BLASTX nr result

ID: Lithospermum22_contig00033741 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00033741
         (219 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511863.1| CRP, putative [Ricinus communis] gi|22354904...   115   4e-24
ref|XP_002274479.2| PREDICTED: uncharacterized protein LOC100263...   109   3e-22
emb|CBI40380.3| unnamed protein product [Vitis vinifera]              109   3e-22
sp|H3K2Y6.1|MED12_ARATH RecName: Full=Mediator of RNA polymerase...   102   3e-20
ref|XP_003552395.1| PREDICTED: uncharacterized protein LOC100806...   100   9e-20

>ref|XP_002511863.1| CRP, putative [Ricinus communis] gi|223549043|gb|EEF50532.1| CRP,
           putative [Ricinus communis]
          Length = 2264

 Score =  115 bits (288), Expect = 4e-24
 Identities = 55/72 (76%), Positives = 61/72 (84%)
 Frame = +3

Query: 3   ATWFIKVTYLNQVRPGSSSISSGLPDKTQFSRSEQWTKDLIEYLQNLLDEFASRNYTHST 182
           ATWFIKVTYLNQVRP S+SISSG PDKTQ SR+E WTKD+IEYLQ LLDEF SRN +HS 
Sbjct: 215 ATWFIKVTYLNQVRPSSASISSGTPDKTQLSRTELWTKDVIEYLQILLDEFFSRNNSHSA 274

Query: 183 VHISDRSSQMIY 218
           +H  DRS QM+Y
Sbjct: 275 LHTRDRSPQMLY 286


>ref|XP_002274479.2| PREDICTED: uncharacterized protein LOC100263628 [Vitis vinifera]
          Length = 2272

 Score =  109 bits (272), Expect = 3e-22
 Identities = 51/72 (70%), Positives = 60/72 (83%)
 Frame = +3

Query: 3   ATWFIKVTYLNQVRPGSSSISSGLPDKTQFSRSEQWTKDLIEYLQNLLDEFASRNYTHST 182
           ATWFIKVTYLNQVRP S+SISSG PDK Q SR+E WTKD+I+YLQ LL+EF SRN +HST
Sbjct: 214 ATWFIKVTYLNQVRPASASISSGSPDKIQLSRTELWTKDVIDYLQGLLEEFFSRNNSHST 273

Query: 183 VHISDRSSQMIY 218
            H  D+S Q++Y
Sbjct: 274 QHSRDKSQQILY 285


>emb|CBI40380.3| unnamed protein product [Vitis vinifera]
          Length = 2037

 Score =  109 bits (272), Expect = 3e-22
 Identities = 51/72 (70%), Positives = 60/72 (83%)
 Frame = +3

Query: 3   ATWFIKVTYLNQVRPGSSSISSGLPDKTQFSRSEQWTKDLIEYLQNLLDEFASRNYTHST 182
           ATWFIKVTYLNQVRP S+SISSG PDK Q SR+E WTKD+I+YLQ LL+EF SRN +HST
Sbjct: 214 ATWFIKVTYLNQVRPASASISSGSPDKIQLSRTELWTKDVIDYLQGLLEEFFSRNNSHST 273

Query: 183 VHISDRSSQMIY 218
            H  D+S Q++Y
Sbjct: 274 QHSRDKSQQILY 285


>sp|H3K2Y6.1|MED12_ARATH RecName: Full=Mediator of RNA polymerase II transcription subunit
           12; AltName: Full=Protein CENTER CITY; AltName:
           Full=Protein CRYPTIC PRECOCIOUS
           gi|374428817|dbj|BAL49816.1| cryptic precocious
           [Arabidopsis thaliana] gi|374428819|dbj|BAL49817.1|
           cryptic precocious splicing variant [Arabidopsis
           thaliana] gi|374428821|dbj|BAL49818.1| cryptic
           precocious [Arabidopsis thaliana]
          Length = 2235

 Score =  102 bits (254), Expect = 3e-20
 Identities = 50/72 (69%), Positives = 55/72 (76%)
 Frame = +3

Query: 3   ATWFIKVTYLNQVRPGSSSISSGLPDKTQFSRSEQWTKDLIEYLQNLLDEFASRNYTHST 182
           ATWFIKVTYLNQVRP  ++ISSG PDKTQ SR EQWTKD+IEYLQ LLDE  SRN +   
Sbjct: 211 ATWFIKVTYLNQVRPSPAAISSGTPDKTQASRCEQWTKDVIEYLQYLLDELLSRNSSFPA 270

Query: 183 VHISDRSSQMIY 218
               DRS QM+Y
Sbjct: 271 QQTRDRSPQMLY 282


>ref|XP_003552395.1| PREDICTED: uncharacterized protein LOC100806985 [Glycine max]
          Length = 2279

 Score =  100 bits (250), Expect = 9e-20
 Identities = 50/72 (69%), Positives = 56/72 (77%)
 Frame = +3

Query: 3   ATWFIKVTYLNQVRPGSSSISSGLPDKTQFSRSEQWTKDLIEYLQNLLDEFASRNYTHST 182
           ATWFIKV+YLN VRPGS+SI SG  DKTQ S SE WTKD+IEYLQ LLDEF S+N +H T
Sbjct: 213 ATWFIKVSYLNVVRPGSASIPSGTADKTQLSCSELWTKDVIEYLQTLLDEFFSKNSSHFT 272

Query: 183 VHISDRSSQMIY 218
            H  DRS Q+ Y
Sbjct: 273 PHNRDRSPQVPY 284


Top