BLASTX nr result

ID: Lithospermum22_contig00033169 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00033169
         (194 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB47203.2| retrotransposon protein, putative, unclassified [...    80   2e-13
gb|AAM74347.1|AC115686_14 Putative retroelement [Oryza sativa Ja...    80   2e-13
gb|AAN34944.1| Putative retroelement [Oryza sativa Japonica Group]     80   2e-13
gb|AAT93988.1| putative polyprotein [Oryza sativa Japonica Group]      78   9e-13
ref|NP_001061315.2| Os08g0236200 [Oryza sativa Japonica Group] g...    77   2e-12

>gb|ABB47203.2| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1050

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 36/63 (57%), Positives = 45/63 (71%)
 Frame = +3

Query: 6   DNNVSIEFDPFGFSVKDFRTGTSLMRCDSKGELYPITSTRPFPSQHNFSAFTSTLWHARL 185
           DNN SIEFD FGFSVK  RT   ++RC+S+G+LY +    P  + H+F A +STLWH RL
Sbjct: 359 DNNCSIEFDEFGFSVKGLRTRRVILRCNSRGDLYTLPIAAPAIAAHSFLAQSSTLWHRRL 418

Query: 186 GHP 194
           GHP
Sbjct: 419 GHP 421


>gb|AAM74347.1|AC115686_14 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1250

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 36/63 (57%), Positives = 45/63 (71%)
 Frame = +3

Query: 6   DNNVSIEFDPFGFSVKDFRTGTSLMRCDSKGELYPITSTRPFPSQHNFSAFTSTLWHARL 185
           DNN SIEFD FGFSVK  RT   ++RC+S+G+LY +    P  + H+F A +STLWH RL
Sbjct: 436 DNNCSIEFDEFGFSVKGLRTRRVILRCNSRGDLYTLPIAAPAIAAHSFLAQSSTLWHRRL 495

Query: 186 GHP 194
           GHP
Sbjct: 496 GHP 498


>gb|AAN34944.1| Putative retroelement [Oryza sativa Japonica Group]
          Length = 1146

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 36/63 (57%), Positives = 45/63 (71%)
 Frame = +3

Query: 6   DNNVSIEFDPFGFSVKDFRTGTSLMRCDSKGELYPITSTRPFPSQHNFSAFTSTLWHARL 185
           DNN SIEFD FGFSVK  RT   ++RC+S+G+LY +    P  + H+F A +STLWH RL
Sbjct: 455 DNNCSIEFDEFGFSVKGLRTRRVILRCNSRGDLYTLPIAAPAIAAHSFLAQSSTLWHRRL 514

Query: 186 GHP 194
           GHP
Sbjct: 515 GHP 517


>gb|AAT93988.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1480

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 35/63 (55%), Positives = 45/63 (71%)
 Frame = +3

Query: 6   DNNVSIEFDPFGFSVKDFRTGTSLMRCDSKGELYPITSTRPFPSQHNFSAFTSTLWHARL 185
           DN  S EFD FGFSVKD  T   ++RC+S+G+LY + +T P  + H+F A +STLWH RL
Sbjct: 435 DNKCSFEFDEFGFSVKDLPTRRVILRCNSRGDLYTLPTTVPAITAHSFLAKSSTLWHHRL 494

Query: 186 GHP 194
           GHP
Sbjct: 495 GHP 497


>ref|NP_001061315.2| Os08g0236200 [Oryza sativa Japonica Group]
           gi|255678262|dbj|BAF23229.2| Os08g0236200 [Oryza sativa
           Japonica Group]
          Length = 624

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 34/63 (53%), Positives = 45/63 (71%)
 Frame = +3

Query: 6   DNNVSIEFDPFGFSVKDFRTGTSLMRCDSKGELYPITSTRPFPSQHNFSAFTSTLWHARL 185
           DN  SIEFD FGF VKD +T   ++RC+S+G+LY + +  P  + H+F A +STLWH RL
Sbjct: 135 DNKCSIEFDEFGFFVKDLQTQRVILRCNSRGDLYTLPTAVPAITAHSFLAESSTLWHRRL 194

Query: 186 GHP 194
           GHP
Sbjct: 195 GHP 197


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