BLASTX nr result
ID: Lithospermum22_contig00033718
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00033718
(663 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABA98491.1| retrotransposon protein, putative, unclassified [... 73 3e-26
gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japo... 70 3e-26
gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza ... 70 3e-26
gb|AAP53315.2| retrotransposon protein, putative, unclassified [... 70 3e-26
emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga... 57 2e-25
>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1621
Score = 73.2 bits (178), Expect(4) = 3e-26
Identities = 43/96 (44%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
Frame = +3
Query: 207 FQPGRGLRQGDLLSPYLFILYTEGLIALLNSARERGNCRA-*IYMGLGRLYHLLFVDDTL 383
F PGRGLRQGD LSPYLF+L EG ALL+ E G I G + HLLF DD+L
Sbjct: 883 FSPGRGLRQGDPLSPYLFLLCAEGFSALLSKTEEEGRLHGIRICQGAPSVSHLLFADDSL 942
Query: 384 LFEAATTS*ARSMVRILN*YELLFVQLVSIQKSAIL 491
+ A A+ + IL YE Q+++ KSA++
Sbjct: 943 ILCRANGGEAQQLQTILQIYEECSGQVINKDKSAVM 978
Score = 38.9 bits (89), Expect(4) = 3e-26
Identities = 16/42 (38%), Positives = 30/42 (71%)
Frame = +2
Query: 515 IFRILGMQKVTSHDKYLGLPSTMGASKKEVFSSIIDRVKRRI 640
+ L MQ+ T++++YLGLP +G S+ ++FS + +R+ +RI
Sbjct: 991 VMAALNMQRETTNERYLGLPVFVGRSRTKIFSYLKERIWQRI 1032
Score = 37.0 bits (84), Expect(4) = 3e-26
Identities = 16/26 (61%), Positives = 21/26 (80%)
Frame = +2
Query: 17 KKSGKEGYMSIKLNMHKAYDRIE*SF 94
K+SG+ GY + KL+M KAYDR+E SF
Sbjct: 819 KRSGQVGYAAFKLDMSKAYDRVEWSF 844
Score = 35.4 bits (80), Expect(4) = 3e-26
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +1
Query: 91 FLKQTMTILGFTNKWINLIILYIESVAYSLIVNGKQ*VTFNP 216
FL + LGF W+NLI+ + +V Y + VNG+ +F+P
Sbjct: 844 FLHDMILKLGFHTDWVNLIMKCVSTVTYRIRVNGELSESFSP 885
>gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group]
Length = 1594
Score = 70.1 bits (170), Expect(4) = 3e-26
Identities = 42/96 (43%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Frame = +3
Query: 207 FQPGRGLRQGDLLSPYLFILYTEGLIALLNSARERGNCRA-*IYMGLGRLYHLLFVDDTL 383
F P RGLRQGD LSPYLF+L EG ALL+ E G I G + HLLF DD+L
Sbjct: 856 FSPERGLRQGDPLSPYLFLLCAEGFSALLSKTEEEGRLHGIRICQGAPSVSHLLFADDSL 915
Query: 384 LFEAATTS*ARSMVRILN*YELLFVQLVSIQKSAIL 491
+ A A+ + IL YE Q+++ KSA++
Sbjct: 916 ILCRANGGEAQQLQTILQIYEECSGQVINKDKSAVM 951
Score = 40.0 bits (92), Expect(4) = 3e-26
Identities = 17/42 (40%), Positives = 30/42 (71%)
Frame = +2
Query: 515 IFRILGMQKVTSHDKYLGLPSTMGASKKEVFSSIIDRVKRRI 640
+ L MQ+ T+++KYLGLP +G S+ ++FS + +R+ +RI
Sbjct: 964 VMAALNMQRETTNEKYLGLPVFVGRSRTKIFSYLKERIWQRI 1005
Score = 37.0 bits (84), Expect(4) = 3e-26
Identities = 16/26 (61%), Positives = 21/26 (80%)
Frame = +2
Query: 17 KKSGKEGYMSIKLNMHKAYDRIE*SF 94
K+SG+ GY + KL+M KAYDR+E SF
Sbjct: 792 KRSGQVGYAAFKLDMSKAYDRVEWSF 817
Score = 37.0 bits (84), Expect(4) = 3e-26
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +1
Query: 91 FLKQTMTILGFTNKWINLIILYIESVAYSLIVNGKQ*VTFNP 216
FL M LGF W+NLI+ + +V Y + VNG+ +F+P
Sbjct: 817 FLHDMMLKLGFHTDWVNLIMKCVSTVTYRIRVNGELSESFSP 858
>gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1509
Score = 70.1 bits (170), Expect(4) = 3e-26
Identities = 42/96 (43%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Frame = +3
Query: 207 FQPGRGLRQGDLLSPYLFILYTEGLIALLNSARERGNCRA-*IYMGLGRLYHLLFVDDTL 383
F P RGLRQGD LSPYLF+L EG ALL+ E G I G + HLLF DD+L
Sbjct: 828 FSPERGLRQGDPLSPYLFLLCAEGFSALLSKTEEEGRLHGIRICQGAPSVSHLLFADDSL 887
Query: 384 LFEAATTS*ARSMVRILN*YELLFVQLVSIQKSAIL 491
+ A A+ + IL YE Q+++ KSA++
Sbjct: 888 ILCRANGGEAQQLQTILQIYEECSGQVINKDKSAVM 923
Score = 40.0 bits (92), Expect(4) = 3e-26
Identities = 17/42 (40%), Positives = 30/42 (71%)
Frame = +2
Query: 515 IFRILGMQKVTSHDKYLGLPSTMGASKKEVFSSIIDRVKRRI 640
+ L MQ+ T+++KYLGLP +G S+ ++FS + +R+ +RI
Sbjct: 936 VMAALNMQRETTNEKYLGLPVFVGRSRTKIFSYLKERIWQRI 977
Score = 37.0 bits (84), Expect(4) = 3e-26
Identities = 16/26 (61%), Positives = 21/26 (80%)
Frame = +2
Query: 17 KKSGKEGYMSIKLNMHKAYDRIE*SF 94
K+SG+ GY + KL+M KAYDR+E SF
Sbjct: 764 KRSGQVGYAAFKLDMSKAYDRVEWSF 789
Score = 37.0 bits (84), Expect(4) = 3e-26
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +1
Query: 91 FLKQTMTILGFTNKWINLIILYIESVAYSLIVNGKQ*VTFNP 216
FL M LGF W+NLI+ + +V Y + VNG+ +F+P
Sbjct: 789 FLHDMMLKLGFHTDWVNLIMKCVSTVTYRIRVNGELSESFSP 830
>gb|AAP53315.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1505
Score = 70.1 bits (170), Expect(4) = 3e-26
Identities = 42/96 (43%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Frame = +3
Query: 207 FQPGRGLRQGDLLSPYLFILYTEGLIALLNSARERGNCRA-*IYMGLGRLYHLLFVDDTL 383
F P RGLRQGD LSPYLF+L EG ALL+ E G I G + HLLF DD+L
Sbjct: 824 FSPERGLRQGDPLSPYLFLLCAEGFSALLSKTEEEGRLHGIRICQGAPSVSHLLFADDSL 883
Query: 384 LFEAATTS*ARSMVRILN*YELLFVQLVSIQKSAIL 491
+ A A+ + IL YE Q+++ KSA++
Sbjct: 884 ILCRANGGEAQQLQTILQIYEECSGQVINKDKSAVM 919
Score = 40.0 bits (92), Expect(4) = 3e-26
Identities = 17/42 (40%), Positives = 30/42 (71%)
Frame = +2
Query: 515 IFRILGMQKVTSHDKYLGLPSTMGASKKEVFSSIIDRVKRRI 640
+ L MQ+ T+++KYLGLP +G S+ ++FS + +R+ +RI
Sbjct: 932 VMAALNMQRETTNEKYLGLPVFVGRSRTKIFSYLKERIWQRI 973
Score = 37.0 bits (84), Expect(4) = 3e-26
Identities = 16/26 (61%), Positives = 21/26 (80%)
Frame = +2
Query: 17 KKSGKEGYMSIKLNMHKAYDRIE*SF 94
K+SG+ GY + KL+M KAYDR+E SF
Sbjct: 760 KRSGQVGYAAFKLDMSKAYDRVEWSF 785
Score = 37.0 bits (84), Expect(4) = 3e-26
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +1
Query: 91 FLKQTMTILGFTNKWINLIILYIESVAYSLIVNGKQ*VTFNP 216
FL M LGF W+NLI+ + +V Y + VNG+ +F+P
Sbjct: 785 FLHDMMLKLGFHTDWVNLIMKCVSTVTYRIRVNGELSESFSP 826
>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1355
Score = 57.0 bits (136), Expect(4) = 2e-25
Identities = 36/97 (37%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Frame = +3
Query: 201 GYFQPGRGLRQGDLLSPYLFILYTEGLIALL-NSARERGNCRA*IYMGLGRLYHLLFVDD 377
G P RGLRQGD LSPYLFI+ + ++ +++ A + HL F DD
Sbjct: 629 GSVVPARGLRQGDPLSPYLFIMVADAFSKMIQRKVQDKQLHGAKASRSGPEISHLFFADD 688
Query: 378 TLLFEAATTS*ARSMVRILN*YELLFVQLVSIQKSAI 488
+LLF A +V ILN YEL Q ++ +KS +
Sbjct: 689 SLLFTRANRQECTIIVDILNQYELASGQKINYEKSEV 725
Score = 53.9 bits (128), Expect(4) = 2e-25
Identities = 25/58 (43%), Positives = 41/58 (70%), Gaps = 2/58 (3%)
Frame = +2
Query: 473 SEISYF--VNGRTREDIFRILGMQKVTSHDKYLGLPSTMGASKKEVFSSIIDRVKRRI 640
SE+SY V+ ++++ IL M++V H+KYLG+PS G SKK +F S+IDR+ +++
Sbjct: 723 SEVSYSRGVSVSQKDELTNILNMRQVDRHEKYLGIPSISGRSKKAIFDSLIDRIWKKL 780
Score = 42.0 bits (97), Expect(4) = 2e-25
Identities = 15/34 (44%), Positives = 25/34 (73%)
Frame = +1
Query: 91 FLKQTMTILGFTNKWINLIILYIESVAYSLIVNG 192
FL++ + +GF +W+NLI+ ++ SV YS I+NG
Sbjct: 592 FLRKLLLTMGFDGRWVNLIMEFVSSVTYSFIING 625
Score = 28.5 bits (62), Expect(4) = 2e-25
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +2
Query: 17 KKSGKEGYMSIKLNMHKAYDRIE*SF 94
+ ++G +++KL+M KAYDR+E F
Sbjct: 567 RNRSRKGTIAMKLDMSKAYDRVEWGF 592