BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00033503
         (1050 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67400.1| hypothetical protein VITISV_025966 [Vitis vinifera]   192   2e-46
emb|CBI22376.3| unnamed protein product [Vitis vinifera]              189   1e-45
ref|XP_002521979.1| pentatricopeptide repeat-containing protein,...   184   4e-44
ref|XP_003555569.1| PREDICTED: pentatricopeptide repeat-containi...   181   3e-43
ref|XP_003590961.1| Pentatricopeptide repeat-containing protein ...   172   9e-41

>emb|CAN67400.1| hypothetical protein VITISV_025966 [Vitis vinifera]
          Length = 550

 Score =  192 bits (487), Expect = 2e-46
 Identities = 110/275 (40%), Positives = 146/275 (53%)
 Frame = +1

Query: 226  MSCPILPQKCLIEVPNLHGLNCGFNEVDXXXXXXXXXXXXXXXXPTCYSGRTISETRFRP 405
            M   ++  K + EVP LHG     +                     C + +T S  +++ 
Sbjct: 1    MELTVIAHKSITEVPCLHGFQTDLSSASDRCSPVKSQAFHLNCSVNC-NFKTQSYLQWKG 59

Query: 406  KWDIFVGSKRRYSVRSKGHVSCVVVDRVIKGLKNDWSSDRRGTDSNENFRGGSVLKKLPD 585
                 V  +    +R  G    V +DRV  G   +WSS R      +  R     KK  +
Sbjct: 60   D---HVSRRNALLLRCIGQERSVCIDRV-NGEDQEWSSGRYAFGVEKKLREQMSSKKYSN 115

Query: 586  ATYMFFDGPFIENDETTNNKILQSXXXXXXXXXXXXXXXXMARCSQIPHLPSCIKLVRGL 765
            ++   FDG F+ NDE TNN+ILQ+                MAR +QIP+ PSCI L+RGL
Sbjct: 116  SSNSSFDGSFVGNDEETNNEILQNLCSKGKLVNASRLIDVMARRNQIPYFPSCINLIRGL 175

Query: 766  IDIGLVDMAAKSLQIMVMSGGVPDIITYNKLIGSLCRNGQLRYAIEFTDSMSFSGCAPDV 945
            I +   + A + L+IMVMSGG+PDIITYN L+G LC+ G L+ AIE  D MS SGC PD 
Sbjct: 176  IKLESTERATRVLKIMVMSGGIPDIITYNMLVGGLCKKGLLKTAIELLDEMSLSGCPPDA 235

Query: 946  ITYNTILRAMFNQGRVDQAIQFWKEQLKRGFPPYI 1050
            ITYNTILR MF+ G  DQAI FWK+QL++G P Y+
Sbjct: 236  ITYNTILRCMFDHGGFDQAIGFWKDQLRKGCPAYL 270



 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 43/137 (31%), Positives = 70/137 (51%)
 Frame = +1

Query: 634  TNNKILQSXXXXXXXXXXXXXXXXMARCSQIPHLPSCIKLVRGLIDIGLVDMAAKSLQIM 813
            T N +L S                M   SQ P + +   L+ GL   GL+D A      M
Sbjct: 342  TYNTLLHSLCTHGYWDEVDEILLIMNMTSQPPTVVTYNILINGLCKYGLLDRAINFFDQM 401

Query: 814  VMSGGVPDIITYNKLIGSLCRNGQLRYAIEFTDSMSFSGCAPDVITYNTILRAMFNQGRV 993
            V    +PDIITYN L+ +LC+ G +  A+    S++ + C+P +ITYN ++  +  +G +
Sbjct: 402  VSHNCLPDIITYNTLLAALCKEGMVDEALHLLHSLNDTRCSPGLITYNIVIDGLAKKGCM 461

Query: 994  DQAIQFWKEQLKRGFPP 1044
            ++A+  + E ++RGF P
Sbjct: 462  EKAMGLYGEMIERGFAP 478


>emb|CBI22376.3| unnamed protein product [Vitis vinifera]
          Length = 554

 Score =  189 bits (480), Expect = 1e-45
 Identities = 109/275 (39%), Positives = 144/275 (52%)
 Frame = +1

Query: 226  MSCPILPQKCLIEVPNLHGLNCGFNEVDXXXXXXXXXXXXXXXXPTCYSGRTISETRFRP 405
            M   ++  K + EVP LHG                           C + +T S  +++ 
Sbjct: 1    MELTVIAHKSITEVPCLHGFQTDLTSASDRCSPVKSQAFQLNCSVNC-NFKTQSYLQWKG 59

Query: 406  KWDIFVGSKRRYSVRSKGHVSCVVVDRVIKGLKNDWSSDRRGTDSNENFRGGSVLKKLPD 585
                 V  +    +R  G    V +DRV  G   +WSS R      +  R     KK  +
Sbjct: 60   D---HVSRRNALLLRCIGQERSVCIDRV-NGEDQEWSSGRYAFGVEKKLREQMSSKKYSN 115

Query: 586  ATYMFFDGPFIENDETTNNKILQSXXXXXXXXXXXXXXXXMARCSQIPHLPSCIKLVRGL 765
            ++    DG F+ NDE TNN+ILQ+                MAR +QIP+ PSCI L+RGL
Sbjct: 116  SSNSSLDGSFVGNDEETNNEILQNLCSKGKLVNASRLIDVMARRNQIPYFPSCINLIRGL 175

Query: 766  IDIGLVDMAAKSLQIMVMSGGVPDIITYNKLIGSLCRNGQLRYAIEFTDSMSFSGCAPDV 945
            I +   + A + L+IMVMSGG+PDIITYN L+G LC+ G L+ AIE  D MS SGC PD 
Sbjct: 176  IKLESTERATRVLKIMVMSGGIPDIITYNMLVGGLCKKGLLKTAIELLDEMSLSGCPPDA 235

Query: 946  ITYNTILRAMFNQGRVDQAIQFWKEQLKRGFPPYI 1050
            ITYNTILR MF+ G  DQAI FWK+QL++G P Y+
Sbjct: 236  ITYNTILRCMFDHGGFDQAIGFWKDQLRKGCPAYL 270



 Score = 80.1 bits (196), Expect = 8e-13
 Identities = 43/137 (31%), Positives = 71/137 (51%)
 Frame = +1

Query: 634  TNNKILQSXXXXXXXXXXXXXXXXMARCSQIPHLPSCIKLVRGLIDIGLVDMAAKSLQIM 813
            T N +L S                M   SQ P + +   L+ GL   GL+D A      M
Sbjct: 342  TYNTLLHSLCTHGYWDEVDEILLIMNTTSQPPTVVTYNILINGLCKYGLLDRAINFFDQM 401

Query: 814  VMSGGVPDIITYNKLIGSLCRNGQLRYAIEFTDSMSFSGCAPDVITYNTILRAMFNQGRV 993
            V    +PDIITYN L+ +LC+ G +  A+    S++ + C+P +ITYN ++  +  +G +
Sbjct: 402  VSHNCLPDIITYNTLLAALCKEGMVDEALHLLHSLNDTRCSPGLITYNIVIDGLAKKGCM 461

Query: 994  DQAIQFWKEQLKRGFPP 1044
            ++A++ + E ++RGF P
Sbjct: 462  EKAMELYGEMIERGFAP 478


>ref|XP_002521979.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223538783|gb|EEF40383.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 496

 Score =  184 bits (466), Expect = 4e-44
 Identities = 91/204 (44%), Positives = 127/204 (62%)
 Frame = +1

Query: 439  YSVRSKGHVSCVVVDRVIKGLKNDWSSDRRGTDSNENFRGGSVLKKLPDATYMFFDGPFI 618
            + ++ KG    V +D+V K   +DWSS+    D    FR   +  K   +   + +GPF+
Sbjct: 36   FPLQCKGLQKSVSIDKVDKNDHDDWSSETLVLDVGRKFRE-QMNTKNHVSPKSYIEGPFV 94

Query: 619  ENDETTNNKILQSXXXXXXXXXXXXXXXXMARCSQIPHLPSCIKLVRGLIDIGLVDMAAK 798
            EN+E  NN+ILQ                 MAR SQIP+   C  L+RG I +  ++ AA+
Sbjct: 95   ENEEEINNEILQHLCNKGRLMDAPRLIDVMARRSQIPNFSCCTNLIRGFIKVDQINKAAR 154

Query: 799  SLQIMVMSGGVPDIITYNKLIGSLCRNGQLRYAIEFTDSMSFSGCAPDVITYNTILRAMF 978
             L+IMVMSGGVPD+ITYN ++G LC+ G+L+ AI+  + MS SGC PDV+TYNTI+R MF
Sbjct: 155  ILKIMVMSGGVPDVITYNMMVGGLCKRGKLKSAIDLLEDMSLSGCPPDVVTYNTIIRCMF 214

Query: 979  NQGRVDQAIQFWKEQLKRGFPPYI 1050
            +    DQA++FWKEQL+RG PPY+
Sbjct: 215  HNANFDQAVRFWKEQLRRGCPPYL 238



 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 33/101 (32%), Positives = 54/101 (53%), Gaps = 7/101 (6%)
 Frame = +1

Query: 751  LVRGLIDIGLVDMAAKSLQIMVMSGGVPDIITYNKLIGSLCRNGQLRYAIEFTDSMSFSG 930
            L+  L   GL D   + L +M  +   P ++TYN LI  LC++G +  AI+F   M +  
Sbjct: 314  LLHSLCSCGLWDEVDEILTVMKETSHPPTVVTYNTLINGLCKSGLVNRAIDFFHQMVYEN 373

Query: 931  CAPDVITYNTILRAMFNQ-------GRVDQAIQFWKEQLKR 1032
            C PD++TYNT+L A+  +        + + A++  +E  KR
Sbjct: 374  CLPDIVTYNTLLGALCKEECWMSPSSQFEDAVEILREMGKR 414


>ref|XP_003555569.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08610-like
            [Glycine max]
          Length = 589

 Score =  181 bits (458), Expect = 3e-43
 Identities = 95/214 (44%), Positives = 129/214 (60%), Gaps = 6/214 (2%)
 Frame = +1

Query: 427  SKRRYSVRSKGHVSC------VVVDRVIKGLKNDWSSDRRGTDSNENFRGGSVLKKLPDA 588
            S  +YS+  KG + C      V++DR  +    DW           N R     KK  ++
Sbjct: 58   STTKYSIPWKG-LRCRSFQRSVLIDRANEVDHEDWCFGSDYVGERRNSRELLDSKKSVNS 116

Query: 589  TYMFFDGPFIENDETTNNKILQSXXXXXXXXXXXXXXXXMARCSQIPHLPSCIKLVRGLI 768
              +  + PF++NDE TNN+ILQ                 MAR SQIPH PSC  L+RG I
Sbjct: 117  PTLSPEAPFVQNDEMTNNEILQRLCSRGKLTVAARLIDVMARKSQIPHFPSCTNLIRGFI 176

Query: 769  DIGLVDMAAKSLQIMVMSGGVPDIITYNKLIGSLCRNGQLRYAIEFTDSMSFSGCAPDVI 948
              GLVD A K+L  MVMSGGVPD ITYN +IG LC+NG+LR A++  + MS SGC+PD I
Sbjct: 177  RKGLVDEACKTLNKMVMSGGVPDTITYNMVIGGLCKNGRLRSALDLVEDMSLSGCSPDAI 236

Query: 949  TYNTILRAMFNQGRVDQAIQFWKEQLKRGFPPYI 1050
            TYN+I+R +F++G  +QA+ FW++QL++G PPY+
Sbjct: 237  TYNSIIRCLFDKGNFNQAVNFWRDQLRKGCPPYL 270



 Score = 68.6 bits (166), Expect = 3e-09
 Identities = 34/86 (39%), Positives = 50/86 (58%)
 Frame = +1

Query: 751  LVRGLIDIGLVDMAAKSLQIMVMSGGVPDIITYNKLIGSLCRNGQLRYAIEFTDSMSFSG 930
            L+  LI+ G  D     L+IM  +   P  +TYN L+  LC++G L  AI F  +M    
Sbjct: 346  LIHSLINHGYWDEVDDILKIMNETSSPPTHVTYNILLNGLCKSGLLDRAISFYSTMVTEN 405

Query: 931  CAPDVITYNTILRAMFNQGRVDQAIQ 1008
            C+PD+ITYNT+L  +  +G +D+ IQ
Sbjct: 406  CSPDIITYNTLLSGLCKEGFIDEGIQ 431



 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 31/98 (31%), Positives = 52/98 (53%)
 Frame = +1

Query: 751  LVRGLIDIGLVDMAAKSLQIMVMSGGVPDIITYNKLIGSLCRNGQLRYAIEFTDSMSFSG 930
            L+ GL   GL+D A      MV     PDIITYN L+  LC+ G +   I+  + +  + 
Sbjct: 381  LLNGLCKSGLLDRAISFYSTMVTENCSPDIITYNTLLSGLCKEGFIDEGIQLLNLLVGTS 440

Query: 931  CAPDVITYNTILRAMFNQGRVDQAIQFWKEQLKRGFPP 1044
            C+P ++TYN ++  +   G ++ A + + E + +G  P
Sbjct: 441  CSPGLVTYNIVIDGLARLGSMESAKELYDEMVDKGIIP 478


>ref|XP_003590961.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355480009|gb|AES61212.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 573

 Score =  172 bits (437), Expect = 9e-41
 Identities = 89/193 (46%), Positives = 119/193 (61%)
 Frame = +1

Query: 472  VVVDRVIKGLKNDWSSDRRGTDSNENFRGGSVLKKLPDATYMFFDGPFIENDETTNNKIL 651
            V+ DRV +    DW  +       E+     ++  L  +T +  +G F+ N E T+NKIL
Sbjct: 59   VLSDRVDEVDHEDWGFESNTGKRVESSELVHLVTSLNSST-LSAEGQFVRNGELTSNKIL 117

Query: 652  QSXXXXXXXXXXXXXXXXMARCSQIPHLPSCIKLVRGLIDIGLVDMAAKSLQIMVMSGGV 831
            QS                MAR SQIPH PSC  L+RGLI IG VD   K + +MVMSGGV
Sbjct: 118  QSLCSRGKLTAAARLVEVMARMSQIPHFPSCTNLIRGLIRIGQVDKGCKIMNMMVMSGGV 177

Query: 832  PDIITYNKLIGSLCRNGQLRYAIEFTDSMSFSGCAPDVITYNTILRAMFNQGRVDQAIQF 1011
            PD IT+N +IGSLC+ G L+ A+EF + MS SGC PD  TYNTI+R +F++G  + A+ F
Sbjct: 178  PDTITFNAVIGSLCKRGHLKSALEFLEGMSLSGCLPDAKTYNTIIRCIFDKGDPNLAVSF 237

Query: 1012 WKEQLKRGFPPYI 1050
            WK+QL++GFPPY+
Sbjct: 238  WKDQLRKGFPPYL 250



 Score = 64.3 bits (155), Expect = 5e-08
 Identities = 32/86 (37%), Positives = 51/86 (59%)
 Frame = +1

Query: 751  LVRGLIDIGLVDMAAKSLQIMVMSGGVPDIITYNKLIGSLCRNGQLRYAIEFTDSMSFSG 930
            L+  L   G  D+    L+IM  +   P ++TYN L+ SLC++G L  +I     M    
Sbjct: 326  LIHSLSLHGYSDVVDDILKIMNETSISPTLVTYNILLNSLCKSGFLDRSISLYIKMVSEN 385

Query: 931  CAPDVITYNTILRAMFNQGRVDQAIQ 1008
            C+PD++TYNT+L A+  +G +D++IQ
Sbjct: 386  CSPDIVTYNTLLNALCKEGFIDESIQ 411



 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 32/113 (28%), Positives = 57/113 (50%)
 Frame = +1

Query: 706  MARCSQIPHLPSCIKLVRGLIDIGLVDMAAKSLQIMVMSGGVPDIITYNKLIGSLCRNGQ 885
            M   S  P L +   L+  L   G +D +      MV     PDI+TYN L+ +LC+ G 
Sbjct: 346  MNETSISPTLVTYNILLNSLCKSGFLDRSISLYIKMVSENCSPDIVTYNTLLNALCKEGF 405

Query: 886  LRYAIEFTDSMSFSGCAPDVITYNTILRAMFNQGRVDQAIQFWKEQLKRGFPP 1044
            +  +I+   S+S + C+P ++TYN ++  +     +  A + + E +++G  P
Sbjct: 406  IDESIQLLHSLSGTNCSPGLVTYNIVINGLARMRSIKSAKEMYGEMVEKGIDP 458