BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00033607
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510888.1| pentatricopeptide repeat-containing protein,...   138   5e-31
ref|XP_003533355.1| PREDICTED: pentatricopeptide repeat-containi...   130   1e-28
ref|XP_003622275.1| Pentatricopeptide repeat protein [Medicago t...   124   1e-26
ref|XP_002523091.1| magnesium/proton exchanger, putative [Ricinu...   105   3e-21
emb|CBI39619.3| unnamed protein product [Vitis vinifera]              104   7e-21

>ref|XP_002510888.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550003|gb|EEF51490.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 554

 Score =  138 bits (347), Expect = 5e-31
 Identities = 68/128 (53%), Positives = 91/128 (71%), Gaps = 1/128 (0%)
 Frame = -3

Query: 382 SLFLYKRMRYQNITPDSITINFLLKDCVKRTHNISGELIHSHVVKFGLCRDVYVQNGLIR 203
           +L LYK+M   +I+PD +T  FLLK+C +      G  IH H +K GL  D++VQN LI 
Sbjct: 92  ALILYKQMLCNDISPDCLTFPFLLKECTRNVAIYGGRGIHGHAIKLGLYSDLFVQNSLIS 151

Query: 202 FYAECGGIFYALKLFDDMPNRDIVSCNTIIIGCLREGEVDLALDLFMKME-EKNVITWNS 26
           FY+ C  +  + KLFD+M NRD+VS N++IIG LR G++D +L+LF KM+  +NVITWNS
Sbjct: 152 FYSACEFVSNSRKLFDEMSNRDVVSWNSMIIGYLRSGDLDQSLNLFRKMKINRNVITWNS 211

Query: 25  IITGFVQG 2
           IITGFVQG
Sbjct: 212 IITGFVQG 219


>ref|XP_003533355.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Glycine max]
          Length = 540

 Score =  130 bits (327), Expect = 1e-28
 Identities = 62/127 (48%), Positives = 87/127 (68%)
 Frame = -3

Query: 382 SLFLYKRMRYQNITPDSITINFLLKDCVKRTHNISGELIHSHVVKFGLCRDVYVQNGLIR 203
           +L LYK+M  ++I P+ +T  FLLK C +     +G+ IH+ V+KFG  +DVYV N LI 
Sbjct: 110 ALMLYKQMFCKDIVPNCLTFPFLLKGCTQWLDGATGQAIHTQVIKFGFLKDVYVANSLIS 169

Query: 202 FYAECGGIFYALKLFDDMPNRDIVSCNTIIIGCLREGEVDLALDLFMKMEEKNVITWNSI 23
            Y   G +  A K+FD+M   D+V+ N+++IGCLR G +D+A+DLF KM  +N+ITWNSI
Sbjct: 170 LYMAGGLLSNARKVFDEMLVTDVVTWNSMVIGCLRNGGLDMAMDLFRKMNGRNIITWNSI 229

Query: 22  ITGFVQG 2
           ITG  QG
Sbjct: 230 ITGLAQG 236


>ref|XP_003622275.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355497290|gb|AES78493.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 541

 Score =  124 bits (310), Expect = 1e-26
 Identities = 62/129 (48%), Positives = 90/129 (69%), Gaps = 1/129 (0%)
 Frame = -3

Query: 388 FHSLFLYKRMRYQNITPDSITINFLLKDCVKRTHNIS-GELIHSHVVKFGLCRDVYVQNG 212
           + +L LYK+M  + I P+++T  FL+K C +  +  + GE+IH+HV+KFG   DV+V N 
Sbjct: 110 YKALMLYKQMLNKGIVPNNLTFPFLVKGCSRLQYGGTVGEVIHAHVLKFGFLNDVFVGNS 169

Query: 211 LIRFYAECGGIFYALKLFDDMPNRDIVSCNTIIIGCLREGEVDLALDLFMKMEEKNVITW 32
           LI  +   G    A K+FD+M  RD+VS N++++G LR GEV++AL+LF KM  +N+ITW
Sbjct: 170 LISLFMNFGLSKNARKVFDEMFVRDVVSWNSMVVGYLRNGEVEMALNLFRKMNGRNIITW 229

Query: 31  NSIITGFVQ 5
           NSIITG VQ
Sbjct: 230 NSIITGLVQ 238



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 33/118 (27%), Positives = 60/118 (50%), Gaps = 4/118 (3%)
 Frame = -3

Query: 382 SLFLYKRMRYQN----ITPDSITINFLLKDCVKRTHNISGELIHSHVVKFGLCRDVYVQN 215
           SL ++  M++ +    + PD ITI  +L  C        G+ +H+++ K  +  DV +  
Sbjct: 245 SLEIFHEMQFLSGDDVVKPDKITIASVLSACALLGSIDHGKWVHAYLRKNDIECDVVIGT 304

Query: 214 GLIRFYAECGGIFYALKLFDDMPNRDIVSCNTIIIGCLREGEVDLALDLFMKMEEKNV 41
            L+  Y +CG +  A+++F+DMP +D  +   +I      G    A D F++ME+  V
Sbjct: 305 ALVNMYGKCGDVQQAIEIFNDMPEKDASAWTAMISVFALHGFGKKAFDCFLEMEKAGV 362


>ref|XP_002523091.1| magnesium/proton exchanger, putative [Ricinus communis]
           gi|223537653|gb|EEF39276.1| magnesium/proton exchanger,
           putative [Ricinus communis]
          Length = 1015

 Score =  105 bits (263), Expect = 3e-21
 Identities = 52/123 (42%), Positives = 76/123 (61%)
 Frame = -3

Query: 373 LYKRMRYQNITPDSITINFLLKDCVKRTHNISGELIHSHVVKFGLCRDVYVQNGLIRFYA 194
           +Y RMRY  + PD  T  FLL+    + H +SG+ IH+ +  FGL  D +VQ  LI  Y+
Sbjct: 68  VYLRMRYHGVKPDFHTFPFLLQSFHSQPHLVSGKQIHTQIHHFGLVHDSFVQTSLINMYS 127

Query: 193 ECGGIFYALKLFDDMPNRDIVSCNTIIIGCLREGEVDLALDLFMKMEEKNVITWNSIITG 14
            CG   +A ++FD++   D+ S N+II   ++ G VD+A  LF  M E+NVITW+ +I G
Sbjct: 128 SCGNFSFARQIFDEIAQPDLPSWNSIINASVKVGLVDVARGLFDVMPERNVITWSCMING 187

Query: 13  FVQ 5
           FV+
Sbjct: 188 FVK 190


>emb|CBI39619.3| unnamed protein product [Vitis vinifera]
          Length = 640

 Score =  104 bits (260), Expect = 7e-21
 Identities = 53/136 (38%), Positives = 86/136 (63%), Gaps = 3/136 (2%)
 Frame = -3

Query: 403 QNHISFHSLFLYKRMRYQNITPDSITINFLLKDCVKRTHNISGELIHSHVVKFGLCRDVY 224
           Q++ +  +L LYK M   N+ PD+ T   +++ C  R     G+ IH HV+K G   DVY
Sbjct: 106 QSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFGGKEIHDHVLKVGFDSDVY 165

Query: 223 VQNGLIRFYAECGGIFYALKLFDDMPNRDIVSCNTIIIGCLREGEVDLALD---LFMKME 53
           VQN LI  YA CG +  A KLFD+ P  D VS N+I+ G +++G++   ++   LF +M+
Sbjct: 166 VQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDMGQVMEAWKLFNEMD 225

Query: 52  EKNVITWNSIITGFVQ 5
           EK++++W+++I+G+ Q
Sbjct: 226 EKDMVSWSALISGYEQ 241



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 37/126 (29%), Positives = 67/126 (53%), Gaps = 4/126 (3%)
 Frame = -3

Query: 403 QNHISFHSLFLYKRMRYQNITPDSITINFLLKDCVKRTHNISGELIHSHVVKFGLCRDVY 224
           QN +   +L ++  M    +  D + +  +L  C   +   +G++IH  V++ G+   V 
Sbjct: 241 QNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVN 300

Query: 223 VQNGLIRFYAE----CGGIFYALKLFDDMPNRDIVSCNTIIIGCLREGEVDLALDLFMKM 56
           +QN LI  Y++    CG +  AL++F+ M  + + S N +IIG    G V+ +LD+F +M
Sbjct: 301 LQNALIHMYSDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEM 360

Query: 55  EEKNVI 38
           +   VI
Sbjct: 361 KNNGVI 366