BLASTX nr result

ID: Lithospermum22_contig00033647 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00033647
         (796 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534104.1| PREDICTED: uncharacterized protein LOC100791...    71   2e-10
ref|XP_003620296.1| Fiber expressed protein [Medicago truncatula...    63   6e-08
ref|XP_003620292.1| Cotton fiber expressed protein [Medicago tru...    61   2e-07

>ref|XP_003534104.1| PREDICTED: uncharacterized protein LOC100791218 [Glycine max]
          Length = 135

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 47/118 (39%), Positives = 60/118 (50%)
 Frame = +2

Query: 80  DEDGDNSLAEMWKAITGGAENSGKPELKKSETCPIDATNIGTVQSIDSKGLLPTAAAAWK 259
           D DGD++L   W+AI  G   + KP+LKKS+T                 G     A A K
Sbjct: 17  DSDGDDTLEATWRAIMEGQGKTMKPQLKKSDTWGARIAKAEPFHRNGEGGDDDPVAWAQK 76

Query: 260 ELRKSVTFDDTISMRKRAGLMRDCLMSQESFGKRADDFIHKIKNTMRMERQASIIRSR 433
           EL+KS TF+D      RA L RD  MS E   +RA+ FI KI N M+++R  S  R R
Sbjct: 77  ELKKSDTFND------RASLRRDKSMSPEELNRRAEAFIKKINNQMKLQRLESYQRFR 128


>ref|XP_003620296.1| Fiber expressed protein [Medicago truncatula]
           gi|357500037|ref|XP_003620307.1| Fiber expressed protein
           [Medicago truncatula] gi|355495311|gb|AES76514.1| Fiber
           expressed protein [Medicago truncatula]
           gi|355495322|gb|AES76525.1| Fiber expressed protein
           [Medicago truncatula]
          Length = 331

 Score = 63.2 bits (152), Expect = 6e-08
 Identities = 45/122 (36%), Positives = 60/122 (49%), Gaps = 4/122 (3%)
 Frame = +2

Query: 74  ANDEDGDNSLAEMWKAITGGAENSGKPELKKSETCPIDATNIGTVQSIDSKGL----LPT 241
           + D+  D+SL   WKAI  G E + KP LKKS+T           ++    G        
Sbjct: 207 SGDKGDDDSLEATWKAIMEGQEKTKKPYLKKSDTWTARIVKAEPFRNNGGCGFGSGDDDP 266

Query: 242 AAAAWKELRKSVTFDDTISMRKRAGLMRDCLMSQESFGKRADDFIHKIKNTMRMERQASI 421
            A A +EL+KS TF+D      RA L R+  MS E   KRA+ FI K  N M+++R  S 
Sbjct: 267 VAWAERELKKSETFND------RASLKREKSMSPEELNKRAEAFIKKFNNQMKLQRLESY 320

Query: 422 IR 427
            R
Sbjct: 321 QR 322


>ref|XP_003620292.1| Cotton fiber expressed protein [Medicago truncatula]
           gi|357500045|ref|XP_003620311.1| Cotton fiber expressed
           protein [Medicago truncatula]
           gi|355495307|gb|AES76510.1| Cotton fiber expressed
           protein [Medicago truncatula]
           gi|355495326|gb|AES76529.1| Cotton fiber expressed
           protein [Medicago truncatula]
          Length = 316

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 45/123 (36%), Positives = 59/123 (47%), Gaps = 5/123 (4%)
 Frame = +2

Query: 74  ANDEDGDNSLAEMWKAITGGAENSGKPELKKSETCPIDATNIGTVQSIDSKGLL-----P 238
           + D+  D+SL   WKAI    E + KP LKKS T       I   +   + G        
Sbjct: 195 SGDKGDDDSLEATWKAIMEAQEKTKKPHLKKSGTW---TARIVKAEPFRNNGGFCGGDDD 251

Query: 239 TAAAAWKELRKSVTFDDTISMRKRAGLMRDCLMSQESFGKRADDFIHKIKNTMRMERQAS 418
             A A +EL+KS TF+D      RA L R+  MS E   KRA+ FI K  N M+++R  S
Sbjct: 252 PVAWAQRELKKSETFND------RASLKREKSMSPEELNKRAEAFIKKFNNQMKLQRMES 305

Query: 419 IIR 427
             R
Sbjct: 306 YHR 308


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