BLASTX nr result

ID: Lithospermum22_contig00033802 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00033802
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22267.3| unnamed protein product [Vitis vinifera]               86   4e-15
ref|XP_002284104.1| PREDICTED: lamin-like protein [Vitis vinifera]     86   4e-15
ref|XP_002324082.1| predicted protein [Populus trichocarpa] gi|1...    82   5e-14
gb|ADV57639.1| copper binding protein 4 [Gossypium hirsutum]           81   8e-14
ref|NP_001237157.1| uncharacterized protein LOC100305564 precurs...    81   1e-13

>emb|CBI22267.3| unnamed protein product [Vitis vinifera]
          Length = 159

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 44/81 (54%), Positives = 57/81 (70%)
 Frame = -2

Query: 351 GAGRDVVPLNVTKTYYFISGKGFCYSGMKVAIXXXXXXXXXXXXPMKSTGVPRLLTSFRG 172
           GAGRDVVPLNVT+ YYF+SGKGFCYSGMK+AI            P+K +      +++RG
Sbjct: 79  GAGRDVVPLNVTRKYYFLSGKGFCYSGMKIAINVENPPPPPSASPIKESN-DSPSSNYRG 137

Query: 171 RIRVSTLFAIAAVWDAFIFLW 109
           +I V  +FAIAAVWD+F+ L+
Sbjct: 138 QIVVPAVFAIAAVWDSFLRLY 158


>ref|XP_002284104.1| PREDICTED: lamin-like protein [Vitis vinifera]
          Length = 171

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 44/81 (54%), Positives = 57/81 (70%)
 Frame = -2

Query: 351 GAGRDVVPLNVTKTYYFISGKGFCYSGMKVAIXXXXXXXXXXXXPMKSTGVPRLLTSFRG 172
           GAGRDVVPLNVT+ YYF+SGKGFCYSGMK+AI            P+K +      +++RG
Sbjct: 91  GAGRDVVPLNVTRKYYFLSGKGFCYSGMKIAINVENPPPPPSASPIKESN-DSPSSNYRG 149

Query: 171 RIRVSTLFAIAAVWDAFIFLW 109
           +I V  +FAIAAVWD+F+ L+
Sbjct: 150 QIVVPAVFAIAAVWDSFLRLY 170


>ref|XP_002324082.1| predicted protein [Populus trichocarpa] gi|118482789|gb|ABK93312.1|
           unknown [Populus trichocarpa]
           gi|222867084|gb|EEF04215.1| predicted protein [Populus
           trichocarpa]
          Length = 176

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 42/82 (51%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
 Frame = -2

Query: 351 GAGRDVVPLNVTKTYYFISGKGFCYSGMKVAIXXXXXXXXXXXXPM-KSTGVPRLLTSFR 175
           GAGRDVVPLNVT+ YYFISGKGFCY GMK+A+            P+ + +G P  +  FR
Sbjct: 97  GAGRDVVPLNVTRNYYFISGKGFCYGGMKLAVHVENPPPPPTASPLDEKSGSPSSI--FR 154

Query: 174 GRIRVSTLFAIAAVWDAFIFLW 109
            +  + T+FAI A+WDAF+  W
Sbjct: 155 SQYVLPTVFAIGALWDAFVRFW 176


>gb|ADV57639.1| copper binding protein 4 [Gossypium hirsutum]
          Length = 175

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 42/83 (50%), Positives = 54/83 (65%), Gaps = 2/83 (2%)
 Frame = -2

Query: 351 GAGRDVVPLNVTKTYYFISGKGFCYSGMKVAIXXXXXXXXXXXXPM--KSTGVPRLLTSF 178
           GAGRDVVPLNVT+ YYFISGKGFCY GMK+A+            P+  KS   P  +  +
Sbjct: 94  GAGRDVVPLNVTRHYYFISGKGFCYGGMKLAVRVENPPPPPKAAPLNEKSGSSPSSIV-Y 152

Query: 177 RGRIRVSTLFAIAAVWDAFIFLW 109
           RG++ +   FAIAA+WD F+ +W
Sbjct: 153 RGQLVLPAAFAIAALWDTFVRIW 175


>ref|NP_001237157.1| uncharacterized protein LOC100305564 precursor [Glycine max]
           gi|255625927|gb|ACU13308.1| unknown [Glycine max]
          Length = 169

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 43/81 (53%), Positives = 52/81 (64%)
 Frame = -2

Query: 351 GAGRDVVPLNVTKTYYFISGKGFCYSGMKVAIXXXXXXXXXXXXPMKSTGVPRLLTSFRG 172
           GAGRDVVPLNVTKTYY ISG+GFC+SGMK+A+            P+KS   P L +  R 
Sbjct: 91  GAGRDVVPLNVTKTYYIISGRGFCFSGMKIAVHVEKLPPPPKAVPVKS-AAPTLFSQDR- 148

Query: 171 RIRVSTLFAIAAVWDAFIFLW 109
            + +  +FAI A WDAFI  W
Sbjct: 149 ILLMPVVFAIGAAWDAFIHFW 169


Top