BLASTX nr result

ID: Lithospermum22_contig00033839 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00033839
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containi...   181   4e-44
emb|CBI27939.3| unnamed protein product [Vitis vinifera]              181   4e-44
ref|XP_002330519.1| predicted protein [Populus trichocarpa] gi|2...   181   4e-44
ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat...   174   7e-42
ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat...   174   7e-42

>ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 1005

 Score =  181 bits (460), Expect = 4e-44
 Identities = 81/128 (63%), Positives = 104/128 (81%)
 Frame = -1

Query: 384  EPGCSWVEIDSQVHVFVSRDTSHPRVRDIYQKLEELGQELTSAGYTPNVKCVLHNVSDGE 205
            EPGCSWVE++ QVHVF+S D SHP++R+I+ KL++L Q+L S GYTPN   VLHNVSD E
Sbjct: 870  EPGCSWVEVNGQVHVFLSHDGSHPKIREIHLKLQDLHQKLMSVGYTPNTDHVLHNVSDRE 929

Query: 204  KEKILSYHSERLALGFALISNIPSDRVRIFKNLRVCDDCHEYMKRVSLVTNKEIVVRDIK 25
            K+++L YHSERLAL FAL+S      +RIFKNLR+C DCH++MK +S +TN+E+VVRDI 
Sbjct: 930  KQELLFYHSERLALAFALLSTSTRKTIRIFKNLRICGDCHDFMKSISEITNQELVVRDIN 989

Query: 24   RFHHFQNG 1
             FHHF+NG
Sbjct: 990  CFHHFKNG 997


>emb|CBI27939.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  181 bits (460), Expect = 4e-44
 Identities = 81/128 (63%), Positives = 104/128 (81%)
 Frame = -1

Query: 384  EPGCSWVEIDSQVHVFVSRDTSHPRVRDIYQKLEELGQELTSAGYTPNVKCVLHNVSDGE 205
            EPGCSWVE++ QVHVF+S D SHP++R+I+ KL++L Q+L S GYTPN   VLHNVSD E
Sbjct: 629  EPGCSWVEVNGQVHVFLSHDGSHPKIREIHLKLQDLHQKLMSVGYTPNTDHVLHNVSDRE 688

Query: 204  KEKILSYHSERLALGFALISNIPSDRVRIFKNLRVCDDCHEYMKRVSLVTNKEIVVRDIK 25
            K+++L YHSERLAL FAL+S      +RIFKNLR+C DCH++MK +S +TN+E+VVRDI 
Sbjct: 689  KQELLFYHSERLALAFALLSTSTRKTIRIFKNLRICGDCHDFMKSISEITNQELVVRDIN 748

Query: 24   RFHHFQNG 1
             FHHF+NG
Sbjct: 749  CFHHFKNG 756


>ref|XP_002330519.1| predicted protein [Populus trichocarpa] gi|222872453|gb|EEF09584.1|
           predicted protein [Populus trichocarpa]
          Length = 726

 Score =  181 bits (460), Expect = 4e-44
 Identities = 82/128 (64%), Positives = 104/128 (81%)
 Frame = -1

Query: 384 EPGCSWVEIDSQVHVFVSRDTSHPRVRDIYQKLEELGQELTSAGYTPNVKCVLHNVSDGE 205
           EPGCSWVE+D QVHVF+S+D SHP++R+IY KL++LGQ L S GY P  + VLHNVS+ E
Sbjct: 591 EPGCSWVEVDGQVHVFLSQDGSHPKIREIYAKLDKLGQSLMSIGYVPKTEVVLHNVSNKE 650

Query: 204 KEKILSYHSERLALGFALISNIPSDRVRIFKNLRVCDDCHEYMKRVSLVTNKEIVVRDIK 25
           K + L YHSERLAL FAL+S      +RIFKNLR+C+DCH++MK +S +TN+EIVVRDI+
Sbjct: 651 KMEHLYYHSERLALSFALLSTNAVKPIRIFKNLRICEDCHDFMKLISDITNQEIVVRDIR 710

Query: 24  RFHHFQNG 1
           RFHHF+ G
Sbjct: 711 RFHHFKRG 718


>ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Cucumis sativus]
          Length = 1004

 Score =  174 bits (441), Expect = 7e-42
 Identities = 78/128 (60%), Positives = 101/128 (78%)
 Frame = -1

Query: 384  EPGCSWVEIDSQVHVFVSRDTSHPRVRDIYQKLEELGQELTSAGYTPNVKCVLHNVSDGE 205
            EPGCSWVE + QVH FVS D SHP++++I+ KL+EL +EL S  Y P  + VLHNV + E
Sbjct: 854  EPGCSWVEANGQVHTFVSHDYSHPQIQEIHLKLDELDRELASIQYVPKTEYVLHNVGETE 913

Query: 204  KEKILSYHSERLALGFALISNIPSDRVRIFKNLRVCDDCHEYMKRVSLVTNKEIVVRDIK 25
            K++ L +HSERLALGFALIS     ++RIFKNLR+C DCH+ MK +S +TN+EIVVRD++
Sbjct: 914  KKENLRFHSERLALGFALISTSSEKKIRIFKNLRICRDCHDVMKHISSITNQEIVVRDVR 973

Query: 24   RFHHFQNG 1
            RFHHF+NG
Sbjct: 974  RFHHFKNG 981


>ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Cucumis sativus]
          Length = 989

 Score =  174 bits (441), Expect = 7e-42
 Identities = 78/128 (60%), Positives = 101/128 (78%)
 Frame = -1

Query: 384  EPGCSWVEIDSQVHVFVSRDTSHPRVRDIYQKLEELGQELTSAGYTPNVKCVLHNVSDGE 205
            EPGCSWVE + QVH FVS D SHP++++I+ KL+EL +EL S  Y P  + VLHNV + E
Sbjct: 854  EPGCSWVEANGQVHTFVSHDYSHPQIQEIHLKLDELDRELASIQYVPKTEYVLHNVGETE 913

Query: 204  KEKILSYHSERLALGFALISNIPSDRVRIFKNLRVCDDCHEYMKRVSLVTNKEIVVRDIK 25
            K++ L +HSERLALGFALIS     ++RIFKNLR+C DCH+ MK +S +TN+EIVVRD++
Sbjct: 914  KKENLRFHSERLALGFALISTSSEKKIRIFKNLRICRDCHDVMKHISSITNQEIVVRDVR 973

Query: 24   RFHHFQNG 1
            RFHHF+NG
Sbjct: 974  RFHHFKNG 981


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