BLASTX nr result

ID: Lithospermum22_contig00033887 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00033887
         (748 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF03493.1| Ku70 homolog [Populus nigra]                          367   1e-99
ref|XP_002317447.1| predicted protein [Populus trichocarpa] gi|2...   367   1e-99
ref|XP_002521532.1| ku P70 DNA helicase, putative [Ricinus commu...   355   6e-96
ref|XP_004152086.1| PREDICTED: ATP-dependent DNA helicase 2 subu...   346   3e-93
ref|XP_004161593.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependen...   345   6e-93

>dbj|BAF03493.1| Ku70 homolog [Populus nigra]
          Length = 627

 Score =  367 bits (943), Expect = 1e-99
 Identities = 177/224 (79%), Positives = 204/224 (91%)
 Frame = +1

Query: 55  NEYYQEKYATKELCVYLIDASPKMFSTTCPSDNQKDISHFRVAISCIAQSLKTQIINRSY 234
           +E+YQ++ ++KE  VYL+DASPKMFS+TCPS++ K+ +HF++AISCIAQSLKTQIINRSY
Sbjct: 18  SEFYQQRESSKEFVVYLVDASPKMFSSTCPSEDGKEETHFQIAISCIAQSLKTQIINRSY 77

Query: 235 DEVAICFFNTREKKNLQDLNGVYVFNVADREDLDRPTARLIKEFDCIEENFIKDIGSKYG 414
           DEVAICFFNTREKKNLQDLNG +VFNVA+RE LDRPTARLIK+FDCIEE+F KDIGS+YG
Sbjct: 78  DEVAICFFNTREKKNLQDLNGAFVFNVAEREYLDRPTARLIKDFDCIEESFTKDIGSQYG 137

Query: 415 ISPGSRDNSLYNALWVAQALLRKGSPKTTDKRMLLLTNEDDPFGNLKGATKIDMMRTTMQ 594
           I  GSR+NSLYNALW+AQALLRKGS KT DKR+LL TNEDDPFG++KG  K DM RTT+Q
Sbjct: 138 IVSGSRENSLYNALWIAQALLRKGSAKTADKRILLFTNEDDPFGSIKGVAKADMTRTTLQ 197

Query: 595 RAKDAQDLGISIELLPLSIPDEEFNVTLFYSDLLGLGGDELTQF 726
           RAKDAQDLGISIELLPLS PDEEFNV+LFYSDL+GL GDEL QF
Sbjct: 198 RAKDAQDLGISIELLPLSQPDEEFNVSLFYSDLIGLEGDELAQF 241


>ref|XP_002317447.1| predicted protein [Populus trichocarpa] gi|222860512|gb|EEE98059.1|
           predicted protein [Populus trichocarpa]
          Length = 628

 Score =  367 bits (942), Expect = 1e-99
 Identities = 177/224 (79%), Positives = 203/224 (90%)
 Frame = +1

Query: 55  NEYYQEKYATKELCVYLIDASPKMFSTTCPSDNQKDISHFRVAISCIAQSLKTQIINRSY 234
           +E+YQ++ ++KE  VYL+DASPKMFS+TCPS++ K+ +HF +AISCIAQSLKTQIINRSY
Sbjct: 18  SEFYQQRESSKEFVVYLVDASPKMFSSTCPSEDGKEETHFHIAISCIAQSLKTQIINRSY 77

Query: 235 DEVAICFFNTREKKNLQDLNGVYVFNVADREDLDRPTARLIKEFDCIEENFIKDIGSKYG 414
           DEVAICFFNTREKKNLQDLNG +VFNVA+RE LDRPTARLIK+FDCIEE+F KDIGS+YG
Sbjct: 78  DEVAICFFNTREKKNLQDLNGAFVFNVAEREYLDRPTARLIKDFDCIEESFTKDIGSQYG 137

Query: 415 ISPGSRDNSLYNALWVAQALLRKGSPKTTDKRMLLLTNEDDPFGNLKGATKIDMMRTTMQ 594
           I  GSR+NSLYNALW+AQALLRKGS KT DKR+LL TNEDDPFG++KG  K DM RTT+Q
Sbjct: 138 IVSGSRENSLYNALWIAQALLRKGSAKTADKRILLFTNEDDPFGSIKGVAKADMTRTTLQ 197

Query: 595 RAKDAQDLGISIELLPLSIPDEEFNVTLFYSDLLGLGGDELTQF 726
           RAKDAQDLGISIELLPLS PDEEFNV+LFYSDL+GL GDEL QF
Sbjct: 198 RAKDAQDLGISIELLPLSQPDEEFNVSLFYSDLIGLEGDELAQF 241


>ref|XP_002521532.1| ku P70 DNA helicase, putative [Ricinus communis]
           gi|223539210|gb|EEF40803.1| ku P70 DNA helicase,
           putative [Ricinus communis]
          Length = 626

 Score =  355 bits (911), Expect = 6e-96
 Identities = 170/224 (75%), Positives = 205/224 (91%)
 Frame = +1

Query: 55  NEYYQEKYATKELCVYLIDASPKMFSTTCPSDNQKDISHFRVAISCIAQSLKTQIINRSY 234
           +++YQ++ ++KE  VYL+DASPKMF+TT P+++QKD +HF +A+S IAQSLKTQIINRSY
Sbjct: 18  SDFYQQRESSKEFVVYLVDASPKMFTTTFPAEDQKDETHFHIAVSSIAQSLKTQIINRSY 77

Query: 235 DEVAICFFNTREKKNLQDLNGVYVFNVADREDLDRPTARLIKEFDCIEENFIKDIGSKYG 414
           DEVAICFFNTREK+NLQDLNGV+V+NVA+RE LDRPTARLIK+FDCIEE+F+K+IGS+YG
Sbjct: 78  DEVAICFFNTREKRNLQDLNGVFVYNVAEREYLDRPTARLIKDFDCIEESFMKEIGSQYG 137

Query: 415 ISPGSRDNSLYNALWVAQALLRKGSPKTTDKRMLLLTNEDDPFGNLKGATKIDMMRTTMQ 594
           I  GSR+NSLYNALWVAQALLRKGS KT DKR+LLLTNEDDPFG+++GA K DM RTT+Q
Sbjct: 138 IVSGSRENSLYNALWVAQALLRKGSAKTADKRILLLTNEDDPFGSMQGAAKTDMTRTTLQ 197

Query: 595 RAKDAQDLGISIELLPLSIPDEEFNVTLFYSDLLGLGGDELTQF 726
           RAKDAQDLGISIELLPLS PDEEF+++LFY+ L+GL GDEL QF
Sbjct: 198 RAKDAQDLGISIELLPLSQPDEEFHISLFYAGLIGLEGDELAQF 241


>ref|XP_004152086.1| PREDICTED: ATP-dependent DNA helicase 2 subunit KU70-like [Cucumis
           sativus]
          Length = 625

 Score =  346 bits (887), Expect = 3e-93
 Identities = 166/231 (71%), Positives = 203/231 (87%)
 Frame = +1

Query: 55  NEYYQEKYATKELCVYLIDASPKMFSTTCPSDNQKDISHFRVAISCIAQSLKTQIINRSY 234
           N ++QE+ +TKEL VYL+DASPKMF+TTC S+++K+ +HF+VA+SCI+QSLKTQIINRSY
Sbjct: 18  NPFFQERESTKELAVYLVDASPKMFTTTCLSEDKKEETHFQVALSCISQSLKTQIINRSY 77

Query: 235 DEVAICFFNTREKKNLQDLNGVYVFNVADREDLDRPTARLIKEFDCIEENFIKDIGSKYG 414
           DEVAICFFNTREKKNLQDLNGV+V NV +REDLDRPTARL+K  D IEE F+K+IGS+YG
Sbjct: 78  DEVAICFFNTREKKNLQDLNGVFVLNVPEREDLDRPTARLLKTIDGIEEVFMKEIGSQYG 137

Query: 415 ISPGSRDNSLYNALWVAQALLRKGSPKTTDKRMLLLTNEDDPFGNLKGATKIDMMRTTMQ 594
           I  GSR+N+LYNALW AQALLRKGS KT DKR+LL TNEDDPFG++KGATK D++RTT+Q
Sbjct: 138 IVSGSRENALYNALWAAQALLRKGSAKTLDKRILLFTNEDDPFGSIKGATKFDLIRTTLQ 197

Query: 595 RAKDAQDLGISIELLPLSIPDEEFNVTLFYSDLLGLGGDELTQFKAFVSER 747
           RAKDAQDLGISIEL PLS P+E+FN++LFY+DL+GL G +L Q+     +R
Sbjct: 198 RAKDAQDLGISIELFPLSCPNEQFNLSLFYADLVGLEGGDLVQYLPSAGDR 248


>ref|XP_004161593.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent DNA helicase 2
           subunit KU70-like [Cucumis sativus]
          Length = 625

 Score =  345 bits (885), Expect = 6e-93
 Identities = 166/231 (71%), Positives = 202/231 (87%)
 Frame = +1

Query: 55  NEYYQEKYATKELCVYLIDASPKMFSTTCPSDNQKDISHFRVAISCIAQSLKTQIINRSY 234
           N ++QE+ +TKEL VYL+DASPKMF+TTC S++ K+ +HF+VA+SCI+QSLKTQIINRSY
Sbjct: 18  NPFFQERESTKELAVYLVDASPKMFTTTCLSEDXKEETHFQVALSCISQSLKTQIINRSY 77

Query: 235 DEVAICFFNTREKKNLQDLNGVYVFNVADREDLDRPTARLIKEFDCIEENFIKDIGSKYG 414
           DEVAICFFNTREKKNLQDLNGV+V NV +REDLDRPTARL+K  D IEE F+K+IGS+YG
Sbjct: 78  DEVAICFFNTREKKNLQDLNGVFVLNVPEREDLDRPTARLLKTIDGIEEVFMKEIGSQYG 137

Query: 415 ISPGSRDNSLYNALWVAQALLRKGSPKTTDKRMLLLTNEDDPFGNLKGATKIDMMRTTMQ 594
           I  GSR+N+LYNALW AQALLRKGS KT DKR+LL TNEDDPFG++KGATK D++RTT+Q
Sbjct: 138 IVSGSRENALYNALWAAQALLRKGSAKTLDKRILLFTNEDDPFGSIKGATKFDLIRTTLQ 197

Query: 595 RAKDAQDLGISIELLPLSIPDEEFNVTLFYSDLLGLGGDELTQFKAFVSER 747
           RAKDAQDLGISIEL PLS P+E+FN++LFY+DL+GL G +L Q+     +R
Sbjct: 198 RAKDAQDLGISIELFPLSCPNEQFNLSLFYADLVGLEGGDLVQYLPSAGDR 248


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