BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00033518
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa...   195   3e-48
dbj|BAA22288.1| polyprotein [Oryza australiensis]                     194   6e-48
gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subc...   192   2e-47
gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]     192   2e-47
gb|ABG22008.1| retrotransposon protein, putative, Ty1-copia subc...   189   2e-46

>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
            19.29) [Arabidopsis thaliana] gi|7267136|emb|CAB80804.1|
            putative retrotransposon protein [Arabidopsis thaliana]
          Length = 964

 Score =  195 bits (496), Expect = 3e-48
 Identities = 87/121 (71%), Positives = 110/121 (90%)
 Frame = +1

Query: 1    SGYVFCLNGGPVSWRSSKQSTVADSTTKSEYIAASEAAKEACWIKKFVTELGVVPSIEGP 180
            SG+ FCLNGG VSW+S+KQSTVADSTT++EYIAASEAAKE  WI+KF+TELGVVPSI GP
Sbjct: 825  SGFFFCLNGGAVSWKSTKQSTVADSTTEAEYIAASEAAKEVVWIRKFITELGVVPSISGP 884

Query: 181  VELLCDNTGAIAQAKEPRAHHKSKHVPRKYHLIRDMLNRGDIKVCKVATEANLADPFTKP 360
            ++L CDN GAIAQAKEP++H KSKH+ R+YHLIR++++RGD+K+ +V+T+AN+AD FTKP
Sbjct: 885  IDLYCDNNGAIAQAKEPKSHQKSKHIQRRYHLIREIIDRGDVKISRVSTDANVADHFTKP 944

Query: 361  L 363
            L
Sbjct: 945  L 945


>dbj|BAA22288.1| polyprotein [Oryza australiensis]
          Length = 1317

 Score =  194 bits (493), Expect = 6e-48
 Identities = 89/121 (73%), Positives = 108/121 (89%)
 Frame = +1

Query: 1    SGYVFCLNGGPVSWRSSKQSTVADSTTKSEYIAASEAAKEACWIKKFVTELGVVPSIEGP 180
            SG+VFCLNGG VSW+SSKQ TVADSTT++EYIAASEAAKEA WIKKFV+ELGV+ S  GP
Sbjct: 1178 SGFVFCLNGGAVSWKSSKQDTVADSTTEAEYIAASEAAKEAVWIKKFVSELGVMTSTTGP 1237

Query: 181  VELLCDNTGAIAQAKEPRAHHKSKHVPRKYHLIRDMLNRGDIKVCKVATEANLADPFTKP 360
            + L CDN+GAIAQAKEPR+H KSKH+ R+YHLIR++++RGD+K+CKV T+ N+ADP TKP
Sbjct: 1238 MSLYCDNSGAIAQAKEPRSHQKSKHILRRYHLIREIVDRGDVKICKVHTDLNIADPLTKP 1297

Query: 361  L 363
            L
Sbjct: 1298 L 1298


>gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1248

 Score =  192 bits (488), Expect = 2e-47
 Identities = 87/121 (71%), Positives = 107/121 (88%)
 Frame = +1

Query: 1    SGYVFCLNGGPVSWRSSKQSTVADSTTKSEYIAASEAAKEACWIKKFVTELGVVPSIEGP 180
            SG+VFCLNGG VSW+SSKQ TVADSTT++EYIAASEAAKEA WIKKFV++LGV+ S   P
Sbjct: 1127 SGFVFCLNGGAVSWKSSKQDTVADSTTEAEYIAASEAAKEAVWIKKFVSQLGVMTSASSP 1186

Query: 181  VELLCDNTGAIAQAKEPRAHHKSKHVPRKYHLIRDMLNRGDIKVCKVATEANLADPFTKP 360
            ++L CDN+GAIAQAKEPR+H KSKH+ R+YHLIR+M+ RGD+K+CK+ T+ N+ADP TKP
Sbjct: 1187 MDLYCDNSGAIAQAKEPRSHQKSKHILRRYHLIREMVGRGDVKICKIHTDLNVADPLTKP 1246

Query: 361  L 363
            L
Sbjct: 1247 L 1247


>gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1161

 Score =  192 bits (488), Expect = 2e-47
 Identities = 87/121 (71%), Positives = 107/121 (88%)
 Frame = +1

Query: 1    SGYVFCLNGGPVSWRSSKQSTVADSTTKSEYIAASEAAKEACWIKKFVTELGVVPSIEGP 180
            SG+VFCLNGG VSW+SSKQ TVADSTT++EYIAASEAAKEA WIKKFV++LGV+ S   P
Sbjct: 1040 SGFVFCLNGGAVSWKSSKQDTVADSTTEAEYIAASEAAKEAVWIKKFVSQLGVMTSASSP 1099

Query: 181  VELLCDNTGAIAQAKEPRAHHKSKHVPRKYHLIRDMLNRGDIKVCKVATEANLADPFTKP 360
            ++L CDN+GAIAQAKEPR+H KSKH+ R+YHLIR+M+ RGD+K+CK+ T+ N+ADP TKP
Sbjct: 1100 MDLYCDNSGAIAQAKEPRSHQKSKHILRRYHLIREMVGRGDVKICKIHTDLNVADPLTKP 1159

Query: 361  L 363
            L
Sbjct: 1160 L 1160


>gb|ABG22008.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 932

 Score =  189 bits (481), Expect = 2e-46
 Identities = 85/121 (70%), Positives = 106/121 (87%)
 Frame = +1

Query: 1    SGYVFCLNGGPVSWRSSKQSTVADSTTKSEYIAASEAAKEACWIKKFVTELGVVPSIEGP 180
            SG+VFCLNGG VSW+SSKQ TVADSTT++EYIAASEAAKEA WIKKFV++LGV+ S   P
Sbjct: 802  SGFVFCLNGGAVSWKSSKQDTVADSTTEAEYIAASEAAKEAAWIKKFVSQLGVMTSASSP 861

Query: 181  VELLCDNTGAIAQAKEPRAHHKSKHVPRKYHLIRDMLNRGDIKVCKVATEANLADPFTKP 360
            ++L CDN+GAIAQAKEPR+H KSKH+ R+YHLIR+++ RGD+K+CK+ T+ N+ DP TKP
Sbjct: 862  MDLYCDNSGAIAQAKEPRSHRKSKHILRRYHLIREIVGRGDVKICKIHTDLNVVDPLTKP 921

Query: 361  L 363
            L
Sbjct: 922  L 922