BLASTX nr result

ID: Lithospermum22_contig00033158 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00033158
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACG27529.1| splicing factor, arginine/serine-rich 7 [Zea mays...    57   1e-06
ref|XP_002440494.1| hypothetical protein SORBIDRAFT_09g001910 [S...    57   2e-06
gb|ACN36972.1| unknown [Zea mays] gi|413950156|gb|AFW82805.1| sp...    57   2e-06
ref|NP_001143694.1| uncharacterized protein LOC100276428 [Zea ma...    57   2e-06
ref|XP_003554343.1| PREDICTED: uncharacterized protein LOC100789...    57   2e-06

>gb|ACG27529.1| splicing factor, arginine/serine-rich 7 [Zea mays]
           gi|223973611|gb|ACN30993.1| unknown [Zea mays]
           gi|413942175|gb|AFW74824.1| Splicing factor,
           arginine/serine-rich 7 isoform 1 [Zea mays]
           gi|413942176|gb|AFW74825.1| Splicing factor,
           arginine/serine-rich 7 isoform 2 [Zea mays]
           gi|448878178|gb|AGE46052.1| arginine/serine-rich
           splicing factor RS2Z37B transcript I [Zea mays]
          Length = 333

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 25/35 (71%), Positives = 32/35 (91%)
 Frame = +1

Query: 1   DFSHYRDADDARHRLDGREVDGRRIIVEFAKGVSR 105
           +FS +RDAD+AR++LDGR+VDG RI+VEFAKGV R
Sbjct: 50  EFSEHRDADEARYQLDGRDVDGSRIVVEFAKGVPR 84


>ref|XP_002440494.1| hypothetical protein SORBIDRAFT_09g001910 [Sorghum bicolor]
           gi|241945779|gb|EES18924.1| hypothetical protein
           SORBIDRAFT_09g001910 [Sorghum bicolor]
           gi|448878296|gb|AGE46111.1| arginine/serine-rich
           splicing factor RS2Z39 [Sorghum bicolor]
          Length = 341

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 25/35 (71%), Positives = 32/35 (91%)
 Frame = +1

Query: 1   DFSHYRDADDARHRLDGREVDGRRIIVEFAKGVSR 105
           +FS +RDAD+AR++LDGR+VDG RI+VEFAKGV R
Sbjct: 50  EFSDHRDADEARYQLDGRDVDGSRIVVEFAKGVPR 84


>gb|ACN36972.1| unknown [Zea mays] gi|413950156|gb|AFW82805.1| splicing factor,
           arginine/serine-rich 6 [Zea mays]
           gi|448878164|gb|AGE46045.1| arginine/serine-rich
           splicing factor RS2Z39 transcript III [Zea mays]
           gi|448878166|gb|AGE46046.1| arginine/serine-rich
           splicing factor RS2Z39 transcript IV [Zea mays]
          Length = 353

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 25/35 (71%), Positives = 32/35 (91%)
 Frame = +1

Query: 1   DFSHYRDADDARHRLDGREVDGRRIIVEFAKGVSR 105
           +FS +RDAD+AR++LDGR+VDG RI+VEFAKGV R
Sbjct: 50  EFSDHRDADEARYQLDGRDVDGSRIVVEFAKGVPR 84


>ref|NP_001143694.1| uncharacterized protein LOC100276428 [Zea mays]
           gi|195620112|gb|ACG31886.1| splicing factor,
           arginine/serine-rich 6 [Zea mays]
           gi|448878170|gb|AGE46048.1| arginine/serine-rich
           splicing factor RS2Z39 transcript VI [Zea mays]
          Length = 353

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 25/35 (71%), Positives = 32/35 (91%)
 Frame = +1

Query: 1   DFSHYRDADDARHRLDGREVDGRRIIVEFAKGVSR 105
           +FS +RDAD+AR++LDGR+VDG RI+VEFAKGV R
Sbjct: 50  EFSDHRDADEARYQLDGRDVDGSRIVVEFAKGVPR 84


>ref|XP_003554343.1| PREDICTED: uncharacterized protein LOC100789862 [Glycine max]
          Length = 287

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 27/35 (77%), Positives = 29/35 (82%)
 Frame = +1

Query: 1   DFSHYRDADDARHRLDGREVDGRRIIVEFAKGVSR 105
           DFS  RDADDAR+ LDGR+VDG RIIVEFAKG  R
Sbjct: 50  DFSDPRDADDARYNLDGRDVDGSRIIVEFAKGAPR 84


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