BLASTX nr result

ID: Lithospermum22_contig00033669 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00033669
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81755.1| hypothetical protein VITISV_020922 [Vitis vinifera]    72   4e-11
gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu...    71   1e-10
gb|AAK29467.1| polyprotein-like [Solanum chilense]                     70   1e-10
emb|CAN71533.1| hypothetical protein VITISV_018181 [Vitis vinifera]    70   2e-10
emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera]    69   3e-10

>emb|CAN81755.1| hypothetical protein VITISV_020922 [Vitis vinifera]
          Length = 310

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 41/128 (32%), Positives = 67/128 (52%), Gaps = 7/128 (5%)
 Frame = +3

Query: 3   GHLIKDCLKPKKNQ-------HHVYDNVAVCEDNLGDIFMINNLCDYPSLNNMLSDPLCD 161
           GH+ ++C K KK Q            ++AV   N   I + ++ C        ++    D
Sbjct: 66  GHIKRECRKFKKEQFKGNGEVQKEDKDIAVVASNADTIIVCDDAC--------VNLACQD 117

Query: 162 SDWLVDSGSTFHVTPYKHMFSNYKEIEHGFMCMANSKNCNVIGIGDVCLRFSSDFEFTLK 341
           S W+VD+ ++FH+T  +  FS+Y     G++ M N   C ++G+ DV L+ S  F+  LK
Sbjct: 118 STWVVDTTTSFHITACRDFFSSYTSGSFGWVRMRNEAKCEIVGMRDVELKTSIRFKLVLK 177

Query: 342 NVRHVPEL 365
           +VRHVPE+
Sbjct: 178 DVRHVPEI 185


>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 867

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 42/123 (34%), Positives = 67/123 (54%), Gaps = 2/123 (1%)
 Frame = +3

Query: 3   GHLIKDCLKPKKNQHHVYD-NVAVCEDNL-GDIFMINNLCDYPSLNNMLSDPLCDSDWLV 176
           GH  KDC K +K +  + D NVA C+ ++  DI +I +L          S  L   +W++
Sbjct: 178 GHWKKDCPKLQKKEKVLQDANVAECKSDVESDISLIVSL----------SASLYLDEWIL 227

Query: 177 DSGSTFHVTPYKHMFSNYKEIEHGFMCMANSKNCNVIGIGDVCLRFSSDFEFTLKNVRHV 356
           DSG T+H+ P +  F  ++E++ G + M N   C  +GIG + LR        L++VR+V
Sbjct: 228 DSGCTYHMCPIRDWFFEFQELDGGVVYMGNDNPCKTVGIGSIKLRNHDGSTRILRDVRYV 287

Query: 357 PEL 365
           P+L
Sbjct: 288 PKL 290


>gb|AAK29467.1| polyprotein-like [Solanum chilense]
          Length = 1328

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 37/126 (29%), Positives = 63/126 (50%), Gaps = 5/126 (3%)
 Frame = +3

Query: 3   GHLIKDCLKPKKNQHHVY-----DNVAVCEDNLGDIFMINNLCDYPSLNNMLSDPLCDSD 167
           GH  +DC  PK+ +         DN A    N  D+ ++ N          +     +S+
Sbjct: 240 GHFKRDCPNPKRGKGESSGQKNDDNTAAMVQNNDDVVLLIN-----EEEECMHLAGTESE 294

Query: 168 WLVDSGSTFHVTPYKHMFSNYKEIEHGFMCMANSKNCNVIGIGDVCLRFSSDFEFTLKNV 347
           W+VD+ +++H TP + +F  Y   ++G + M N+    + GIGD+C + +      LK+V
Sbjct: 295 WVVDTAASYHATPVRDLFCRYVAGDYGNVKMGNTSYSKIAGIGDICFKTNVGCTLVLKDV 354

Query: 348 RHVPEL 365
           RHVP+L
Sbjct: 355 RHVPDL 360


>emb|CAN71533.1| hypothetical protein VITISV_018181 [Vitis vinifera]
          Length = 1069

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 36/121 (29%), Positives = 60/121 (49%)
 Frame = +3

Query: 3   GHLIKDCLKPKKNQHHVYDNVAVCEDNLGDIFMINNLCDYPSLNNMLSDPLCDSDWLVDS 182
           GH  + C  PKK     Y NV   E +   +  ++   D               DW++DS
Sbjct: 246 GHFKRQCKSPKKKNKDDYANVVTEEVHDXLLLAVDRPLD---------------DWVLDS 290

Query: 183 GSTFHVTPYKHMFSNYKEIEHGFMCMANSKNCNVIGIGDVCLRFSSDFEFTLKNVRHVPE 362
           G+ FH TP++ +  NY   + G + +AN+   +V+G+GDV +   +   + L+ VRH+P+
Sbjct: 291 GALFHTTPHREIIQNYAAGDFGKVYLANNSTLDVVGLGDVQISLXNGSVWLLEKVRHIPD 350

Query: 363 L 365
           L
Sbjct: 351 L 351


>emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera]
          Length = 777

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 28/67 (41%), Positives = 45/67 (67%)
 Frame = +3

Query: 165 DWLVDSGSTFHVTPYKHMFSNYKEIEHGFMCMANSKNCNVIGIGDVCLRFSSDFEFTLKN 344
           +W++DSG T+H+ P +  FS+Y+E+  G + + N+ +CNV+GIG + +        TLK 
Sbjct: 177 EWVLDSGCTYHMCPRRDWFSSYQEVNGGKLLLGNNMSCNVVGIGTMAINMHDGKTRTLKE 236

Query: 345 VRHVPEL 365
           VRHVP+L
Sbjct: 237 VRHVPDL 243


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