BLASTX nr result

ID: Lithospermum22_contig00033155 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00033155
         (769 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305823.1| predicted protein [Populus trichocarpa] gi|2...   327   2e-87
ref|XP_004145630.1| PREDICTED: chloroplastic group IIB intron sp...   315   9e-84
ref|XP_002516738.1| peptidyl-tRNA hydrolase, putative [Ricinus c...   314   2e-83
ref|XP_002284030.1| PREDICTED: chloroplastic group IIB intron sp...   313   3e-83
gb|AFK38602.1| unknown [Lotus japonicus]                              310   3e-82

>ref|XP_002305823.1| predicted protein [Populus trichocarpa] gi|222848787|gb|EEE86334.1|
           predicted protein [Populus trichocarpa]
          Length = 244

 Score =  327 bits (837), Expect = 2e-87
 Identities = 149/182 (81%), Positives = 174/182 (95%)
 Frame = -3

Query: 767 HGTRHNVGFEMIDRISEAEGIVMNTIQSKSLIGIGSIGDVPLLLAKPQAYMNFSGEAVGP 588
           HGTRHNVGFEMIDRI++AEG++MNTIQSK+LIGIG IG+VP+LLAKPQAYMNFSGE+VGP
Sbjct: 63  HGTRHNVGFEMIDRIAQAEGVLMNTIQSKALIGIGCIGEVPILLAKPQAYMNFSGESVGP 122

Query: 587 LAAYYQVPLRHILLVYDEMSLPNGVLRIQPKGGHGHHNGVKSVIEHLDGCREFPRFCIGI 408
           LAA+Y++PLRHILL+YDEM+LPNG+LR+QPKGGHGHHNGVKSV++HLDGCREFPR CIGI
Sbjct: 123 LAAHYKIPLRHILLIYDEMNLPNGILRVQPKGGHGHHNGVKSVMDHLDGCREFPRLCIGI 182

Query: 407 GNPPGTMDFKAFLLQKFSVVERQQIDGALEQGVDAVRTLVLDGFSKRITRFNLGQKYKYN 228
           GNPPGTMD KAFLLQKFS  ER+QID +LEQGV+A+RTL+L GF+ +ITRFNLGQKYKY+
Sbjct: 183 GNPPGTMDMKAFLLQKFSPTEREQIDASLEQGVEAMRTLILGGFTNKITRFNLGQKYKYH 242

Query: 227 KV 222
           KV
Sbjct: 243 KV 244


>ref|XP_004145630.1| PREDICTED: chloroplastic group IIB intron splicing facilitator
           CRS2-B, chloroplastic-like [Cucumis sativus]
           gi|449519774|ref|XP_004166909.1| PREDICTED:
           chloroplastic group IIB intron splicing facilitator
           CRS2-B, chloroplastic-like [Cucumis sativus]
          Length = 249

 Score =  315 bits (806), Expect = 9e-84
 Identities = 148/182 (81%), Positives = 168/182 (92%)
 Frame = -3

Query: 767 HGTRHNVGFEMIDRISEAEGIVMNTIQSKSLIGIGSIGDVPLLLAKPQAYMNFSGEAVGP 588
           HGTRHNVGFEMID I++A+GI+MNTIQSK+LIGIGSIG+VP+LLAKPQ YMNF GE+VGP
Sbjct: 68  HGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGP 127

Query: 587 LAAYYQVPLRHILLVYDEMSLPNGVLRIQPKGGHGHHNGVKSVIEHLDGCREFPRFCIGI 408
           LAA+YQ+PLRH+LL YDEM+LPNGVLR+QPK GHGHHNGVKSV+ HLDG REFPR CIGI
Sbjct: 128 LAAHYQIPLRHVLLTYDEMNLPNGVLRLQPKAGHGHHNGVKSVMGHLDGRREFPRLCIGI 187

Query: 407 GNPPGTMDFKAFLLQKFSVVERQQIDGALEQGVDAVRTLVLDGFSKRITRFNLGQKYKYN 228
           GNPPGTMD KAFLLQKFS VER+QID ALEQGV+AVRTL L+GFS+R+ RFNL QKYKY+
Sbjct: 188 GNPPGTMDMKAFLLQKFSSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNLSQKYKYH 247

Query: 227 KV 222
           KV
Sbjct: 248 KV 249


>ref|XP_002516738.1| peptidyl-tRNA hydrolase, putative [Ricinus communis]
           gi|223544111|gb|EEF45636.1| peptidyl-tRNA hydrolase,
           putative [Ricinus communis]
          Length = 253

 Score =  314 bits (804), Expect = 2e-83
 Identities = 150/190 (78%), Positives = 169/190 (88%), Gaps = 8/190 (4%)
 Frame = -3

Query: 767 HGTRHNV--------GFEMIDRISEAEGIVMNTIQSKSLIGIGSIGDVPLLLAKPQAYMN 612
           HGTRHNV        GFEMID+I++AE + MNTIQSK+LIGIG I +VP+LL KPQAYMN
Sbjct: 64  HGTRHNVTNASLDLVGFEMIDKIAKAEAVAMNTIQSKALIGIGCIKEVPILLVKPQAYMN 123

Query: 611 FSGEAVGPLAAYYQVPLRHILLVYDEMSLPNGVLRIQPKGGHGHHNGVKSVIEHLDGCRE 432
           FSGE+VGPLAA+YQVPLRHILL+YDEMSLPNGV+R+QPKGGHGHHNGVKSV+EHLDGCRE
Sbjct: 124 FSGESVGPLAAHYQVPLRHILLIYDEMSLPNGVMRLQPKGGHGHHNGVKSVMEHLDGCRE 183

Query: 431 FPRFCIGIGNPPGTMDFKAFLLQKFSVVERQQIDGALEQGVDAVRTLVLDGFSKRITRFN 252
           FPR CIGIGNPPGTMD +AFLLQKFS  ER+QID AL QG+DAVRTLVL GF++ ITRFN
Sbjct: 184 FPRLCIGIGNPPGTMDMRAFLLQKFSSTEREQIDAALGQGIDAVRTLVLSGFNQNITRFN 243

Query: 251 LGQKYKYNKV 222
           LGQKYKY+KV
Sbjct: 244 LGQKYKYHKV 253


>ref|XP_002284030.1| PREDICTED: chloroplastic group IIB intron splicing facilitator
           CRS2, chloroplastic [Vitis vinifera]
           gi|296087264|emb|CBI33638.3| unnamed protein product
           [Vitis vinifera]
          Length = 246

 Score =  313 bits (801), Expect = 3e-83
 Identities = 147/182 (80%), Positives = 168/182 (92%)
 Frame = -3

Query: 767 HGTRHNVGFEMIDRISEAEGIVMNTIQSKSLIGIGSIGDVPLLLAKPQAYMNFSGEAVGP 588
           HGTRHNVGFEMIDRIS+ EGI++NTIQSK+LIGIGSIG+VP+LLAKPQAYMNFSGE+VGP
Sbjct: 65  HGTRHNVGFEMIDRISQEEGILLNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGP 124

Query: 587 LAAYYQVPLRHILLVYDEMSLPNGVLRIQPKGGHGHHNGVKSVIEHLDGCREFPRFCIGI 408
           LAAYYQVPLRHIL+VYDEM+LPNGVLR+ P+GGHG+HNG+K+V+ HLDGCREFPR CIGI
Sbjct: 125 LAAYYQVPLRHILVVYDEMNLPNGVLRLAPRGGHGYHNGLKNVMGHLDGCREFPRLCIGI 184

Query: 407 GNPPGTMDFKAFLLQKFSVVERQQIDGALEQGVDAVRTLVLDGFSKRITRFNLGQKYKYN 228
           GNPPGTMD KA+LLQKFS  ER+QID A EQG+ AVR LVL+GF+   TRFNLGQKYKY+
Sbjct: 185 GNPPGTMDMKAYLLQKFSFEERKQIDAAQEQGIGAVRNLVLNGFNHSTTRFNLGQKYKYH 244

Query: 227 KV 222
           KV
Sbjct: 245 KV 246


>gb|AFK38602.1| unknown [Lotus japonicus]
          Length = 247

 Score =  310 bits (793), Expect = 3e-82
 Identities = 146/182 (80%), Positives = 167/182 (91%)
 Frame = -3

Query: 767 HGTRHNVGFEMIDRISEAEGIVMNTIQSKSLIGIGSIGDVPLLLAKPQAYMNFSGEAVGP 588
           HGTRHNVGFE+ID +S AEGI+MNTIQSK+LIG+GSIGDVP+LLAKPQ YMNFSGEAVGP
Sbjct: 66  HGTRHNVGFEIIDSLSRAEGILMNTIQSKALIGLGSIGDVPVLLAKPQTYMNFSGEAVGP 125

Query: 587 LAAYYQVPLRHILLVYDEMSLPNGVLRIQPKGGHGHHNGVKSVIEHLDGCREFPRFCIGI 408
           LAAYY++PLRHI+LVYDE SLPNGVLR+QPKGGHGHHNG K+V+ HLDG R+FPR  IGI
Sbjct: 126 LAAYYRIPLRHIILVYDETSLPNGVLRLQPKGGHGHHNGSKNVMGHLDGSRDFPRLAIGI 185

Query: 407 GNPPGTMDFKAFLLQKFSVVERQQIDGALEQGVDAVRTLVLDGFSKRITRFNLGQKYKYN 228
           GNPPG+MD +AFLLQKFS VERQQID +LEQGV A+RTLVL GFS+ ++RFNLGQKYKY+
Sbjct: 186 GNPPGSMDSRAFLLQKFSSVERQQIDDSLEQGVQAIRTLVLHGFSQHVSRFNLGQKYKYH 245

Query: 227 KV 222
           KV
Sbjct: 246 KV 247


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