BLASTX nr result

ID: Lithospermum22_contig00033472 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00033472
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003628922.1| Pleiotropic drug resistance protein [Medicag...   114   8e-24
pdb|1UHT|A Chain A, Solution Structure Of The Fha Domain Of Arab...   105   3e-21
ref|NP_193185.1| SMAD/FHA domain-containing protein [Arabidopsis...   105   3e-21
ref|XP_002868279.1| hypothetical protein ARALYDRAFT_493457 [Arab...   104   7e-21
ref|XP_002315723.1| predicted protein [Populus trichocarpa] gi|2...   103   1e-20

>ref|XP_003628922.1| Pleiotropic drug resistance protein [Medicago truncatula]
           gi|355522944|gb|AET03398.1| Pleiotropic drug resistance
           protein [Medicago truncatula]
          Length = 817

 Score =  114 bits (285), Expect = 8e-24
 Identities = 55/102 (53%), Positives = 70/102 (68%)
 Frame = -2

Query: 313 PNLKLKVTEGPSSGSEFEFTPKEIVKIGRVVRGNKVSIKDAGISSKHLLIQFDIESGNWD 134
           P L L++  GP +G   +F P   VKIGRV+RGN + IKD GIS+KHL I FD  SGNW 
Sbjct: 8   PTLTLQILAGPRNGETHQFEPGSTVKIGRVIRGNNLPIKDPGISTKHLTIHFD--SGNWI 65

Query: 133 ITDLDSSNGTIVSSKPLTPNIPYDIEDNDVIKFGEATVIRVN 8
           +TDLDSSNGT++ ++P+ PN P+ + D   IK GE T I VN
Sbjct: 66  LTDLDSSNGTVLDNEPVPPNTPFHLCDGSTIKIGEVTSILVN 107


>pdb|1UHT|A Chain A, Solution Structure Of The Fha Domain Of Arabidopsis
           Thaliana Hypothetical Protein
          Length = 118

 Score =  105 bits (263), Expect = 3e-21
 Identities = 52/105 (49%), Positives = 72/105 (68%)
 Frame = -2

Query: 322 IVGPNLKLKVTEGPSSGSEFEFTPKEIVKIGRVVRGNKVSIKDAGISSKHLLIQFDIESG 143
           +V P+L+L   +GP  G   ++ P   +++GR+VRGN+++IKDAGIS+KHL I+ D  SG
Sbjct: 8   MVTPSLRLVFVKGPREGDALDYKPGSTIRVGRIVRGNEIAIKDAGISTKHLRIESD--SG 65

Query: 142 NWDITDLDSSNGTIVSSKPLTPNIPYDIEDNDVIKFGEATVIRVN 8
           NW I DL SSNGT+++S  L P    ++ D DVIK GE T I VN
Sbjct: 66  NWVIQDLGSSNGTLLNSNALDPETSVNLGDGDVIKLGEYTSILVN 110


>ref|NP_193185.1| SMAD/FHA domain-containing protein [Arabidopsis thaliana]
           gi|73921130|sp|O23305.1|Y4449_ARATH RecName: Full=FHA
           domain-containing protein At4g14490
           gi|2244805|emb|CAB10228.1| hypothetical protein
           [Arabidopsis thaliana] gi|7268155|emb|CAB78491.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|20466564|gb|AAM20599.1| unknown protein [Arabidopsis
           thaliana] gi|22136374|gb|AAM91265.1| unknown protein
           [Arabidopsis thaliana] gi|332658050|gb|AEE83450.1|
           SMAD/FHA domain-containing protein [Arabidopsis
           thaliana]
          Length = 386

 Score =  105 bits (263), Expect = 3e-21
 Identities = 52/105 (49%), Positives = 72/105 (68%)
 Frame = -2

Query: 322 IVGPNLKLKVTEGPSSGSEFEFTPKEIVKIGRVVRGNKVSIKDAGISSKHLLIQFDIESG 143
           +V P+L+L   +GP  G   ++ P   +++GR+VRGN+++IKDAGIS+KHL I+ D  SG
Sbjct: 1   MVTPSLRLVFVKGPREGDALDYKPGSTIRVGRIVRGNEIAIKDAGISTKHLRIESD--SG 58

Query: 142 NWDITDLDSSNGTIVSSKPLTPNIPYDIEDNDVIKFGEATVIRVN 8
           NW I DL SSNGT+++S  L P    ++ D DVIK GE T I VN
Sbjct: 59  NWVIQDLGSSNGTLLNSNALDPETSVNLGDGDVIKLGEYTSILVN 103


>ref|XP_002868279.1| hypothetical protein ARALYDRAFT_493457 [Arabidopsis lyrata subsp.
           lyrata] gi|297314115|gb|EFH44538.1| hypothetical protein
           ARALYDRAFT_493457 [Arabidopsis lyrata subsp. lyrata]
          Length = 360

 Score =  104 bits (260), Expect = 7e-21
 Identities = 52/102 (50%), Positives = 70/102 (68%)
 Frame = -2

Query: 313 PNLKLKVTEGPSSGSEFEFTPKEIVKIGRVVRGNKVSIKDAGISSKHLLIQFDIESGNWD 134
           P+L+L   +GP  G   E+     +++GR+VRGN+++IKDAGIS+KHL I     SGNW 
Sbjct: 4   PSLRLLFVKGPRKGDALEYKLGSTIRVGRIVRGNEIAIKDAGISTKHLWI--GSVSGNWV 61

Query: 133 ITDLDSSNGTIVSSKPLTPNIPYDIEDNDVIKFGEATVIRVN 8
           + DL SSNGT+++SK L P  P D+ D DVI+FGE T I VN
Sbjct: 62  VQDLGSSNGTLLNSKDLDPETPVDLGDGDVIEFGEYTSIVVN 103


>ref|XP_002315723.1| predicted protein [Populus trichocarpa] gi|222864763|gb|EEF01894.1|
           predicted protein [Populus trichocarpa]
          Length = 383

 Score =  103 bits (257), Expect = 1e-20
 Identities = 55/101 (54%), Positives = 64/101 (63%)
 Frame = -2

Query: 313 PNLKLKVTEGPSSGSEFEFTPKEIVKIGRVVRGNKVSIKDAGISSKHLLIQFDIESGNWD 134
           P LKL +  GP  G   EF P   V+IGRVVRGN V IKDAGISSKHL I    E G W 
Sbjct: 4   PILKLTMVRGPREGETLEFRPGSTVRIGRVVRGNNVPIKDAGISSKHLAIV--SEPGKWS 61

Query: 133 ITDLDSSNGTIVSSKPLTPNIPYDIEDNDVIKFGEATVIRV 11
           + DLDSSNGT +++  L+P   +D+ D D IK GE T I V
Sbjct: 62  LQDLDSSNGTTLNTTTLSPYKSFDLRDGDTIKLGELTSILV 102


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