BLASTX nr result

ID: Lithospermum22_contig00033286 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00033286
         (236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACJ86065.1| unknown [Medicago truncatula] gi|388494518|gb|AFK...    61   8e-08
ref|XP_002321288.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07
ref|XP_002301799.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07
ref|XP_002532746.1| RING finger protein, putative [Ricinus commu...    58   9e-07
gb|ACJ83847.1| unknown [Medicago truncatula]                           57   2e-06

>gb|ACJ86065.1| unknown [Medicago truncatula] gi|388494518|gb|AFK35325.1| unknown
           [Medicago truncatula]
          Length = 242

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 35/73 (47%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
 Frame = -1

Query: 224 QGVRVDQTNNQVGVPGPSTPIDLEAVDND-VIISSPRTFAEAKSNSRMNRGRPIVVDVEA 48
           Q V V     Q+      T ID+EA+D+D V++SSPR FAEAK+NSR NRGR  VVDV+ 
Sbjct: 72  QEVEVQANQLQLVAQPEPTLIDVEAIDDDDVVLSSPRAFAEAKNNSRRNRGR-TVVDVDL 130

Query: 47  GDWVAVKNNKRRR 9
            + + + NN R +
Sbjct: 131 EEQIRLSNNNRNK 143


>ref|XP_002321288.1| predicted protein [Populus trichocarpa] gi|222862061|gb|EEE99603.1|
           predicted protein [Populus trichocarpa]
          Length = 213

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 36/75 (48%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
 Frame = -1

Query: 224 QGVRVDQTNNQVGVPGPSTPIDLEAVDNDVIISSPRTFAEAKSNSRMNRGRPIVVDVEAG 45
           QGV+  Q    +    P   ID++  D+DVI SSP  FAEAK+NSR  RGR +VVDVE+G
Sbjct: 45  QGVQASQQGQSL----PPPTIDVDVFDDDVIESSPTAFAEAKNNSRRARGRAVVVDVESG 100

Query: 44  DWVAVKN---NKRRR 9
               + +   NKRRR
Sbjct: 101 RTSRLSHNNLNKRRR 115


>ref|XP_002301799.1| predicted protein [Populus trichocarpa] gi|222843525|gb|EEE81072.1|
           predicted protein [Populus trichocarpa]
          Length = 209

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 36/72 (50%), Positives = 46/72 (63%)
 Frame = -1

Query: 224 QGVRVDQTNNQVGVPGPSTPIDLEAVDNDVIISSPRTFAEAKSNSRMNRGRPIVVDVEAG 45
           QGV+     N  G   P   ID++A+D+DVI SSPR FA+AK+NSR    R +VVDVE+G
Sbjct: 47  QGVQASHQRNGQGPSLPPPTIDVDAIDDDVIESSPRAFAQAKNNSR----RALVVDVESG 102

Query: 44  DWVAVKNNKRRR 9
                 +NKRRR
Sbjct: 103 G--RFTHNKRRR 112


>ref|XP_002532746.1| RING finger protein, putative [Ricinus communis]
           gi|223527523|gb|EEF29648.1| RING finger protein,
           putative [Ricinus communis]
          Length = 224

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 36/88 (40%), Positives = 50/88 (56%), Gaps = 12/88 (13%)
 Frame = -1

Query: 236 TSTDQGVRVDQTNNQVGVPGPSTPIDLEAVDNDVIISSPRTFAEAKSNSRMN-------- 81
           TS+    R  QT  Q     P T ID+EA+++DV+ SSPR FAEAK+N++ N        
Sbjct: 38  TSSQDAHRGGQTTQQGQQSVPLTTIDVEALEDDVVESSPRAFAEAKNNAQRNNLQRNHAQ 97

Query: 80  --RGRPIVVDVEAG--DWVAVKNNKRRR 9
             RG  ++VDV++G    +    NKRRR
Sbjct: 98  RTRGSTVIVDVDSGRTTRLTYAQNKRRR 125


>gb|ACJ83847.1| unknown [Medicago truncatula]
          Length = 247

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 36/78 (46%), Positives = 48/78 (61%), Gaps = 6/78 (7%)
 Frame = -1

Query: 224 QGVRVDQTNNQVGVPGPSTPIDLEAVDND-VIISSPRTFAEAKSNSRMNRGRPIVVDVE- 51
           Q V V     Q+      T ID+EA+D+D V++SSPR FAEAK+NSR NRGR  VVDV+ 
Sbjct: 72  QEVEVQANQLQLVAQPEPTLIDVEAIDDDDVVLSSPRAFAEAKNNSRRNRGR-TVVDVDL 130

Query: 50  ----AGDWVAVKNNKRRR 9
               A + + + NN R +
Sbjct: 131 VMFFAEEQIRLSNNNRNK 148


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