BLASTX nr result

ID: Lithospermum22_contig00033752 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00033752
         (637 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002893572.1| hypothetical protein ARALYDRAFT_890490 [Arab...    69   7e-10
ref|NP_565785.1| uncharacterized protein [Arabidopsis thaliana] ...    68   2e-09
ref|XP_002881332.1| hypothetical protein ARALYDRAFT_482377 [Arab...    67   2e-09
gb|AFN53716.1| putative DUF584 protein [Linum usitatissimum]           67   3e-09
ref|NP_174257.1| uncharacterized protein [Arabidopsis thaliana] ...    66   6e-09

>ref|XP_002893572.1| hypothetical protein ARALYDRAFT_890490 [Arabidopsis lyrata subsp.
           lyrata] gi|297339414|gb|EFH69831.1| hypothetical protein
           ARALYDRAFT_890490 [Arabidopsis lyrata subsp. lyrata]
          Length = 139

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 40/89 (44%), Positives = 54/89 (60%), Gaps = 7/89 (7%)
 Frame = -1

Query: 247 LKSEANKRKKTCKNTI------SSVPMNIPDDKKHWFNKY-VDMEVSDEDYCGGTNFAPP 89
           L+++++KR KT           SS+P+NIP        +Y  + E SD+D  GG    PP
Sbjct: 42  LRNKSSKRTKTTSLPTAGTAFSSSLPVNIP------MRRYSTEEEYSDDD--GGRRMIPP 93

Query: 88  HVIIGHRVAGTTIPFSVCTGNGRTLKGRD 2
           H+I+G R+ G  + FSVCTGNGRTLKGRD
Sbjct: 94  HLIVGRRIEGGQMAFSVCTGNGRTLKGRD 122


>ref|NP_565785.1| uncharacterized protein [Arabidopsis thaliana]
           gi|3337365|gb|AAC27410.1| expressed protein [Arabidopsis
           thaliana] gi|21555794|gb|AAM63935.1| unknown
           [Arabidopsis thaliana] gi|26451952|dbj|BAC43068.1|
           unknown protein [Arabidopsis thaliana]
           gi|28416871|gb|AAO42966.1| At2g34340 [Arabidopsis
           thaliana] gi|330253866|gb|AEC08960.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 136

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 40/91 (43%), Positives = 58/91 (63%), Gaps = 5/91 (5%)
 Frame = -1

Query: 259 DRATLKSEANKRKKTCKNTISS-VPMNIPDDKKHWFNKYV---DMEVSDEDYC-GGTNFA 95
           D    K+   KR  T K ++SS +P++IP++    F +YV   + E S+E+Y  GG    
Sbjct: 32  DMERKKTRRIKRTTTEKASLSSSLPVSIPENI---FRRYVGKEEDEYSEEEYSEGGGEMI 88

Query: 94  PPHVIIGHRVAGTTIPFSVCTGNGRTLKGRD 2
           PPH++IG R+ G  + FSVC+G+GRTLKGRD
Sbjct: 89  PPHIMIGRRIQGGQMAFSVCSGSGRTLKGRD 119


>ref|XP_002881332.1| hypothetical protein ARALYDRAFT_482377 [Arabidopsis lyrata subsp.
           lyrata] gi|297327171|gb|EFH57591.1| hypothetical protein
           ARALYDRAFT_482377 [Arabidopsis lyrata subsp. lyrata]
          Length = 134

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 35/79 (44%), Positives = 48/79 (60%), Gaps = 3/79 (3%)
 Frame = -1

Query: 229 KRKKTCKNTISSVPMNIPDDKKHWFNKYVDMEVSD---EDYCGGTNFAPPHVIIGHRVAG 59
           K   T K   SS+P+NIP++    F +YV  E  D   E+Y       PPH+++G R+ G
Sbjct: 42  KMTTTDKALSSSLPVNIPENM---FRRYVGKEEDDYSKEEYSDVGEMVPPHIMVGRRIQG 98

Query: 58  TTIPFSVCTGNGRTLKGRD 2
             + FSVC+G+GRTLKGRD
Sbjct: 99  GQMAFSVCSGSGRTLKGRD 117


>gb|AFN53716.1| putative DUF584 protein [Linum usitatissimum]
          Length = 114

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 38/75 (50%), Positives = 45/75 (60%)
 Frame = -1

Query: 226 RKKTCKNTISSVPMNIPDDKKHWFNKYVDMEVSDEDYCGGTNFAPPHVIIGHRVAGTTIP 47
           R K  +   SSVP+NIP +    F        S+E+Y       PPHVI+G RVAG  + 
Sbjct: 30  RSKKKRKQKSSVPVNIPRNNVFRFGD------SEEEYEDSDELVPPHVILGRRVAGK-MA 82

Query: 46  FSVCTGNGRTLKGRD 2
           FSVCTGNGRTLKGRD
Sbjct: 83  FSVCTGNGRTLKGRD 97


>ref|NP_174257.1| uncharacterized protein [Arabidopsis thaliana]
           gi|12323541|gb|AAG51753.1|AC068667_32 hypothetical
           protein; 98808-98386 [Arabidopsis thaliana]
           gi|28466825|gb|AAO44021.1| At1g29640 [Arabidopsis
           thaliana] gi|110743019|dbj|BAE99402.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332192993|gb|AEE31114.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 140

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 35/67 (52%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
 Frame = -1

Query: 199 SSVPMNIPDDKKHWFNKY-VDMEVSDEDYCGGTNFAPPHVIIGHRVAGTTIPFSVCTGNG 23
           SS+P+NIP        +Y  + E SD+D  GG    PPH+I+G R+ G  + FSVCTGNG
Sbjct: 65  SSLPVNIP------MRRYSTEEEYSDDD--GGRKMIPPHLIVGRRMEGGQMAFSVCTGNG 116

Query: 22  RTLKGRD 2
           RTLKGRD
Sbjct: 117 RTLKGRD 123


Top