BLASTX nr result

ID: Lithospermum22_contig00033941 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00033941
         (502 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN82073.1| hypothetical protein VITISV_036538 [Vitis vinifera]    72   5e-11
gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsi...    66   3e-09
emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]    64   1e-08
gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha...    62   4e-08
ref|XP_003549005.1| PREDICTED: uncharacterized protein LOC100789...    59   3e-07

>emb|CAN82073.1| hypothetical protein VITISV_036538 [Vitis vinifera]
          Length = 1157

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 51/178 (28%), Positives = 76/178 (42%), Gaps = 13/178 (7%)
 Frame = +2

Query: 2   GALRSSLLSQDPPFTLDRAYHAMLQEEQLQSKWGFSIDRDEVMAMAAQAPSHGKVDLRTK 181
           G +RS++LS +P   L+R Y  ++Q+E++++      +R   M+ A Q            
Sbjct: 154 GTVRSNILSIEPLSNLNRVYAMIVQQERVRTMTRTKEERGSPMSFAVQVGGRNPGGDGKD 213

Query: 182 GNNFCTFCHRSGHGISTCFAKNGYPEWWXXXXXXXXXXXXLKASGPHRPGAQRGP-AQPG 358
               C+ C R GH + +CF +  YPEWW               SG H  G Q+G     G
Sbjct: 214 KTVICSNCKRKGHEVDSCFQRIAYPEWWGDRPRTTTSG----CSGGHGRGVQQGTGGGRG 269

Query: 359 RALEAYSPSLSTSSYNAGGS------------LSDVEWQKLKIMLRASDVGAEDRLTG 496
           R   A +  + T   + G S            LSD +W  L  ML +   GA +RL G
Sbjct: 270 RGGTARANVVQTLGTDGGRSVVTDSNRTGISGLSDKQWTTLLTMLNSHKGGANERLIG 327


>gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1333

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 50/174 (28%), Positives = 78/174 (44%), Gaps = 12/174 (6%)
 Frame = +2

Query: 8   LRSSLLSQDPPFTLDRAYHAMLQEEQLQSKWGFSID-RDEVMAMAAQAPS---HGKVDLR 175
           +RSSL+S+ P   L+  Y+ + QEE L       +D + EV A AAQ       G+ D +
Sbjct: 112 VRSSLVSRIPVQPLEEVYNIVRQEEDLLRNGANVLDDQREVNAFAAQMRPKLYQGRGDEK 171

Query: 176 TKGNNFCTFCHRSGHGISTCFAKNGYPEWWXXXXXXXXXXXXLKASGPHRPGAQRGPAQP 355
            K +  C  C+RSGH   +C+A  GYPEWW             +       G  RG A  
Sbjct: 172 DK-SMVCKHCNRSGHASESCYAVIGYPEWWGDRPRSRSLQTRGRGGTNSSGGRGRGAAAY 230

Query: 356 GRAL--------EAYSPSLSTSSYNAGGSLSDVEWQKLKIMLRASDVGAEDRLT 493
              +        E  + +L+    +    L+D +W+ +K +L +    A ++LT
Sbjct: 231 ANRVTVPNHDTYEQANYALTDEDRDGVNGLTDSQWRTIKSILNSGKDAATEKLT 284


>emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]
          Length = 1316

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 52/171 (30%), Positives = 74/171 (43%), Gaps = 6/171 (3%)
 Frame = +2

Query: 2   GALRSSLLSQDPPFTLDRAYHAMLQEEQLQSKWGFSIDRDEVMAMAAQAPSHGKVDLRTK 181
           G +RSS+L+ DP  TL + Y  + QEE+ +S      DR E+   AA     G    +T 
Sbjct: 87  GTVRSSILALDPLPTLGKIYAMVTQEERHRSM-ARGADRAEITVFAAXTEKPGG---QTN 142

Query: 182 GNNFCTFCHRSGHGISTCFAKNGYPEWWXXXXXXXXXXXXLKASGPHRPGAQRGPAQPGR 361
            +  CT C ++GH ++ CF   GYP+WW               +     GA  G      
Sbjct: 143 KSGSCTHCGKTGHDVADCFQLKGYPDWWPTRQMGRGRGRGRGRNSYAGRGATSGRVHYXN 202

Query: 362 AL-EAYSPSLSTS-----SYNAGGSLSDVEWQKLKIMLRASDVGAEDRLTG 496
           A+ EA +             N    L+D  +QKL  +LR     AE +LTG
Sbjct: 203 AVAEADTQEKGQCVGHDVERNIIPGLNDDNFQKLMALLRNGSSNAE-KLTG 252


>gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
          Length = 1468

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 48/184 (26%), Positives = 75/184 (40%), Gaps = 19/184 (10%)
 Frame = +2

Query: 8   LRSSLLSQDPPFTLDRAYHAMLQEEQLQSKWGFSIDRDEVMAMAAQAPSHGKV------- 166
           +RSSL S+ P   L+  Y+ + QEE + +    + +R +V A A Q     +V       
Sbjct: 205 IRSSLTSRVPLPGLEEVYNIVRQEEDMVNNRSSNEERTDVTAFAVQMRPRSEVISEKFAN 264

Query: 167 DLRTKGNNFCTFCHRSGHGISTCFAKNGYPEWWXXXXXXXXXXXXLKASGPHR--PGAQR 340
             + +    CT C+R GH    CF   GYPEWW              + G  R  PG   
Sbjct: 265 SEKLQNKKLCTHCNRGGHSPENCFVLIGYPEWWGDRPRGKSNSNGSTSRGRGRFGPGFNG 324

Query: 341 GPAQPG----------RALEAYSPSLSTSSYNAGGSLSDVEWQKLKIMLRASDVGAEDRL 490
           G  +P            + E  +  ++ S  +A   L+D +W+ +  +L A   G  D  
Sbjct: 325 GQPRPTYVNVVMTGPFPSSEHVNRVITDSDRDAVSGLTDEQWRGVVKLLNA---GRSDNK 381

Query: 491 TGPH 502
           +  H
Sbjct: 382 SNAH 385


>ref|XP_003549005.1| PREDICTED: uncharacterized protein LOC100789964 [Glycine max]
          Length = 2412

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 44/162 (27%), Positives = 71/162 (43%), Gaps = 13/162 (8%)
 Frame = +2

Query: 8   LRSSLLSQDPPFTLDRAYHAMLQEEQ---LQSKWGFSIDRDEVMAMAAQAPSHGKVDLRT 178
           +RS ++   P  TLD A++ +LQ+E+   L S    SI+    +   +Q PS    +   
Sbjct: 452 VRSQIMLMSPLPTLDNAFNLILQQERQFNLPSTTDSSIENQSSVNHFSQTPSRPSNNFGR 511

Query: 179 ----------KGNNFCTFCHRSGHGISTCFAKNGYPEWWXXXXXXXXXXXXLKASGPHRP 328
                     +GN  CT C+R+ H + TCF K+GYP  +             K++     
Sbjct: 512 GCGRGYSSGGRGNRLCTHCNRTNHTVETCFIKHGYPPGFQHR----------KSNSSGNA 561

Query: 329 GAQRGPAQPGRALEAYSPSLSTSSYNAGGSLSDVEWQKLKIM 454
                    G A  + S S STS+  +  SLS ++ Q  +I+
Sbjct: 562 SVVNSVQDAGSAHISSSSSASTSTNGSSASLSTIQEQYTQIL 603


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