BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00033421
         (478 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22243.3| unnamed protein product [Vitis vinifera]              233   2e-59
ref|XP_002283796.1| PREDICTED: pentatricopeptide repeat-containi...   233   2e-59
ref|XP_002324070.1| predicted protein [Populus trichocarpa] gi|2...   224   7e-57
ref|XP_002533114.1| pentatricopeptide repeat-containing protein,...   219   2e-55
ref|XP_004141574.1| PREDICTED: pentatricopeptide repeat-containi...   216   1e-54

>emb|CBI22243.3| unnamed protein product [Vitis vinifera]
          Length = 526

 Score =  233 bits (593), Expect = 2e-59
 Identities = 112/157 (71%), Positives = 128/157 (81%)
 Frame = -3

Query: 476 GFECNKFCRNTLIYFHGNVGDIEIAGKLFDDVAKRDVVAWSAMTAGYAKRGELRVARQIF 297
           GFE N F RNTLIYFH N GD+ +A  LFD  AKRDVVAWSA+TAGYA+RGEL VARQ+F
Sbjct: 108 GFESNTFVRNTLIYFHANCGDLAVARALFDGSAKRDVVAWSALTAGYARRGELGVARQLF 167

Query: 296 DEMPEKDMVSWNVMITGYLKHGDMESARDLFNVVPKRDVVTWNAMISGYVSSKEYDKSLA 117
           DEMP KD+VSWNVMITGY K G+MESAR LF+ VPKRDVVTWNAMI+GYV      ++L 
Sbjct: 168 DEMPVKDLVSWNVMITGYAKRGEMESARKLFDEVPKRDVVTWNAMIAGYVLCGSNQQALE 227

Query: 116 MFEEMKECGEYPDEVTMLSLLSACAELGSLDVGEKMH 6
           MFEEM+  GE PDEVTMLSLLSAC +LG LD G+++H
Sbjct: 228 MFEEMRSVGELPDEVTMLSLLSACTDLGDLDAGQRIH 264



 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 56/186 (30%), Positives = 89/186 (47%), Gaps = 40/186 (21%)
 Frame = -3

Query: 449 NTLIYFHGNVGDIEIAGKLFDDVAKRDVVAWSAMTAGYAKRGELRVARQIFDEM------ 288
           N +I  +   G++E A KLFD+V KRDVV W+AM AGY   G  + A ++F+EM      
Sbjct: 179 NVMITGYAKRGEMESARKLFDEVPKRDVVTWNAMIAGYVLCGSNQQALEMFEEMRSVGEL 238

Query: 287 -PEKDMVSW---------------------------------NVMITGYLKHGDMESARD 210
             E  M+S                                  N +I  Y K G +  A +
Sbjct: 239 PDEVTMLSLLSACTDLGDLDAGQRIHCCISEMGFRDLSVLLGNALIDMYAKCGSIVRALE 298

Query: 209 LFNVVPKRDVVTWNAMISGYVSSKEYDKSLAMFEEMKECGEYPDEVTMLSLLSACAELGS 30
           +F  + ++DV TWN+++ G       +KS+ +F EM++    PDE+T + +L AC+  G 
Sbjct: 299 VFQGMREKDVSTWNSVLGGLAFHGHAEKSIHLFTEMRKLKIRPDEITFVGVLVACSHAGR 358

Query: 29  LDVGEK 12
           ++ G +
Sbjct: 359 VEEGRQ 364


>ref|XP_002283796.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15300-like [Vitis vinifera]
          Length = 550

 Score =  233 bits (593), Expect = 2e-59
 Identities = 112/157 (71%), Positives = 128/157 (81%)
 Frame = -3

Query: 476 GFECNKFCRNTLIYFHGNVGDIEIAGKLFDDVAKRDVVAWSAMTAGYAKRGELRVARQIF 297
           GFE N F RNTLIYFH N GD+ +A  LFD  AKRDVVAWSA+TAGYA+RGEL VARQ+F
Sbjct: 143 GFESNTFVRNTLIYFHANCGDLAVARALFDGSAKRDVVAWSALTAGYARRGELGVARQLF 202

Query: 296 DEMPEKDMVSWNVMITGYLKHGDMESARDLFNVVPKRDVVTWNAMISGYVSSKEYDKSLA 117
           DEMP KD+VSWNVMITGY K G+MESAR LF+ VPKRDVVTWNAMI+GYV      ++L 
Sbjct: 203 DEMPVKDLVSWNVMITGYAKRGEMESARKLFDEVPKRDVVTWNAMIAGYVLCGSNQQALE 262

Query: 116 MFEEMKECGEYPDEVTMLSLLSACAELGSLDVGEKMH 6
           MFEEM+  GE PDEVTMLSLLSAC +LG LD G+++H
Sbjct: 263 MFEEMRSVGELPDEVTMLSLLSACTDLGDLDAGQRIH 299



 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 56/186 (30%), Positives = 89/186 (47%), Gaps = 40/186 (21%)
 Frame = -3

Query: 449 NTLIYFHGNVGDIEIAGKLFDDVAKRDVVAWSAMTAGYAKRGELRVARQIFDEM------ 288
           N +I  +   G++E A KLFD+V KRDVV W+AM AGY   G  + A ++F+EM      
Sbjct: 214 NVMITGYAKRGEMESARKLFDEVPKRDVVTWNAMIAGYVLCGSNQQALEMFEEMRSVGEL 273

Query: 287 -PEKDMVSW---------------------------------NVMITGYLKHGDMESARD 210
             E  M+S                                  N +I  Y K G +  A +
Sbjct: 274 PDEVTMLSLLSACTDLGDLDAGQRIHCCISEMGFRDLSVLLGNALIDMYAKCGSIVRALE 333

Query: 209 LFNVVPKRDVVTWNAMISGYVSSKEYDKSLAMFEEMKECGEYPDEVTMLSLLSACAELGS 30
           +F  + ++DV TWN+++ G       +KS+ +F EM++    PDE+T + +L AC+  G 
Sbjct: 334 VFQGMREKDVSTWNSVLGGLAFHGHAEKSIHLFTEMRKLKIRPDEITFVGVLVACSHAGR 393

Query: 29  LDVGEK 12
           ++ G +
Sbjct: 394 VEEGRQ 399


>ref|XP_002324070.1| predicted protein [Populus trichocarpa] gi|222867072|gb|EEF04203.1|
           predicted protein [Populus trichocarpa]
          Length = 546

 Score =  224 bits (570), Expect = 7e-57
 Identities = 107/157 (68%), Positives = 128/157 (81%)
 Frame = -3

Query: 476 GFECNKFCRNTLIYFHGNVGDIEIAGKLFDDVAKRDVVAWSAMTAGYAKRGELRVARQIF 297
           GFE N F RNTLIYFH N GD+ IA  +F D+ +R VV+WSA+TAGYA+RGEL VARQIF
Sbjct: 143 GFEVNSFVRNTLIYFHSNCGDLVIARSIFYDLPERSVVSWSALTAGYARRGELGVARQIF 202

Query: 296 DEMPEKDMVSWNVMITGYLKHGDMESARDLFNVVPKRDVVTWNAMISGYVSSKEYDKSLA 117
           DEMP KD+VSWNVMITGY+K+G+ME+AR LF+  P++DVVTWN MI+GYV   E  ++L 
Sbjct: 203 DEMPVKDLVSWNVMITGYVKNGEMENARTLFDEAPEKDVVTWNTMIAGYVLRGEQRQALE 262

Query: 116 MFEEMKECGEYPDEVTMLSLLSACAELGSLDVGEKMH 6
           MFEEM+  GE PDEVTMLSLLSACA+LG L VG K+H
Sbjct: 263 MFEEMRNVGECPDEVTMLSLLSACADLGDLQVGRKLH 299



 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 52/187 (27%), Positives = 88/187 (47%), Gaps = 41/187 (21%)
 Frame = -3

Query: 449 NTLIYFHGNVGDIEIAGKLFDDVAKRDVVAWSAMTAGYAKRGELRVARQIFDEM------ 288
           N +I  +   G++E A  LFD+  ++DVV W+ M AGY  RGE R A ++F+EM      
Sbjct: 214 NVMITGYVKNGEMENARTLFDEAPEKDVVTWNTMIAGYVLRGEQRQALEMFEEMRNVGEC 273

Query: 287 -PEKDMVSW---------------------------------NVMITGYLKHGDMESARD 210
             E  M+S                                  N ++  Y K G +E A  
Sbjct: 274 PDEVTMLSLLSACADLGDLQVGRKLHCSISEMTRGDLSVLLGNALVDMYAKCGSIEIALQ 333

Query: 209 LFNVVPKRDVVTWNAMISGYVSSKEYDKSLAMFEEMKECGEY-PDEVTMLSLLSACAELG 33
           +F  + ++DV TWN++I G       ++S+ +F EM+      P+E+T + ++ AC+  G
Sbjct: 334 VFKKMREKDVTTWNSVIGGLAFHGHAEESIKLFAEMQALKNIKPNEITFVGVIVACSHAG 393

Query: 32  SLDVGEK 12
           +++ G +
Sbjct: 394 NVEEGRR 400


>ref|XP_002533114.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223527077|gb|EEF29259.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 480

 Score =  219 bits (557), Expect = 2e-55
 Identities = 103/157 (65%), Positives = 129/157 (82%)
 Frame = -3

Query: 476 GFECNKFCRNTLIYFHGNVGDIEIAGKLFDDVAKRDVVAWSAMTAGYAKRGELRVARQIF 297
           GF+ N F RNTL+Y+H   GD+ IA ++FDD AKRDVVAWSA+TAGYA+RGEL +AR++F
Sbjct: 143 GFQENTFVRNTLVYYHAKCGDLGIAREMFDDSAKRDVVAWSALTAGYARRGELCMARRLF 202

Query: 296 DEMPEKDMVSWNVMITGYLKHGDMESARDLFNVVPKRDVVTWNAMISGYVSSKEYDKSLA 117
           DEMP KD+V+WNV+IT Y+K G+M  AR LFN VP+RDVVTWNAMI+G+V   E +++L 
Sbjct: 203 DEMPVKDLVAWNVIITAYVKRGEMACARKLFNEVPRRDVVTWNAMIAGFVHCGENEQALE 262

Query: 116 MFEEMKECGEYPDEVTMLSLLSACAELGSLDVGEKMH 6
           MFEEM   GE PDEVTMLSLLSAC +LG L+VG+K+H
Sbjct: 263 MFEEMISVGEQPDEVTMLSLLSACTDLGDLEVGKKVH 299



 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 52/187 (27%), Positives = 88/187 (47%), Gaps = 41/187 (21%)
 Frame = -3

Query: 449 NTLIYFHGNVGDIEIAGKLFDDVAKRDVVAWSAMTAGYAKRGELRVARQIFDEM------ 288
           N +I  +   G++  A KLF++V +RDVV W+AM AG+   GE   A ++F+EM      
Sbjct: 214 NVIITAYVKRGEMACARKLFNEVPRRDVVTWNAMIAGFVHCGENEQALEMFEEMISVGEQ 273

Query: 287 -PEKDMVSW---------------------------------NVMITGYLKHGDMESARD 210
             E  M+S                                  N +   Y K G +E A +
Sbjct: 274 PDEVTMLSLLSACTDLGDLEVGKKVHSSILEMSLGDLSVLLGNALTYMYAKCGSIERALE 333

Query: 209 LFNVVPKRDVVTWNAMISGYVSSKEYDKSLAMFEEMKECGEY-PDEVTMLSLLSACAELG 33
           +F  + ++DV TWN++I G       ++S+ +F EM+      P+E+T + +L AC+  G
Sbjct: 334 VFRGMREKDVTTWNSVIVGLALHGHAEESIHLFREMQRLNNIKPNEITFVGVLVACSHAG 393

Query: 32  SLDVGEK 12
            ++ G++
Sbjct: 394 KVEEGQR 400


>ref|XP_004141574.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15300-like [Cucumis sativus]
          Length = 542

 Score =  216 bits (551), Expect = 1e-54
 Identities = 102/157 (64%), Positives = 128/157 (81%)
 Frame = -3

Query: 476 GFECNKFCRNTLIYFHGNVGDIEIAGKLFDDVAKRDVVAWSAMTAGYAKRGELRVARQIF 297
           GF+ N F RNTLIYFH N GD+  A  LFD  AKR+VV WSA+TAGYA+RG+L VARQ+F
Sbjct: 143 GFQSNTFVRNTLIYFHANCGDLATARALFDASAKREVVPWSALTAGYARRGKLDVARQLF 202

Query: 296 DEMPEKDMVSWNVMITGYLKHGDMESARDLFNVVPKRDVVTWNAMISGYVSSKEYDKSLA 117
           DEMP KD+VSWNVMIT Y KHG+ME AR LF+ VPK+DVVTWNAMI+GYV S+   ++L 
Sbjct: 203 DEMPMKDLVSWNVMITAYAKHGEMEKARKLFDEVPKKDVVTWNAMIAGYVLSRLNKEALE 262

Query: 116 MFEEMKECGEYPDEVTMLSLLSACAELGSLDVGEKMH 6
           MF+ M++ G+ PD+VTMLS+LSA A+LG L++G+K+H
Sbjct: 263 MFDAMRDLGQRPDDVTMLSILSASADLGDLEIGKKIH 299



 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 54/189 (28%), Positives = 90/189 (47%), Gaps = 40/189 (21%)
 Frame = -3

Query: 449 NTLIYFHGNVGDIEIAGKLFDDVAKRDVVAWSAMTAGY---------------------- 336
           N +I  +   G++E A KLFD+V K+DVV W+AM AGY                      
Sbjct: 214 NVMITAYAKHGEMEKARKLFDEVPKKDVVTWNAMIAGYVLSRLNKEALEMFDAMRDLGQR 273

Query: 335 -------------AKRGELRVA----RQIFDEM-PEKDMVSWNVMITGYLKHGDMESARD 210
                        A  G+L +     R IFD    +  ++  N +I  Y K G + +A +
Sbjct: 274 PDDVTMLSILSASADLGDLEIGKKIHRSIFDMCCGDLSVLLSNALIDMYAKCGSIGNALE 333

Query: 209 LFNVVPKRDVVTWNAMISGYVSSKEYDKSLAMFEEMKECGEYPDEVTMLSLLSACAELGS 30
           +F  + K+D  +WN++I G       ++S+ +F+EM      P+E+T +++L AC+  G 
Sbjct: 334 VFQGMRKKDTSSWNSIIGGLALHGHAEESINLFQEMLRLKMKPNEITFVAVLVACSHAGK 393

Query: 29  LDVGEKMHF 3
           +  G +M+F
Sbjct: 394 VREG-RMYF 401