BLASTX nr result

ID: Lithospermum22_contig00033193 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00033193
         (717 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD83475.2| ribosomal protein L16, partial (mitochondrion) [...   246   3e-63
ref|YP_005090456.1| ribosomal protein L16 (mitochondrion) [Mille...   245   6e-63
ref|YP_005090475.1| ribosomal protein L16 (mitochondrion) [Lotus...   245   6e-63
sp|Q95747.3|RM16_ARATH RecName: Full=60S ribosomal protein L16, ...   243   4e-62
ref|YP_006460180.1| ribosomal protein subunit L16, partial (mito...   241   1e-61

>dbj|BAD83475.2| ribosomal protein L16, partial (mitochondrion) [Nicotiana tabacum]
          Length = 158

 Score =  246 bits (629), Expect = 3e-63
 Identities = 120/136 (88%), Positives = 123/136 (90%)
 Frame = -2

Query: 716 FSKYCKGRCSRGCKPDGTQLGFGRYGIKSCRAGRLSYXXXXXXXXXXIGHFHRAMSGQFR 537
           +SKY KGRCSRGCKPDGTQLGFGRYGIKSCRAGRLSY          IGHFHRAMSGQFR
Sbjct: 23  YSKYRKGRCSRGCKPDGTQLGFGRYGIKSCRAGRLSYRAIEAARRAIIGHFHRAMSGQFR 82

Query: 536 RNGKIWVRVFADLPITGKPTEVRMGRGKGNPTGWVARVSTGQILFEMDGVSLSNARQAAT 357
           RNGKIWVRVFAD+PITGKPTEVRMGRGKGNPTGW+ARVS GQILFEMDGVSLSNARQAAT
Sbjct: 83  RNGKIWVRVFADIPITGKPTEVRMGRGKGNPTGWIARVSRGQILFEMDGVSLSNARQAAT 142

Query: 356 LAAHKLCLSTKFVQSS 309
           LAAHKLCLSTKFVQ S
Sbjct: 143 LAAHKLCLSTKFVQWS 158


>ref|YP_005090456.1| ribosomal protein L16 (mitochondrion) [Millettia pinnata]
           gi|358748147|gb|AET62916.1| ribosomal protein L16
           (mitochondrion) [Millettia pinnata]
          Length = 185

 Score =  245 bits (626), Expect = 6e-63
 Identities = 118/136 (86%), Positives = 124/136 (91%)
 Frame = -2

Query: 716 FSKYCKGRCSRGCKPDGTQLGFGRYGIKSCRAGRLSYXXXXXXXXXXIGHFHRAMSGQFR 537
           FSKY KGRCSRGCKPDGT+LGFGRYGI+SCRAGRLSY          IGHFHRAMSGQFR
Sbjct: 50  FSKYRKGRCSRGCKPDGTKLGFGRYGIQSCRAGRLSYRAIEAARRAIIGHFHRAMSGQFR 109

Query: 536 RNGKIWVRVFADLPITGKPTEVRMGRGKGNPTGWVARVSTGQILFEMDGVSLSNARQAAT 357
           +NGKIWVRVFAD+PITGKPTEVRMGRGKGNPTGW+ARVSTGQ+LFEMDGVSLSNARQAAT
Sbjct: 110 KNGKIWVRVFADIPITGKPTEVRMGRGKGNPTGWIARVSTGQVLFEMDGVSLSNARQAAT 169

Query: 356 LAAHKLCLSTKFVQSS 309
           LAAHKLCLSTKFVQ S
Sbjct: 170 LAAHKLCLSTKFVQWS 185


>ref|YP_005090475.1| ribosomal protein L16 (mitochondrion) [Lotus japonicus]
           gi|358748144|gb|AET62935.1| ribosomal protein L16
           (mitochondrion) [Lotus japonicus]
          Length = 185

 Score =  245 bits (626), Expect = 6e-63
 Identities = 118/136 (86%), Positives = 124/136 (91%)
 Frame = -2

Query: 716 FSKYCKGRCSRGCKPDGTQLGFGRYGIKSCRAGRLSYXXXXXXXXXXIGHFHRAMSGQFR 537
           FSKY KGRCSRGCKPDGT+LGFGRYGI+SCRAGRLSY          IGHFHRAMSGQFR
Sbjct: 50  FSKYRKGRCSRGCKPDGTKLGFGRYGIQSCRAGRLSYRAIEAARRAIIGHFHRAMSGQFR 109

Query: 536 RNGKIWVRVFADLPITGKPTEVRMGRGKGNPTGWVARVSTGQILFEMDGVSLSNARQAAT 357
           +NGKIWVRVFAD+PITGKPTEVRMGRGKGNPTGW+ARVSTGQ+LFEMDGVSLSNARQAAT
Sbjct: 110 KNGKIWVRVFADIPITGKPTEVRMGRGKGNPTGWIARVSTGQVLFEMDGVSLSNARQAAT 169

Query: 356 LAAHKLCLSTKFVQSS 309
           LAAHKLCLSTKFVQ S
Sbjct: 170 LAAHKLCLSTKFVQWS 185


>sp|Q95747.3|RM16_ARATH RecName: Full=60S ribosomal protein L16, mitochondrial
          Length = 179

 Score =  243 bits (619), Expect = 4e-62
 Identities = 118/136 (86%), Positives = 123/136 (90%)
 Frame = -2

Query: 716 FSKYCKGRCSRGCKPDGTQLGFGRYGIKSCRAGRLSYXXXXXXXXXXIGHFHRAMSGQFR 537
           +SKY KGRCSRGCKPDGT+LGFGRYGIKSC+AG LSY          IGHFHRAMSGQFR
Sbjct: 44  YSKYRKGRCSRGCKPDGTKLGFGRYGIKSCKAGCLSYRAIEAARRAIIGHFHRAMSGQFR 103

Query: 536 RNGKIWVRVFADLPITGKPTEVRMGRGKGNPTGWVARVSTGQILFEMDGVSLSNARQAAT 357
           RNGKIWVRVFADLPITGKPTEVRMGRGKGNPTGW+ARVSTGQILFEMDGVSL+NARQAAT
Sbjct: 104 RNGKIWVRVFADLPITGKPTEVRMGRGKGNPTGWIARVSTGQILFEMDGVSLANARQAAT 163

Query: 356 LAAHKLCLSTKFVQSS 309
           LAAHKLCLSTKFVQ S
Sbjct: 164 LAAHKLCLSTKFVQWS 179


>ref|YP_006460180.1| ribosomal protein subunit L16, partial (mitochondrion) [Mimulus
           guttatus] gi|391348939|ref|YP_006460187.1| ribosomal
           protein subunit L16, partial (mitochondrion) [Mimulus
           guttatus] gi|340007663|gb|AEK26527.1| ribosomal protein
           subunit L16, partial (mitochondrion) [Mimulus guttatus]
           gi|340007664|gb|AEK26528.1| ribosomal protein subunit
           L16, partial (mitochondrion) [Mimulus guttatus]
          Length = 158

 Score =  241 bits (614), Expect = 1e-61
 Identities = 117/136 (86%), Positives = 121/136 (88%)
 Frame = -2

Query: 716 FSKYCKGRCSRGCKPDGTQLGFGRYGIKSCRAGRLSYXXXXXXXXXXIGHFHRAMSGQFR 537
           +SKY KGRCSRGCKPDGTQLGFGRYG KSCRAGRLSY          IGHFHRAMSGQFR
Sbjct: 23  YSKYRKGRCSRGCKPDGTQLGFGRYGTKSCRAGRLSYRAIEAARRAIIGHFHRAMSGQFR 82

Query: 536 RNGKIWVRVFADLPITGKPTEVRMGRGKGNPTGWVARVSTGQILFEMDGVSLSNARQAAT 357
           RNGKIWVRV AD+PITGKPTEVRMGRGKGNPTGW+ARVSTGQILFEMDGVSLSNA+QAAT
Sbjct: 83  RNGKIWVRVLADIPITGKPTEVRMGRGKGNPTGWIARVSTGQILFEMDGVSLSNAQQAAT 142

Query: 356 LAAHKLCLSTKFVQSS 309
           LAAHKLC STKFVQ S
Sbjct: 143 LAAHKLCSSTKFVQWS 158


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