BLASTX nr result

ID: Lithospermum22_contig00033636 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00033636
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512343.1| ring finger protein, putative [Ricinus commu...    98   6e-19
dbj|BAJ85025.1| predicted protein [Hordeum vulgare subsp. vulgare]     94   1e-17
gb|AAO45753.1| RING/c3HC4/PHD zinc finger-like protein [Cucumis ...    93   2e-17
ref|XP_002882402.1| hypothetical protein ARALYDRAFT_477807 [Arab...    93   3e-17
ref|XP_002874373.1| zinc finger family protein [Arabidopsis lyra...    92   6e-17

>ref|XP_002512343.1| ring finger protein, putative [Ricinus communis]
           gi|223548304|gb|EEF49795.1| ring finger protein,
           putative [Ricinus communis]
          Length = 380

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 55/103 (53%), Positives = 67/103 (65%), Gaps = 5/103 (4%)
 Frame = -2

Query: 295 APPPP----DNFYTARFSPSMXXXXXXXXXXLFFMGFFSIYIRHCSQNPTGQSIRQTISM 128
           A P P    D +  AR +PSM          LFFMGFFS+YIRHC+ +  G S++   + 
Sbjct: 24  AQPSPAEARDPYGYARVTPSMAIIIVVLIAALFFMGFFSVYIRHCANSSNGVSVQGLANG 83

Query: 127 -RRRGAAAVRGLEASVIETFPTFSYAEVKDQRIGKGALECAVC 2
            R R AAA RGL+A+VIETFPT  Y+EVK  +IGKGALECAVC
Sbjct: 84  GRSRRAAAARGLDAAVIETFPTLVYSEVKGLKIGKGALECAVC 126


>dbj|BAJ85025.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 397

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 47/102 (46%), Positives = 61/102 (59%), Gaps = 1/102 (0%)
 Frame = -2

Query: 304 QQAAPPPPDNFYTARFSPSMXXXXXXXXXXLFFMGFFSIYIRHCSQNPTGQSIRQTI-SM 128
           QQ  PPP   +YT  FSPSM           FF+GFFS+Y+RHC  + T  +    I + 
Sbjct: 38  QQNPPPPGGQYYTTNFSPSMAIVIVVLIAAFFFLGFFSVYVRHCYGDNTYAATTLPIGAA 97

Query: 127 RRRGAAAVRGLEASVIETFPTFSYAEVKDQRIGKGALECAVC 2
             R     RGL+ +V+ETFPT +YA+VK+ +  KGALECAVC
Sbjct: 98  AARSRRQQRGLDPAVLETFPTMAYADVKEHKAVKGALECAVC 139


>gb|AAO45753.1| RING/c3HC4/PHD zinc finger-like protein [Cucumis melo subsp. melo]
          Length = 379

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 48/100 (48%), Positives = 62/100 (62%)
 Frame = -2

Query: 301 QAAPPPPDNFYTARFSPSMXXXXXXXXXXLFFMGFFSIYIRHCSQNPTGQSIRQTISMRR 122
           Q AP P  + Y  R S SM          LFFM FFS+YIRHC+ +P+  ++R   +   
Sbjct: 29  QPAPDPRSDPYQYRLSGSMAVIIVILIAALFFMAFFSVYIRHCNDSPSN-TVRPITAAAG 87

Query: 121 RGAAAVRGLEASVIETFPTFSYAEVKDQRIGKGALECAVC 2
           R   A RGL+ +VIETFPT  Y++VK+ +IGK ALECAVC
Sbjct: 88  RSRRATRGLDPAVIETFPTLIYSDVKEHKIGKSALECAVC 127


>ref|XP_002882402.1| hypothetical protein ARALYDRAFT_477807 [Arabidopsis lyrata subsp.
           lyrata] gi|297328242|gb|EFH58661.1| hypothetical protein
           ARALYDRAFT_477807 [Arabidopsis lyrata subsp. lyrata]
          Length = 398

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 52/102 (50%), Positives = 62/102 (60%), Gaps = 2/102 (1%)
 Frame = -2

Query: 301 QAAPPPPDNFYT-ARFSPSMXXXXXXXXXXLFFMGFFSIYIRHCSQNP-TGQSIRQTISM 128
           Q+ P P +  Y   R SP+M          LFFMGFFSIY RHCS  P  G S       
Sbjct: 30  QSQPGPANQPYNYGRLSPAMAVIVVILIAALFFMGFFSIYFRHCSGVPDAGVSPAGGARS 89

Query: 127 RRRGAAAVRGLEASVIETFPTFSYAEVKDQRIGKGALECAVC 2
           R    AA RGL+ASV+ETFPTF Y++VK Q++GKG LECA+C
Sbjct: 90  RATVNAAARGLDASVVETFPTFLYSDVKTQKLGKGELECAIC 131


>ref|XP_002874373.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297320210|gb|EFH50632.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 370

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 50/99 (50%), Positives = 62/99 (62%), Gaps = 3/99 (3%)
 Frame = -2

Query: 289 PPPDNF-YTARFSPSMXXXXXXXXXXLFFMGFFSIYIRHCSQNPTGQSIRQTISMRRR-- 119
           P  D + Y+   SP+M          LFFMGFF++YIRHC+    G ++  T   RRR  
Sbjct: 30  PRSDQYAYSGSLSPAMAVVVVVVIAALFFMGFFTVYIRHCTGAVDG-NVTPTGGARRRVT 88

Query: 118 GAAAVRGLEASVIETFPTFSYAEVKDQRIGKGALECAVC 2
            A   RGL+A  IETFPTF Y+EVK Q+IGKGALECA+C
Sbjct: 89  NATVARGLDAETIETFPTFVYSEVKTQKIGKGALECAIC 127


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