BLASTX nr result
ID: Lithospermum22_contig00033647
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Lithospermum22_contig00033647 (796 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003534104.1| PREDICTED: uncharacterized protein LOC100791... 71 2e-10 ref|XP_003620296.1| Fiber expressed protein [Medicago truncatula... 63 6e-08 ref|XP_003620292.1| Cotton fiber expressed protein [Medicago tru... 61 2e-07 >ref|XP_003534104.1| PREDICTED: uncharacterized protein LOC100791218 [Glycine max] Length = 135 Score = 71.2 bits (173), Expect = 2e-10 Identities = 47/118 (39%), Positives = 60/118 (50%) Frame = +2 Query: 80 DEDGDNSLAEMWKAITGGAENSGKPELKKSETCPIDATNIGTVQSIDSKGLLPTAAAAWK 259 D DGD++L W+AI G + KP+LKKS+T G A A K Sbjct: 17 DSDGDDTLEATWRAIMEGQGKTMKPQLKKSDTWGARIAKAEPFHRNGEGGDDDPVAWAQK 76 Query: 260 ELRKSVTFDDTISMRKRAGLMRDCLMSQESFGKRADDFIHKIKNTMRMERQASIIRSR 433 EL+KS TF+D RA L RD MS E +RA+ FI KI N M+++R S R R Sbjct: 77 ELKKSDTFND------RASLRRDKSMSPEELNRRAEAFIKKINNQMKLQRLESYQRFR 128 >ref|XP_003620296.1| Fiber expressed protein [Medicago truncatula] gi|357500037|ref|XP_003620307.1| Fiber expressed protein [Medicago truncatula] gi|355495311|gb|AES76514.1| Fiber expressed protein [Medicago truncatula] gi|355495322|gb|AES76525.1| Fiber expressed protein [Medicago truncatula] Length = 331 Score = 63.2 bits (152), Expect = 6e-08 Identities = 45/122 (36%), Positives = 60/122 (49%), Gaps = 4/122 (3%) Frame = +2 Query: 74 ANDEDGDNSLAEMWKAITGGAENSGKPELKKSETCPIDATNIGTVQSIDSKGL----LPT 241 + D+ D+SL WKAI G E + KP LKKS+T ++ G Sbjct: 207 SGDKGDDDSLEATWKAIMEGQEKTKKPYLKKSDTWTARIVKAEPFRNNGGCGFGSGDDDP 266 Query: 242 AAAAWKELRKSVTFDDTISMRKRAGLMRDCLMSQESFGKRADDFIHKIKNTMRMERQASI 421 A A +EL+KS TF+D RA L R+ MS E KRA+ FI K N M+++R S Sbjct: 267 VAWAERELKKSETFND------RASLKREKSMSPEELNKRAEAFIKKFNNQMKLQRLESY 320 Query: 422 IR 427 R Sbjct: 321 QR 322 >ref|XP_003620292.1| Cotton fiber expressed protein [Medicago truncatula] gi|357500045|ref|XP_003620311.1| Cotton fiber expressed protein [Medicago truncatula] gi|355495307|gb|AES76510.1| Cotton fiber expressed protein [Medicago truncatula] gi|355495326|gb|AES76529.1| Cotton fiber expressed protein [Medicago truncatula] Length = 316 Score = 61.2 bits (147), Expect = 2e-07 Identities = 45/123 (36%), Positives = 59/123 (47%), Gaps = 5/123 (4%) Frame = +2 Query: 74 ANDEDGDNSLAEMWKAITGGAENSGKPELKKSETCPIDATNIGTVQSIDSKGLL-----P 238 + D+ D+SL WKAI E + KP LKKS T I + + G Sbjct: 195 SGDKGDDDSLEATWKAIMEAQEKTKKPHLKKSGTW---TARIVKAEPFRNNGGFCGGDDD 251 Query: 239 TAAAAWKELRKSVTFDDTISMRKRAGLMRDCLMSQESFGKRADDFIHKIKNTMRMERQAS 418 A A +EL+KS TF+D RA L R+ MS E KRA+ FI K N M+++R S Sbjct: 252 PVAWAQRELKKSETFND------RASLKREKSMSPEELNKRAEAFIKKFNNQMKLQRMES 305 Query: 419 IIR 427 R Sbjct: 306 YHR 308