BLASTX nr result

ID: Lithospermum22_contig00033524 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00033524
         (800 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269430.1| PREDICTED: zinc finger CCCH domain-containin...   116   5e-24
emb|CAN68018.1| hypothetical protein VITISV_014472 [Vitis vinifera]   116   5e-24
ref|XP_003544707.1| PREDICTED: zinc finger CCCH domain-containin...   113   6e-23
ref|XP_003519610.1| PREDICTED: zinc finger CCCH domain-containin...   108   2e-21
ref|XP_002277632.2| PREDICTED: zinc finger CCCH domain-containin...   107   2e-21

>ref|XP_002269430.1| PREDICTED: zinc finger CCCH domain-containing protein 29-like
           [Vitis vinifera]
          Length = 689

 Score =  116 bits (291), Expect = 5e-24
 Identities = 67/135 (49%), Positives = 87/135 (64%), Gaps = 3/135 (2%)
 Frame = -1

Query: 800 AVMNSRSPAFANRSQSFVDRAPVNHH-PGFGSGANSPTLRXXXXXXXXXSPNGRLEWGYS 624
           AVMNSRS AFA RSQSF+DR  ++H  PGF + +NS TL           P+G+L+WG  
Sbjct: 546 AVMNSRSSAFAKRSQSFIDRGGMSHRSPGFTAASNSATLMSSNLSDWSS-PDGKLDWGIQ 604

Query: 623 GGEGQELQKSASFGYQNGNVASTKNSGAPPSGHEPDVSWVHSLVKDVSSTDAAGLYNSQQ 444
           G E  +L+KSASFG++  N A T       S  EPDVSWV+SLVKDV +  ++GL+ SQQ
Sbjct: 605 GDELNKLKKSASFGFRTNNTA-TATQSMMASTDEPDVSWVNSLVKDVPAV-SSGLFGSQQ 662

Query: 443 K--HAGDHDMIPPWV 405
           +    G H+ +PPWV
Sbjct: 663 RPYGIGVHEKLPPWV 677


>emb|CAN68018.1| hypothetical protein VITISV_014472 [Vitis vinifera]
          Length = 674

 Score =  116 bits (291), Expect = 5e-24
 Identities = 67/135 (49%), Positives = 87/135 (64%), Gaps = 3/135 (2%)
 Frame = -1

Query: 800 AVMNSRSPAFANRSQSFVDRAPVNHH-PGFGSGANSPTLRXXXXXXXXXSPNGRLEWGYS 624
           AVMNSRS AFA RSQSF+DR  ++H  PGF + +NS TL           P+G+L+WG  
Sbjct: 531 AVMNSRSSAFAKRSQSFIDRGGMSHRSPGFTAASNSATLMSSNLSDWSS-PDGKLDWGIQ 589

Query: 623 GGEGQELQKSASFGYQNGNVASTKNSGAPPSGHEPDVSWVHSLVKDVSSTDAAGLYNSQQ 444
           G E  +L+KSASFG++  N A T       S  EPDVSWV+SLVKDV +  ++GL+ SQQ
Sbjct: 590 GDELNKLKKSASFGFRTNNTA-TATQSMMASTDEPDVSWVNSLVKDVPAV-SSGLFGSQQ 647

Query: 443 K--HAGDHDMIPPWV 405
           +    G H+ +PPWV
Sbjct: 648 RPYGIGVHEKLPPWV 662


>ref|XP_003544707.1| PREDICTED: zinc finger CCCH domain-containing protein 29-like
           isoform 1 [Glycine max] gi|356552715|ref|XP_003544708.1|
           PREDICTED: zinc finger CCCH domain-containing protein
           29-like isoform 2 [Glycine max]
          Length = 680

 Score =  113 bits (282), Expect = 6e-23
 Identities = 61/132 (46%), Positives = 81/132 (61%)
 Frame = -1

Query: 800 AVMNSRSPAFANRSQSFVDRAPVNHHPGFGSGANSPTLRXXXXXXXXXSPNGRLEWGYSG 621
           AVMNSRS AFA RSQSF+DR    HH G  S +NS + R         SP G+L+WG +G
Sbjct: 539 AVMNSRSAAFAKRSQSFIDRGAATHHLGLSSASNS-SCRVSSTLSDWSSPTGKLDWGVNG 597

Query: 620 GEGQELQKSASFGYQNGNVASTKNSGAPPSGHEPDVSWVHSLVKDVSSTDAAGLYNSQQK 441
            +  +L+KS SFG++N  V ++     P  G EPDVSWVHSLVKDV S  +      +Q+
Sbjct: 598 DKLNKLRKSTSFGFRNSGVTASP-IAQPEFGAEPDVSWVHSLVKDVPSERSEIFGAEKQQ 656

Query: 440 HAGDHDMIPPWV 405
           +    +M+PPW+
Sbjct: 657 YDLSKEMLPPWM 668


>ref|XP_003519610.1| PREDICTED: zinc finger CCCH domain-containing protein 29-like
           [Glycine max]
          Length = 657

 Score =  108 bits (269), Expect = 2e-21
 Identities = 62/137 (45%), Positives = 81/137 (59%), Gaps = 5/137 (3%)
 Frame = -1

Query: 800 AVMNSRSPAFANRSQSFVDR--APVNHHPGFGSGANSPTLRXXXXXXXXXSPNGRLEWGY 627
           A+MNSRS AFA RSQSF+DR  A  +HH G  S  ++P+ R         SP G+L+WG 
Sbjct: 520 AMMNSRSAAFAKRSQSFIDRGAAATHHHLGGMSSPSNPSCRVSSTLSGWSSPTGKLDWGV 579

Query: 626 SGGEGQELQKSASFGYQNGNVASTKNS---GAPPSGHEPDVSWVHSLVKDVSSTDAAGLY 456
           +G E  +L+KSASFG++N  V ++ +S     P  G E DVSWVHSLVKDV S  +    
Sbjct: 580 NGDELNKLRKSASFGFRNSGVTASSSSSPIAQPEFGTEQDVSWVHSLVKDVPSERSE--- 636

Query: 455 NSQQKHAGDHDMIPPWV 405
             Q  H     ++ PWV
Sbjct: 637 KQQYDHLSKEMLLSPWV 653


>ref|XP_002277632.2| PREDICTED: zinc finger CCCH domain-containing protein 66-like
           isoform 1 [Vitis vinifera]
          Length = 693

 Score =  107 bits (268), Expect = 2e-21
 Identities = 59/142 (41%), Positives = 87/142 (61%), Gaps = 6/142 (4%)
 Frame = -1

Query: 800 AVMNSRSPAFANRSQSFVDRAPVNHHPGFGSGANSPTLRXXXXXXXXXSPNGRLEWGYSG 621
           AV+NSR+ AFA RSQSF++R+  N H GF S A+S  +          SP+G+L+WG  G
Sbjct: 546 AVLNSRAAAFAKRSQSFIERSAANRHSGFSSSASSAAV-VPSPLSDWGSPDGKLDWGIQG 604

Query: 620 GEGQELQKSASFGYQ-NGNVASTKNSGAPPSGHEPDVSWVHSLVKDVSSTDAAGLYNSQQ 444
            E  +L+KSASFG++ NG+  + + +  P +  EPDVSWV SLVK+  S    G +  ++
Sbjct: 605 EELNKLRKSASFGFRSNGSSYAAQAASVPAAADEPDVSWVQSLVKEAPSA-RPGQFGYEE 663

Query: 443 KH-----AGDHDMIPPWVVTNC 393
           +H     +G  +++PPWV   C
Sbjct: 664 QHQYHLNSGGSEILPPWVEQLC 685


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