BLASTX nr result

ID: Lithospermum22_contig00033729 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00033729
         (480 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520315.1| F-box and wd40 domain protein, putative [Ric...    99   4e-19
gb|AAD41418.1|AC007727_7 Contains PF|00097 Zinc finger C3HC4 typ...    97   1e-18
ref|XP_002284600.2| PREDICTED: uncharacterized protein LOC100248...    97   1e-18
ref|NP_001185058.1| preprotein translocase secA-like protein [Ar...    97   1e-18
ref|NP_001117325.1| zinc ion binding protein [Arabidopsis thalia...    97   1e-18

>ref|XP_002520315.1| F-box and wd40 domain protein, putative [Ricinus communis]
           gi|223540534|gb|EEF42101.1| F-box and wd40 domain
           protein, putative [Ricinus communis]
          Length = 1794

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 55/112 (49%), Positives = 63/112 (56%), Gaps = 1/112 (0%)
 Frame = +3

Query: 144 VCLTPYSTTSTIPRVIPCGHTTCEGCLLLLPHPLPNTIRCPSCTQLVNFPN-HPSSLPKN 320
           VCL  Y     IPRV+ CGHTTCE CL  LP   P TIRCP+C QLV FP+  PSSLPKN
Sbjct: 8   VCLQNYDGEYAIPRVLTCGHTTCESCLKSLPQKYPQTIRCPACVQLVKFPSLGPSSLPKN 67

Query: 321 IDLLHFCQQTKVPKKLILQNVHNFDFCYSGDGVCLISNLWSPEFYRNWVRWV 476
           IDLL     T   KK  + +  + D       V   S LWS +F+  W  WV
Sbjct: 68  IDLLRLI-PTNHKKKQPINHSRSSD-----HQVDSASFLWSDDFFVTWKNWV 113


>gb|AAD41418.1|AC007727_7 Contains PF|00097 Zinc finger C3HC4 type and 4 WD40 PF|00400 (G
           beta) domains [Arabidopsis thaliana]
          Length = 860

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 52/108 (48%), Positives = 62/108 (57%), Gaps = 1/108 (0%)
 Frame = +3

Query: 144 VCLTPYSTTSTIPRVIPCGHTTCEGCLLLLPHPLPNTIRCPSCTQLVNF-PNHPSSLPKN 320
           VCL  Y   ST+PRV+ CGHT CE CL  LP   P+TIRCP+CT LV F P  PS+LPKN
Sbjct: 8   VCLQSYDGESTVPRVLACGHTACEECLTNLPKKFPDTIRCPACTVLVKFPPQGPSALPKN 67

Query: 321 IDLLHFCQQTKVPKKLILQNVHNFDFCYSGDGVCLISNLWSPEFYRNW 464
           IDLL          KL L+   NF+       V  ++  WS +FY  W
Sbjct: 68  IDLLRLFPSI---SKLKLEPGRNFE-----KVVEFVTRSWSDDFYATW 107


>ref|XP_002284600.2| PREDICTED: uncharacterized protein LOC100248990 [Vitis vinifera]
          Length = 1817

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 51/117 (43%), Positives = 64/117 (54%), Gaps = 6/117 (5%)
 Frame = +3

Query: 144 VCLTPYSTTSTIPRVIPCGHTTCEGCLLLLPHPLPNTIRCPSCTQLVNFPN--HPSSLPK 317
           VCL  Y T   IPRV+ CGHT CE C+  LP    +TIRCP+CTQLV F +   PS+LPK
Sbjct: 10  VCLQTYDTDQAIPRVLACGHTACEACITHLPQRFLDTIRCPACTQLVKFSHLQGPSALPK 69

Query: 318 NIDLLHFC----QQTKVPKKLILQNVHNFDFCYSGDGVCLISNLWSPEFYRNWVRWV 476
           NIDLL  C       + P+K  + + + F           +  LWS +FY  W  WV
Sbjct: 70  NIDLLRLCLSEDSDYQKPQKRPITSHYEF-----------LPRLWSDQFYSVWKDWV 115


>ref|NP_001185058.1| preprotein translocase secA-like protein [Arabidopsis thaliana]
           gi|332192012|gb|AEE30133.1| preprotein translocase
           secA-like protein [Arabidopsis thaliana]
          Length = 1805

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 52/108 (48%), Positives = 62/108 (57%), Gaps = 1/108 (0%)
 Frame = +3

Query: 144 VCLTPYSTTSTIPRVIPCGHTTCEGCLLLLPHPLPNTIRCPSCTQLVNF-PNHPSSLPKN 320
           VCL  Y   ST+PRV+ CGHT CE CL  LP   P+TIRCP+CT LV F P  PS+LPKN
Sbjct: 8   VCLQSYDGESTVPRVLACGHTACEECLTNLPKKFPDTIRCPACTVLVKFPPQGPSALPKN 67

Query: 321 IDLLHFCQQTKVPKKLILQNVHNFDFCYSGDGVCLISNLWSPEFYRNW 464
           IDLL          KL L+   NF+       V  ++  WS +FY  W
Sbjct: 68  IDLLRLFPSI---SKLKLEPGRNFE-----KVVEFVTRSWSDDFYATW 107


>ref|NP_001117325.1| zinc ion binding protein [Arabidopsis thaliana]
           gi|17529236|gb|AAL38845.1| putative SecA-type
           chloroplast protein transport factor [Arabidopsis
           thaliana] gi|20465933|gb|AAM20152.1| putative SecA-type
           chloroplast transport factor protein [Arabidopsis
           thaliana] gi|110739333|dbj|BAF01579.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332192014|gb|AEE30135.1| zinc ion binding protein
           [Arabidopsis thaliana]
          Length = 811

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 52/108 (48%), Positives = 62/108 (57%), Gaps = 1/108 (0%)
 Frame = +3

Query: 144 VCLTPYSTTSTIPRVIPCGHTTCEGCLLLLPHPLPNTIRCPSCTQLVNF-PNHPSSLPKN 320
           VCL  Y   ST+PRV+ CGHT CE CL  LP   P+TIRCP+CT LV F P  PS+LPKN
Sbjct: 8   VCLQSYDGESTVPRVLACGHTACEECLTNLPKKFPDTIRCPACTVLVKFPPQGPSALPKN 67

Query: 321 IDLLHFCQQTKVPKKLILQNVHNFDFCYSGDGVCLISNLWSPEFYRNW 464
           IDLL          KL L+   NF+       V  ++  WS +FY  W
Sbjct: 68  IDLLRLFPSI---SKLKLEPGRNFE-----KVVEFVTRSWSDDFYATW 107


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