BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00033501
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...    70   2e-19
gb|AAD17398.1| putative non-LTR retroelement reverse transcripta...    59   1e-18
gb|ABD64923.1| hypothetical protein 24.t00067 [Brassica oleracea]      68   2e-18
dbj|BAF01759.1| putative non-LTR retroelement reverse transcript...    59   2e-18
emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulga...    64   4e-18

>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1374

 Score = 69.7 bits (169), Expect(2) = 2e-19
 Identities = 30/59 (50%), Positives = 41/59 (69%)
 Frame = +1

Query: 157 VDSFFFSSRLLNSINHTQVCLIPKKTSPMSMTDFRPISLCNIVVKIIGRIMTNRLRSVL 333
           V +FF S  +   +N T +CLIPK      MTDFRPISLCN++ K+IG++M NRL+ +L
Sbjct: 471 VQAFFRSGSIEEGMNKTNICLIPKILKAEKMTDFRPISLCNVIYKVIGKLMANRLKKIL 529



 Score = 50.4 bits (119), Expect(2) = 2e-19
 Identities = 23/55 (41%), Positives = 33/55 (60%)
 Frame = +2

Query: 5   MNRHLIRVVTSEEVKRAVFEMPTDKSPGPDGMTILLFQSYWHIILFDMFEMLIVF 169
           MN +L+  +T EEV+RA F +   K PGPDGM   L+Q +W  +   + EM+  F
Sbjct: 420 MNNNLLAPITKEEVQRATFSINPHKCPGPDGMNGFLYQQFWETMGDQITEMVQAF 474


>gb|AAD17398.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1225

 Score = 59.3 bits (142), Expect(2) = 1e-18
 Identities = 24/53 (45%), Positives = 38/53 (71%)
 Frame = +2

Query: 2   DMNRHLIRVVTSEEVKRAVFEMPTDKSPGPDGMTILLFQSYWHIILFDMFEML 160
           +MN+ L +V++ EEVKRA+F +  DK+PGPDGMT   +Q YW +   D+ +++
Sbjct: 366 EMNKSLTKVISPEEVKRALFSLNPDKAPGPDGMTAFFYQHYWDLTGPDLIKLV 418



 Score = 58.5 bits (140), Expect(2) = 1e-18
 Identities = 26/55 (47%), Positives = 37/55 (67%)
 Frame = +1

Query: 169 FFSSRLLNSINHTQVCLIPKKTSPMSMTDFRPISLCNIVVKIIGRIMTNRLRSVL 333
           FF  RL    N T +CLIPK   P  M +FRPISLCN+  K+I +++++RL+ +L
Sbjct: 426 FFDERL----NETNICLIPKTERPRKMAEFRPISLCNVSYKVISKVLSSRLKRLL 476


>gb|ABD64923.1| hypothetical protein 24.t00067 [Brassica oleracea]
          Length = 381

 Score = 67.8 bits (164), Expect(2) = 2e-18
 Identities = 29/62 (46%), Positives = 45/62 (72%)
 Frame = +1

Query: 148 VRNVDSFFFSSRLLNSINHTQVCLIPKKTSPMSMTDFRPISLCNIVVKIIGRIMTNRLRS 327
           V  V  FF +    + +NHT +CLIPK T+P++M DFRPI+LCN++ KII +I++  ++S
Sbjct: 270 VEEVRHFFNTGEFYSDLNHTNLCLIPKITNPITMKDFRPIALCNVMYKIISKILSLCMKS 329

Query: 328 VL 333
           +L
Sbjct: 330 IL 331



 Score = 49.3 bits (116), Expect(2) = 2e-18
 Identities = 20/45 (44%), Positives = 32/45 (71%)
 Frame = +2

Query: 2   DMNRHLIRVVTSEEVKRAVFEMPTDKSPGPDGMTILLFQSYWHII 136
           + N +L R VT+EEV+ +VF +   ++PGPDG+T   +Q+YW I+
Sbjct: 221 ECNAYLSRDVTAEEVRISVFSIGATRAPGPDGLTASFYQTYWDIV 265


>dbj|BAF01759.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 400

 Score = 58.5 bits (140), Expect(2) = 2e-18
 Identities = 24/52 (46%), Positives = 37/52 (71%)
 Frame = +2

Query: 5   MNRHLIRVVTSEEVKRAVFEMPTDKSPGPDGMTILLFQSYWHIILFDMFEML 160
           MN+ L +V++ EEVKRA+F +  DK+PGPDGMT   +Q YW +   D+ +++
Sbjct: 1   MNKSLTKVISPEEVKRALFSLNPDKAPGPDGMTAFFYQHYWDLTGPDLIKLV 52



 Score = 58.5 bits (140), Expect(2) = 2e-18
 Identities = 26/55 (47%), Positives = 37/55 (67%)
 Frame = +1

Query: 169 FFSSRLLNSINHTQVCLIPKKTSPMSMTDFRPISLCNIVVKIIGRIMTNRLRSVL 333
           FF  RL    N T +CLIPK   P  M +FRPISLCN+  K+I +++++RL+ +L
Sbjct: 60  FFDERL----NETNICLIPKTERPRKMAEFRPISLCNVSYKVISKVLSSRLKRLL 110


>emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1389

 Score = 64.3 bits (155), Expect(2) = 4e-18
 Identities = 29/61 (47%), Positives = 41/61 (67%)
 Frame = +1

Query: 151 RNVDSFFFSSRLLNSINHTQVCLIPKKTSPMSMTDFRPISLCNIVVKIIGRIMTNRLRSV 330
           R V +FF S  +L  +NHT + LIPK   P++   FRPISLC+ + K+I +I+TNRL+  
Sbjct: 485 RAVQAFFHSGYMLKEVNHTFLALIPKVDKPVNANHFRPISLCSTIYKVISKIITNRLKIT 544

Query: 331 L 333
           L
Sbjct: 545 L 545



 Score = 51.6 bits (122), Expect(2) = 4e-18
 Identities = 22/43 (51%), Positives = 28/43 (65%)
 Frame = +2

Query: 8   NRHLIRVVTSEEVKRAVFEMPTDKSPGPDGMTILLFQSYWHII 136
           N +L   V+ EE+K AVF++  DKSPGPDG     FQ YW +I
Sbjct: 437 NAYLTSAVSPEEIKNAVFDLAPDKSPGPDGFPPYFFQKYWTLI 479