BLASTX nr result

ID: Lithospermum22_contig00033348 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00033348
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]         139   3e-31
emb|CAN74160.1| hypothetical protein VITISV_018405 [Vitis vinifera]   135   3e-30
emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera]   135   3e-30
emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera]   135   5e-30
emb|CAN59934.1| hypothetical protein VITISV_001876 [Vitis vinifera]   134   6e-30

>gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]
          Length = 1415

 Score =  139 bits (349), Expect = 3e-31
 Identities = 64/96 (66%), Positives = 77/96 (80%)
 Frame = -3

Query: 292 KTPQHNGIAERMNRTIIEKVRCMLSHACLPRSFWGEVMCAAIHVINLSPTAVLKGKVPEE 113
           K PQ NG+AERMNRTI+E+VRCML  A LP SFW E +  A+HVINLSP   LK +VP++
Sbjct: 572 KIPQLNGLAERMNRTIMERVRCMLDDAKLPSSFWAEAVSTAVHVINLSPVIALKNEVPDK 631

Query: 112 VCSGKERSYKHLRVFGCKVFVHIPKDERSKLDNKSR 5
           V  GK+ SY HLRVFGCK FVH+P+DERSKLD+K+R
Sbjct: 632 VWCGKDVSYDHLRVFGCKAFVHVPRDERSKLDSKTR 667


>emb|CAN74160.1| hypothetical protein VITISV_018405 [Vitis vinifera]
          Length = 1302

 Score =  135 bits (341), Expect = 3e-30
 Identities = 62/96 (64%), Positives = 76/96 (79%)
 Frame = -3

Query: 292 KTPQHNGIAERMNRTIIEKVRCMLSHACLPRSFWGEVMCAAIHVINLSPTAVLKGKVPEE 113
           KTPQ NG+AERMNRT++E+VRC+LS + LPRSFWGE +   +HV+NL+P   L+  VP+ 
Sbjct: 441 KTPQLNGLAERMNRTLVERVRCLLSQSQLPRSFWGEALNTVVHVLNLTPCVPLEFDVPDR 500

Query: 112 VCSGKERSYKHLRVFGCKVFVHIPKDERSKLDNKSR 5
           + S  E SY HLRVFGCK FVHIPKDERSKLD K+R
Sbjct: 501 IWSNNEISYDHLRVFGCKAFVHIPKDERSKLDAKTR 536


>emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera]
          Length = 1362

 Score =  135 bits (340), Expect = 3e-30
 Identities = 62/96 (64%), Positives = 76/96 (79%)
 Frame = -3

Query: 292 KTPQHNGIAERMNRTIIEKVRCMLSHACLPRSFWGEVMCAAIHVINLSPTAVLKGKVPEE 113
           KTPQ NG+AERMNRT++E+VRC+LS + LPRSFWGE +   +HV+NL+P   L+  VP+ 
Sbjct: 554 KTPQLNGLAERMNRTLVERVRCLLSQSQLPRSFWGEALNTIVHVLNLTPCVPLEFDVPDR 613

Query: 112 VCSGKERSYKHLRVFGCKVFVHIPKDERSKLDNKSR 5
           + S  E SY HLRVFGCK FVHIPKDERSKLD K+R
Sbjct: 614 IWSNNEISYDHLRVFGCKAFVHIPKDERSKLDAKTR 649


>emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera]
          Length = 1207

 Score =  135 bits (339), Expect = 5e-30
 Identities = 62/96 (64%), Positives = 76/96 (79%)
 Frame = -3

Query: 292 KTPQHNGIAERMNRTIIEKVRCMLSHACLPRSFWGEVMCAAIHVINLSPTAVLKGKVPEE 113
           KTPQ NG+AERMNRT++E+VRC+LS + LPRSFWGE +   +HV+NL+P   L+  VP+ 
Sbjct: 457 KTPQLNGLAERMNRTLVERVRCLLSQSQLPRSFWGEALNTVVHVLNLTPCVPLEFDVPDR 516

Query: 112 VCSGKERSYKHLRVFGCKVFVHIPKDERSKLDNKSR 5
           + S  E SY HLRVFGCK FVHIPKDERSKLD K+R
Sbjct: 517 IWSKNEISYDHLRVFGCKAFVHIPKDERSKLDAKTR 552


>emb|CAN59934.1| hypothetical protein VITISV_001876 [Vitis vinifera]
          Length = 1392

 Score =  134 bits (338), Expect = 6e-30
 Identities = 61/96 (63%), Positives = 76/96 (79%)
 Frame = -3

Query: 292 KTPQHNGIAERMNRTIIEKVRCMLSHACLPRSFWGEVMCAAIHVINLSPTAVLKGKVPEE 113
           KTPQ NG+AERMN T++E+VRC+LS + LPRSFWGE +   +HV+NL+P  +L+  VP+ 
Sbjct: 400 KTPQLNGLAERMNMTLVERVRCLLSQSQLPRSFWGEALNTVVHVLNLTPCVLLEFDVPDR 459

Query: 112 VCSGKERSYKHLRVFGCKVFVHIPKDERSKLDNKSR 5
           + S  E SY HLRVFGCK FVHIPKDERSKLD K+R
Sbjct: 460 IWSNNEISYDHLRVFGCKAFVHIPKDERSKLDAKTR 495


Top