BLASTX nr result

ID: Lithospermum22_contig00033840 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00033840
         (503 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAM36554.1| phytochrome A [Fragaria x ananassa]                   112   3e-23
sp|P30733.2|PHYA_SOLTU RecName: Full=Phytochrome A gi|7550158|gb...   109   2e-22
ref|NP_001234490.1| alternative transcript type 3 [Solanum lycop...   109   2e-22
sp|P33530.1|PHYA1_TOBAC RecName: Full=Phytochrome A1 gi|297478|e...   109   3e-22
gb|AAR08425.1| phytochrome A [Cuscuta pentagona]                      106   2e-21

>dbj|BAM36554.1| phytochrome A [Fragaria x ananassa]
          Length = 1124

 Score =  112 bits (280), Expect = 3e-23
 Identities = 56/72 (77%), Positives = 65/72 (90%)
 Frame = -3

Query: 501  LAHLQFKISHSGGRVPEELLNQMFGSEPEASDEGISLLISRKLVKLMNGDVQYLRESAGS 322
            LAHL+F+ISH+GG VPEELLNQMFG++ + S+EGISLLISRKLVKLMNGDVQYLRE+  S
Sbjct: 1049 LAHLEFRISHAGGGVPEELLNQMFGTDGDISEEGISLLISRKLVKLMNGDVQYLREAGKS 1108

Query: 321  TFIISVELAIAN 286
            TFIIS ELA A+
Sbjct: 1109 TFIISAELAAAH 1120


>sp|P30733.2|PHYA_SOLTU RecName: Full=Phytochrome A gi|7550158|gb|AAB21533.2| type A
            phytochrome [Solanum tuberosum]
          Length = 1123

 Score =  109 bits (273), Expect = 2e-22
 Identities = 55/71 (77%), Positives = 65/71 (91%)
 Frame = -3

Query: 501  LAHLQFKISHSGGRVPEELLNQMFGSEPEASDEGISLLISRKLVKLMNGDVQYLRESAGS 322
            LA L+F+I H+GG VPEELL+QMFGSE +AS+EGISLL+SRKLVKLMNG+VQYLRE+  S
Sbjct: 1049 LALLEFRIRHTGGGVPEELLSQMFGSEADASEEGISLLVSRKLVKLMNGEVQYLREAGRS 1108

Query: 321  TFIISVELAIA 289
            TFIISVELA+A
Sbjct: 1109 TFIISVELAVA 1119


>ref|NP_001234490.1| alternative transcript type 3 [Solanum lycopersicum]
            gi|3492795|emb|CAA05086.1| phyA [Solanum lycopersicum]
            gi|3492797|emb|CAA05087.1| phyA [Solanum lycopersicum]
            gi|3492799|emb|CAA05088.1| phyA [Solanum lycopersicum]
            gi|3492801|emb|CAA05089.1| phyA [Solanum lycopersicum]
          Length = 1123

 Score =  109 bits (273), Expect = 2e-22
 Identities = 55/74 (74%), Positives = 65/74 (87%)
 Frame = -3

Query: 501  LAHLQFKISHSGGRVPEELLNQMFGSEPEASDEGISLLISRKLVKLMNGDVQYLRESAGS 322
            LA L+F+I H+GG VPEELL QMFGSE +AS+EGISLL+SRKLVKLMNG+VQYLRE+  S
Sbjct: 1049 LALLEFRIRHTGGGVPEELLGQMFGSEADASEEGISLLVSRKLVKLMNGEVQYLREAGQS 1108

Query: 321  TFIISVELAIANTT 280
            TFIISVELA+A  +
Sbjct: 1109 TFIISVELAVATNS 1122


>sp|P33530.1|PHYA1_TOBAC RecName: Full=Phytochrome A1 gi|297478|emb|CAA47284.1| type-A
            phytochrome [Nicotiana tabacum]
          Length = 1124

 Score =  109 bits (272), Expect = 3e-22
 Identities = 56/71 (78%), Positives = 65/71 (91%)
 Frame = -3

Query: 501  LAHLQFKISHSGGRVPEELLNQMFGSEPEASDEGISLLISRKLVKLMNGDVQYLRESAGS 322
            LA L+ +ISH+GG VPEELL+QMFG+E EAS+EGISLLISRKLVKLMNG+VQYLRE+  S
Sbjct: 1049 LALLEVRISHTGGGVPEELLSQMFGTEAEASEEGISLLISRKLVKLMNGEVQYLREAGRS 1108

Query: 321  TFIISVELAIA 289
            TFIISVELA+A
Sbjct: 1109 TFIISVELAVA 1119


>gb|AAR08425.1| phytochrome A [Cuscuta pentagona]
          Length = 1119

 Score =  106 bits (264), Expect = 2e-21
 Identities = 52/71 (73%), Positives = 62/71 (87%)
 Frame = -3

Query: 501  LAHLQFKISHSGGRVPEELLNQMFGSEPEASDEGISLLISRKLVKLMNGDVQYLRESAGS 322
            LAHL+F+++HSGG VPEELL QMFGS+ +A +EGISLL+SR LVKLMNGDVQY RE+  S
Sbjct: 1044 LAHLEFRVTHSGGGVPEELLTQMFGSDVDALEEGISLLVSRNLVKLMNGDVQYHREAGRS 1103

Query: 321  TFIISVELAIA 289
             FIISVELA+A
Sbjct: 1104 AFIISVELAVA 1114


Top