BLASTX nr result

ID: Lithospermum22_contig00033843 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00033843
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531766.1| transcription factor, putative [Ricinus comm...   127   7e-28
ref|XP_002330570.1| high mobility group family [Populus trichoca...   127   9e-28
ref|XP_002264357.1| PREDICTED: high mobility group B protein 10 ...   127   9e-28
gb|AFK33347.1| unknown [Medicago truncatula]                          112   3e-23
ref|XP_003522831.1| PREDICTED: LOW QUALITY PROTEIN: high mobilit...   111   7e-23

>ref|XP_002531766.1| transcription factor, putative [Ricinus communis]
           gi|223528602|gb|EEF30622.1| transcription factor,
           putative [Ricinus communis]
          Length = 313

 Score =  127 bits (320), Expect = 7e-28
 Identities = 56/87 (64%), Positives = 72/87 (82%)
 Frame = -3

Query: 262 EYHEIAQNLDLFWEKVIIFHEYLGTKFKVPTIGGKSVDLHRLFVEVTSRGGIEKAIRDRR 83
           ++ ++ Q+ DLFWEK+  FH+  GTKF VPT+GGK++DLH LFVEVTSRGG+EK +RDR+
Sbjct: 36  QFEDVVQSSDLFWEKLKSFHKSFGTKFMVPTVGGKALDLHHLFVEVTSRGGLEKVVRDRK 95

Query: 82  WREVTAAFKFPSSLTSGSFALRKCYLS 2
           W+EV AAF FPS++TS SF LRK YLS
Sbjct: 96  WKEVIAAFNFPSTITSASFVLRKYYLS 122


>ref|XP_002330570.1| high mobility group family [Populus trichocarpa]
           gi|222872128|gb|EEF09259.1| high mobility group family
           [Populus trichocarpa]
          Length = 316

 Score =  127 bits (319), Expect = 9e-28
 Identities = 58/87 (66%), Positives = 71/87 (81%)
 Frame = -3

Query: 262 EYHEIAQNLDLFWEKVIIFHEYLGTKFKVPTIGGKSVDLHRLFVEVTSRGGIEKAIRDRR 83
           +Y +IAQ+ DLFWEK+  FH+  GTKF VPT+GGK++DLH LFVEVTSRGGIEK I DR+
Sbjct: 37  KYEDIAQSSDLFWEKLKAFHQSFGTKFMVPTVGGKALDLHHLFVEVTSRGGIEKVITDRK 96

Query: 82  WREVTAAFKFPSSLTSGSFALRKCYLS 2
           W+EV  AF FP+++TS SF LRK YLS
Sbjct: 97  WKEVITAFNFPTTITSASFVLRKHYLS 123


>ref|XP_002264357.1| PREDICTED: high mobility group B protein 10 [Vitis vinifera]
           gi|296090037|emb|CBI39856.3| unnamed protein product
           [Vitis vinifera]
          Length = 331

 Score =  127 bits (319), Expect = 9e-28
 Identities = 57/87 (65%), Positives = 70/87 (80%)
 Frame = -3

Query: 262 EYHEIAQNLDLFWEKVIIFHEYLGTKFKVPTIGGKSVDLHRLFVEVTSRGGIEKAIRDRR 83
           +Y E+ Q+ DLFW+ +  FH   GTKF VPT GGK++DLHRLFVEVTSRGG+EK IRDR+
Sbjct: 46  QYQEVVQSADLFWQTLKDFHRSFGTKFMVPTTGGKALDLHRLFVEVTSRGGLEKVIRDRK 105

Query: 82  WREVTAAFKFPSSLTSGSFALRKCYLS 2
           W+EVT  FKFP+++TS SF LRK YLS
Sbjct: 106 WKEVTTVFKFPTTITSASFVLRKYYLS 132


>gb|AFK33347.1| unknown [Medicago truncatula]
          Length = 185

 Score =  112 bits (280), Expect = 3e-23
 Identities = 52/86 (60%), Positives = 68/86 (79%)
 Frame = -3

Query: 259 YHEIAQNLDLFWEKVIIFHEYLGTKFKVPTIGGKSVDLHRLFVEVTSRGGIEKAIRDRRW 80
           Y ++ ++ +LF +K+  FH+ LGTK K+PTIGGKS+DLH LFVEVTSRGGIEK I DR+W
Sbjct: 36  YSDLVRDSNLFQQKLQSFHDSLGTKLKIPTIGGKSLDLHHLFVEVTSRGGIEKVIVDRKW 95

Query: 79  REVTAAFKFPSSLTSGSFALRKCYLS 2
           +EV  +F F  ++TSGSF +RK YLS
Sbjct: 96  KEVIMSFNFRDTITSGSFMVRKTYLS 121


>ref|XP_003522831.1| PREDICTED: LOW QUALITY PROTEIN: high mobility group B protein
           10-like [Glycine max]
          Length = 283

 Score =  111 bits (277), Expect = 7e-23
 Identities = 51/86 (59%), Positives = 65/86 (75%)
 Frame = -3

Query: 259 YHEIAQNLDLFWEKVIIFHEYLGTKFKVPTIGGKSVDLHRLFVEVTSRGGIEKAIRDRRW 80
           Y +I ++ +LFW  +  FH+ LGTK+KV T+GG S+DLHRLFVEVTSRGGIEK I DR+W
Sbjct: 48  YQDIVRDANLFWGTLQAFHKILGTKYKVATVGGTSLDLHRLFVEVTSRGGIEKVIVDRKW 107

Query: 79  REVTAAFKFPSSLTSGSFALRKCYLS 2
           +EV   F F  ++TS SF +RK YLS
Sbjct: 108 KEVILTFNFKDTITSASFVVRKSYLS 133


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