKSISTNGPRPIVHCYATNSEEHSVKATGRMDSSHQQTDNGESV 1236

Query: 138  VLLSESPGHAINIEENIEMNTDYKGWL 58
              LS       +  E+I+ N DY+GWL
Sbjct: 1237 HELSSLVQQTASSGESIDRNVDYQGWL 1263


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