BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00033767
         (654 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...   121   1e-25
emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal...   119   4e-25
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]               114   2e-23
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...   113   3e-23
gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thal...   110   2e-22

>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score =  121 bits (304), Expect = 1e-25
 Identities = 69/203 (33%), Positives = 102/203 (50%), Gaps = 10/203 (4%)
 Frame = -1

Query: 603  MVRAFLWKGVAQGRYATKVSWSTLSLPKEEGGLGIKNLKLWNQACMAQYLWDISSHKESL 424
            M  AFLW G        K+SW  +  PK+EGGLG+++LK  N  C  + +W I SH  SL
Sbjct: 842  MCSAFLWSGTEMNSNKAKISWHMVCKPKDEGGLGLRSLKEANDVCCLKLVWKIVSHSNSL 901

Query: 423  WIKWVVVFRLKGRSLWSIFPK-STNC*L*KKLLQHRDTIRGLVQVEVGNGVSTSFWHDMW 247
            W+KWV    L+  S W +    S    + KKLL++R+  + L +VEVGNG  TSFW+D W
Sbjct: 902  WVKWVDQHLLRNASFWEVKQTVSQGSWIWKKLLKYREVAKTLSKVEVGNGKQTSFWYDNW 961

Query: 246  HTKGVLDVVVTNVAKRSREYLMIQVWL---RSLSDRWPKGRHCTHE------IQDLIAGV 94
               G L        +R+ +  +I + +    ++ + W   R   H       I+D +   
Sbjct: 962  SDLGQL-------LERTGDRGLIDLGISRRMTVEEAWTNRRQRRHRNDVYNVIEDALKKS 1014

Query: 93   PHLRMDVQDKVKWKGYGSVVKAT 25
               R + +DKV W+G   V + T
Sbjct: 1015 WDTRTETEDKVLWRGKSDVFRTT 1037


>emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana]
           gi|7267919|emb|CAB78261.1| putative reverse
           transcriptase [Arabidopsis thaliana]
          Length = 662

 Score =  119 bits (299), Expect = 4e-25
 Identities = 66/206 (32%), Positives = 106/206 (51%), Gaps = 9/206 (4%)
 Frame = -1

Query: 594 AFLWKGVAQGRYATKVSWSTLSLPKEEGGLGIKNLKLWNQACMAQYLWDISSHKESLWIK 415
           AFLW G        K++W T+  PK EGGLG++++K  N  C  + +W I S  +SLW++
Sbjct: 363 AFLWSGPELSTNKAKIAWETVCRPKREGGLGLQSIKEANDVCCLKLIWRIVSQGDSLWVQ 422

Query: 414 WVVVFRLKGRSLWSIFPKSTNC*L*KKLLQHRDTIRGLVQVEVGNGVSTSFWHDMWHTKG 235
           W+  + LK  + WS    S    + KKLL++RDT +   +V++ NG + SFW+D W +KG
Sbjct: 423 WIRTYLLKRNTFWSFRSASQGSWMWKKLLKYRDTAKAFSKVDIRNGETASFWYDDWSSKG 482

Query: 234 VLDVVVTNVAKRSREYLMIQVWLRSLSDRWPKGRHCTHEIQDLIAGVPHL------RMDV 73
            L     +V     ++ M     ++L++ W + R   H  + L      L      R+ V
Sbjct: 483 RL----IDVLGERGQFDMGISKFKTLAEAWDRRRSRYHRAETLNTIEQELLLAKQNRVAV 538

Query: 72  QDKVKWKGYGSVVK---ATTIWRSLA 4
           +D   WKG     +   +  IW++LA
Sbjct: 539 EDVFLWKGKNDTFRPQFSAQIWQALA 564


>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score =  114 bits (285), Expect = 2e-23
 Identities = 67/196 (34%), Positives = 99/196 (50%), Gaps = 8/196 (4%)
 Frame = -1

Query: 594  AFLWKGVAQGRYATKVSWSTLSLPKEEGGLGIKNLKLWNQACMAQYLWDISSHKESLWIK 415
            +FLW G     +  K+SW  +  PK EGGLG++NLK  N     + +W I S+  SLW K
Sbjct: 492  SFLWSGSEMSSHKAKISWDIVCKPKAEGGLGLRNLKEANDVSCLKLVWRIISNSNSLWTK 551

Query: 414  WVVVFRLKGRSLWSIFPK-STNC*L*KKLLQHRDTIRGLVQVEVGNGVSTSFWHDMWHTK 238
            WV  + ++ +S+WS+    S    + +K+L+ RD  +   +VEVGNG S SFW+D W   
Sbjct: 552  WVAEYLIRKKSIWSLKQSTSMGSWIWRKILKIRDVAKSFSRVEVGNGESASFWYDHWSAH 611

Query: 237  GVLDVVVTNVAKRS----REYLMIQVWLRSLSDRWPKGRHCT---HEIQDLIAGVPHLRM 79
            G L   V +         RE  +   W R       + RH T   +EI++++A       
Sbjct: 612  GRLIDTVGDKGTIDLGIPREASVADAWTRR-----SRRRHRTSLLNEIEEMMAYQRIHHS 666

Query: 78   DVQDKVKWKGYGSVVK 31
            D +D V W+G   V K
Sbjct: 667  DAEDTVLWRGKNDVFK 682


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1216

 Score =  113 bits (283), Expect = 3e-23
 Identities = 67/214 (31%), Positives = 110/214 (51%), Gaps = 8/214 (3%)
 Frame = -1

Query: 645  RDTIKRLVQVGSYGMVRAFLWKGVAQGRYATKVSWSTLSLPKEEGGLGIKNLKLWNQACM 466
            R+ I  + ++ S     A LW G        KVSW  +  PK+EGGLG+++L+  N+   
Sbjct: 554  RECINEINRISS-----ALLWSGPELNPKKAKVSWDEICKPKKEGGLGLQSLREANKVSS 608

Query: 465  AQYLWDISSHKESLWIKWVVVFRLKGRSLWSIFPKST-NC*L*KKLLQHRDTIRGLVQVE 289
             + +W + S ++SLW+KW  +  LK  S WSI   ST    + ++LL+HR+  +   ++E
Sbjct: 609  LKLIWRLLSCQDSLWVKWTRMNLLKKESFWSIGTHSTLGSWIWRRLLKHREVAKSFCKIE 668

Query: 288  VGNGVSTSFWHDMWHTKGVLDVVVTNVAKRSREYLMIQVWLRSLSDRWPKGRHCTHEI-- 115
            V NGV+TSFW D W  KG L   +     R    + I   + +L++ W + R   H +  
Sbjct: 669  VNNGVNTSFWFDNWSEKGPL---INLTGARGAIDMGISRHM-TLAEAWSRRRRKRHRVEI 724

Query: 114  -----QDLIAGVPHLRMDVQDKVKWKGYGSVVKA 28
                 + L+    H  ++++D + W+G   V KA
Sbjct: 725  LNEFEEILLQKYQHRNIELEDAILWRGKEDVFKA 758


>gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thaliana]
          Length = 629

 Score =  110 bits (275), Expect = 2e-22
 Identities = 67/199 (33%), Positives = 104/199 (52%), Gaps = 9/199 (4%)
 Frame = -1

Query: 594 AFLWKGVAQGRYATKVSWSTLSLPKEEGGLGIKNLKLWNQACMAQYLWDISSHKESLWIK 415
           AFLW G    R   KVSW  +  PK+EGGLG+++L   N   + + +W ++S+ +SLW+K
Sbjct: 250 AFLWSGPELHRRKAKVSWDDICKPKQEGGLGLRSLTEANVVSVLKLIWRVTSNDDSLWVK 309

Query: 414 WVVVFRLKGRSLWSIFPKST-NC*L*KKLLQHRDTIRGLVQVEVGNGVSTSFWHDMWHTK 238
           W  +  LK  S WS+ P S+    + KK+L++R+T +   +VEV NG  TSFW D W   
Sbjct: 310 WSKMNLLKQESFWSLTPNSSLGSWMWKKMLKYRETAKPFSRVEVNNGARTSFWFDNWSGM 369

Query: 237 GVLDVVVTNVAK----RSREYLMIQVWLRSLSDRWPKGRHCTHEIQDLIAGVPH----LR 82
           G L  V     +     SR   + + W    S+R  + +H T ++ D+ A +        
Sbjct: 370 GHLMDVTGQRGQIDLGISRNKTVAEAW----SNR-RRRKHRTEQLNDIEAALNQKYQTRN 424

Query: 81  MDVQDKVKWKGYGSVVKAT 25
           +  +D   W+G G V K +
Sbjct: 425 LLREDATLWRGKGDVFKTS 443