BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00033208
         (489 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002883344.1| pentatricopeptide repeat-containing protein ...   136   2e-30
ref|XP_004167803.1| PREDICTED: pentatricopeptide repeat-containi...   136   2e-30
ref|NP_188854.1| pentatricopeptide repeat-containing protein [Ar...   133   1e-29
ref|XP_002308773.1| predicted protein [Populus trichocarpa] gi|2...   128   4e-28
ref|XP_004146067.1| PREDICTED: pentatricopeptide repeat-containi...   124   1e-26

>ref|XP_002883344.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297329184|gb|EFH59603.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 824

 Score =  136 bits (343), Expect = 2e-30
 Identities = 65/106 (61%), Positives = 82/106 (77%), Gaps = 1/106 (0%)
 Frame = +3

Query: 174 KTKTIRYRLSQLCKEGKIELAHHLFDTIPKPTTVLWNTIIIGFICNNLPEKAIHFYSKMK 353
           +T +IR RLS++C+EG  +LA  LFD IPKPTTVLWNTIIIGFICNNLP +A+ FYS+MK
Sbjct: 38  QTPSIRSRLSKICQEGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMK 97

Query: 354 HIST-NKCDPYTYSATLKACSETNRISVGKAVHGHIIRLEKFPSKI 488
             +   KCD YTYS+TLKAC+ET  +  GKAVH H+IR  +  S++
Sbjct: 98  KTAPFTKCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRV 143


>ref|XP_004167803.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic-like [Cucumis sativus]
          Length = 817

 Score =  136 bits (342), Expect = 2e-30
 Identities = 63/106 (59%), Positives = 80/106 (75%), Gaps = 1/106 (0%)
 Frame = +3

Query: 174 KTKTIRYRLSQLCKEGKIELAHHLFDTIPKPTTVLWNTIIIGFICNNLPEKAIHFYSKMK 353
           K  TIRYRLS+LC+EG++ LA  LFD +P+P+TVLWNTIIIG +CNN P++A+ FYS MK
Sbjct: 27  KIPTIRYRLSRLCQEGQLHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNMK 86

Query: 354 HISTN-KCDPYTYSATLKACSETNRISVGKAVHGHIIRLEKFPSKI 488
             S   KCD YTYS+ LKAC++T  + VGKAVH H +R    PS+I
Sbjct: 87  SSSPQVKCDSYTYSSVLKACADTRNLVVGKAVHAHFLRCLMNPSRI 132


>ref|NP_188854.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75273371|sp|Q9LIE7.1|PP246_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g22150, chloroplastic; Flags: Precursor
           gi|11994734|dbj|BAB03063.1| selenium-binding
           protein-like [Arabidopsis thaliana]
           gi|110739449|dbj|BAF01634.1| hypothetical protein
           [Arabidopsis thaliana] gi|332643073|gb|AEE76594.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 820

 Score =  133 bits (335), Expect = 1e-29
 Identities = 63/106 (59%), Positives = 81/106 (76%), Gaps = 1/106 (0%)
 Frame = +3

Query: 174 KTKTIRYRLSQLCKEGKIELAHHLFDTIPKPTTVLWNTIIIGFICNNLPEKAIHFYSKMK 353
           +T +IR RLS++C++G  +LA  LFD IPKPTTVLWNTIIIGFICNNLP +A+ FYS+MK
Sbjct: 38  QTPSIRSRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMK 97

Query: 354 HIST-NKCDPYTYSATLKACSETNRISVGKAVHGHIIRLEKFPSKI 488
             +    CD YTYS+TLKAC+ET  +  GKAVH H+IR  +  S++
Sbjct: 98  KTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRV 143


>ref|XP_002308773.1| predicted protein [Populus trichocarpa] gi|222854749|gb|EEE92296.1|
           predicted protein [Populus trichocarpa]
          Length = 465

 Score =  128 bits (322), Expect = 4e-28
 Identities = 64/106 (60%), Positives = 81/106 (76%), Gaps = 1/106 (0%)
 Frame = +3

Query: 174 KTKTIRYRLSQLCKEGKIELAHHLFDTIPKPTTVLWNTIIIGFICNNLPEKAIHFYSKMK 353
           KT +IR RLS+LC+EG+  +A  LFDT P+PTTV+ NTIIIGFICNNLP +AI FYSK+K
Sbjct: 41  KTPSIRSRLSKLCQEGQPHIALQLFDTFPRPTTVICNTIIIGFICNNLPLEAILFYSKLK 100

Query: 354 HIST-NKCDPYTYSATLKACSETNRISVGKAVHGHIIRLEKFPSKI 488
             S   K D YTYS+TLKAC+ET  + +G+A+H H+IR    PS+I
Sbjct: 101 SSSLGTKFDSYTYSSTLKACAETRSLKIGRAIHCHLIRCLSNPSRI 146


>ref|XP_004146067.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic-like [Cucumis sativus]
          Length = 793

 Score =  124 bits (310), Expect = 1e-26
 Identities = 56/100 (56%), Positives = 74/100 (74%), Gaps = 1/100 (1%)
 Frame = +3

Query: 192 YRLSQLCKEGKIELAHHLFDTIPKPTTVLWNTIIIGFICNNLPEKAIHFYSKMKHISTN- 368
           + L +LC+EG++ LA  LFD +P+P+TVLWNTIIIG +CNN P++A+ FYS MK  S   
Sbjct: 9   HELCRLCQEGQLHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNMKSSSPQV 68

Query: 369 KCDPYTYSATLKACSETNRISVGKAVHGHIIRLEKFPSKI 488
           KCD YTYS+ LKAC++T  + VGKAVH H +R    PS+I
Sbjct: 69  KCDSYTYSSVLKACADTRNLVVGKAVHAHFLRCLMNPSRI 108