BLASTX nr result

ID: Lithospermum22_contig00033626 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00033626
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containi...   119   3e-25
emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]   119   3e-25
ref|XP_002311156.1| predicted protein [Populus trichocarpa] gi|2...   118   6e-25
ref|XP_002528456.1| pentatricopeptide repeat-containing protein,...   100   2e-19
ref|XP_003551820.1| PREDICTED: pentatricopeptide repeat-containi...    92   4e-17

>ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g39620-like [Vitis vinifera]
          Length = 1005

 Score =  119 bits (298), Expect = 3e-25
 Identities = 54/88 (61%), Positives = 69/88 (78%)
 Frame = -1

Query: 264 AKCNDFHSALTVFNVMPSKDVVTWNALINGYAQIGDGFKVMEVYHKLILSGLHPDPGTMV 85
           AKC  F +ALT FN M S+D+VTWN+LINGYAQIGD +  +++++KL LS ++PD GTMV
Sbjct: 476 AKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMV 535

Query: 84  GVLPACAILGDRHNGTCIHCQIIKYGFE 1
           GV+PACA+L D   GTCIH  I+K GFE
Sbjct: 536 GVVPACALLNDLDQGTCIHGLIVKLGFE 563



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 35/88 (39%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
 Frame = -1

Query: 264 AKCNDFHSALTVFNVMP-SKDVVTWNALINGYAQIGDGFKVMEVYHKLILSGLHPDPGTM 88
           AKC    SA  +FN    +KD VTWN +I  Y Q G   + +  +H++ L   HP+  T 
Sbjct: 577 AKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTF 636

Query: 87  VGVLPACAILGDRHNGTCIHCQIIKYGF 4
           V VLPA A L     G   H  II+ GF
Sbjct: 637 VSVLPAAAYLAAFREGMAFHACIIQMGF 664


>emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
          Length = 1005

 Score =  119 bits (298), Expect = 3e-25
 Identities = 54/88 (61%), Positives = 69/88 (78%)
 Frame = -1

Query: 264 AKCNDFHSALTVFNVMPSKDVVTWNALINGYAQIGDGFKVMEVYHKLILSGLHPDPGTMV 85
           AKC  F +ALT FN M S+D+VTWN+LINGYAQIGD +  +++++KL LS ++PD GTMV
Sbjct: 476 AKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMV 535

Query: 84  GVLPACAILGDRHNGTCIHCQIIKYGFE 1
           GV+PACA+L D   GTCIH  I+K GFE
Sbjct: 536 GVVPACALLNDLDQGTCIHGLIVKLGFE 563



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 35/88 (39%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
 Frame = -1

Query: 264 AKCNDFHSALTVFNVMP-SKDVVTWNALINGYAQIGDGFKVMEVYHKLILSGLHPDPGTM 88
           AKC    SA  +FN    +KD VTWN +I  Y Q G   + +  +H++ L   HP+  T 
Sbjct: 577 AKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTF 636

Query: 87  VGVLPACAILGDRHNGTCIHCQIIKYGF 4
           V VLPA A L     G   H  II+ GF
Sbjct: 637 VSVLPAAAYLAAFREGMAFHACIIQMGF 664


>ref|XP_002311156.1| predicted protein [Populus trichocarpa] gi|222850976|gb|EEE88523.1|
           predicted protein [Populus trichocarpa]
          Length = 535

 Score =  118 bits (295), Expect = 6e-25
 Identities = 57/88 (64%), Positives = 69/88 (78%)
 Frame = -1

Query: 264 AKCNDFHSALTVFNVMPSKDVVTWNALINGYAQIGDGFKVMEVYHKLILSGLHPDPGTMV 85
           AKC  F  ALT+FN MP KDVVTWNA+INGYAQIG+ F  +E++HKL LS L+P+ GTMV
Sbjct: 135 AKCGFFALALTLFNRMPCKDVVTWNAMINGYAQIGEPFPALEMFHKLQLSELNPNSGTMV 194

Query: 84  GVLPACAILGDRHNGTCIHCQIIKYGFE 1
           G+LPA A+L D   G+CIH +IIK GFE
Sbjct: 195 GLLPAFALLNDLDQGSCIHGKIIKCGFE 222


>ref|XP_002528456.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532132|gb|EEF33939.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 664

 Score =  100 bits (248), Expect = 2e-19
 Identities = 49/88 (55%), Positives = 63/88 (71%)
 Frame = -1

Query: 264 AKCNDFHSALTVFNVMPSKDVVTWNALINGYAQIGDGFKVMEVYHKLILSGLHPDPGTMV 85
           AKC  F+SALTVFN MP +D+VT NALIN Y+QIGD +  MEV+H + +S + PD  TMV
Sbjct: 361 AKCGLFNSALTVFNRMPCEDIVTCNALINEYSQIGDPYHAMEVFHVVQISEILPDSRTMV 420

Query: 84  GVLPACAILGDRHNGTCIHCQIIKYGFE 1
            +L  C +L D   G+CIH  IIK+GF+
Sbjct: 421 CLLSVCILLHDLEQGSCIHGLIIKFGFD 448


>ref|XP_003551820.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g39620-like [Glycine max]
          Length = 887

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 44/87 (50%), Positives = 57/87 (65%)
 Frame = -1

Query: 261 KCNDFHSALTVFNVMPSKDVVTWNALINGYAQIGDGFKVMEVYHKLILSGLHPDPGTMVG 82
           +C  F  A+T+FN M  KDVV WN LING+ + GD    +E++ +L LSG+ PD GTMV 
Sbjct: 476 RCKSFMYAMTLFNRMHYKDVVAWNTLINGFTKCGDPRLALEMFLRLQLSGVQPDSGTMVS 535

Query: 81  VLPACAILGDRHNGTCIHCQIIKYGFE 1
           +L ACA+L D + G C H  IIK G E
Sbjct: 536 LLSACALLDDLYLGICFHGNIIKNGIE 562


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