BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00033064
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_193587.4| pentatricopeptide repeat-containing protein [Ar...   155   2e-36
ref|XP_002867987.1| binding protein [Arabidopsis lyrata subsp. l...   155   3e-36
ref|XP_002513855.1| pentatricopeptide repeat-containing protein,...   154   7e-36
ref|XP_002284293.1| PREDICTED: pentatricopeptide repeat-containi...   149   2e-34
ref|XP_003556682.1| PREDICTED: pentatricopeptide repeat-containi...   147   7e-34

>ref|NP_193587.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|122236144|sp|Q0WNP3.1|PP319_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g18520 gi|110738662|dbj|BAF01256.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332658657|gb|AEE84057.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 617

 Score =  155 bits (393), Expect = 2e-36
 Identities = 73/107 (68%), Positives = 87/107 (81%)
 Frame = -2

Query: 324 LFRLMKRRKIYTNGLTVVSILRACGLLRSLATGKELHAQIIKGNVQSNIYIASSLVWLYC 145
           LFR+MKRR +  N LTVVSILRACG + +L  GKELHAQIIK +++ N+YI S+LVWLYC
Sbjct: 372 LFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYC 431

Query: 144 KCGEYSTAFNILQDMSFRDVVSWTAMISGCADLGHEYEALGYLKEML 4
           KCGE   AFN+LQ +  RDVVSWTAMISGC+ LGHE EAL +LKEM+
Sbjct: 432 KCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMI 478



 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 35/97 (36%), Positives = 54/97 (55%)
 Frame = -2

Query: 294 YTNGLTVVSILRACGLLRSLATGKELHAQIIKGNVQSNIYIASSLVWLYCKCGEYSTAFN 115
           +TN    V +L  C        G+++H  ++K  V  N+ + SSLV+ Y +CGE ++A  
Sbjct: 181 FTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGV-GNLIVESSLVYFYAQCGELTSALR 239

Query: 114 ILQDMSFRDVVSWTAMISGCADLGHEYEALGYLKEML 4
               M  +DV+SWTA+IS C+  GH  +A+G    ML
Sbjct: 240 AFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGML 276



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 32/94 (34%), Positives = 59/94 (62%)
 Frame = -2

Query: 288 NGLTVVSILRACGLLRSLATGKELHAQIIKGNVQSNIYIASSLVWLYCKCGEYSTAFNIL 109
           N  TV SIL+AC   ++L  G+++H+ ++K  +++++++ +SL+ +Y KCGE S    + 
Sbjct: 283 NEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVF 342

Query: 108 QDMSFRDVVSWTAMISGCADLGHEYEALGYLKEM 7
             MS R+ V+WT++I+  A  G   EA+   + M
Sbjct: 343 DGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIM 376



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 37/102 (36%), Positives = 55/102 (53%)
 Frame = -2

Query: 312 MKRRKIYTNGLTVVSILRACGLLRSLATGKELHAQIIKGNVQSNIYIASSLVWLYCKCGE 133
           M +  +  N  T  S L+AC    SL  G+ +H+   K +  SN+++ S+L+ +Y KCG 
Sbjct: 477 MIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGF 536

Query: 132 YSTAFNILQDMSFRDVVSWTAMISGCADLGHEYEALGYLKEM 7
            S AF +   M  +++VSW AMI G A  G   EAL  +  M
Sbjct: 537 VSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRM 578


>ref|XP_002867987.1| binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297313823|gb|EFH44246.1| binding protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 616

 Score =  155 bits (392), Expect = 3e-36
 Identities = 73/107 (68%), Positives = 87/107 (81%)
 Frame = -2

Query: 324 LFRLMKRRKIYTNGLTVVSILRACGLLRSLATGKELHAQIIKGNVQSNIYIASSLVWLYC 145
           LFR+MKRR +  N LTVVSILRACG + +L  GKELHAQIIK +++ N+YI S+LVWLYC
Sbjct: 372 LFRVMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYC 431

Query: 144 KCGEYSTAFNILQDMSFRDVVSWTAMISGCADLGHEYEALGYLKEML 4
           KCGE   AFN+LQ +  RDVVSWTAMISGC+ LGHE EAL +LKEM+
Sbjct: 432 KCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMI 478



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 31/94 (32%), Positives = 59/94 (62%)
 Frame = -2

Query: 288 NGLTVVSILRACGLLRSLATGKELHAQIIKGNVQSNIYIASSLVWLYCKCGEYSTAFNIL 109
           N  TV SIL+AC   +++  G+++H+ ++K  +++++++ +SL+ +Y KCGE S    + 
Sbjct: 283 NEFTVCSILKACSEEKAIRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVF 342

Query: 108 QDMSFRDVVSWTAMISGCADLGHEYEALGYLKEM 7
             MS R+ V+WT++I+  A  G   EA+   + M
Sbjct: 343 DGMSNRNTVTWTSIIAAHAREGFGEEAISLFRVM 376



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 37/102 (36%), Positives = 55/102 (53%)
 Frame = -2

Query: 312 MKRRKIYTNGLTVVSILRACGLLRSLATGKELHAQIIKGNVQSNIYIASSLVWLYCKCGE 133
           M +  +  N  T  S L+AC    SL  G+ +H+   K +  SN+++ S+L+ +Y KCG 
Sbjct: 477 MIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGF 536

Query: 132 YSTAFNILQDMSFRDVVSWTAMISGCADLGHEYEALGYLKEM 7
            S AF +   M  +++VSW AMI G A  G   EAL  +  M
Sbjct: 537 VSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRM 578



 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 32/90 (35%), Positives = 51/90 (56%)
 Frame = -2

Query: 294 YTNGLTVVSILRACGLLRSLATGKELHAQIIKGNVQSNIYIASSLVWLYCKCGEYSTAFN 115
           +TN    V +L  C        G+++H  ++K  V  N+ + SSLV+ Y +CGE ++A  
Sbjct: 181 FTNERMFVCLLNLCSRRSEFELGRQVHGNMVKVGV-GNLIVESSLVYFYAQCGELTSALR 239

Query: 114 ILQDMSFRDVVSWTAMISGCADLGHEYEAL 25
               M  +DV+SWTA+IS C+  GH  +A+
Sbjct: 240 AFDMMEEKDVISWTAVISACSRKGHGNKAI 269


>ref|XP_002513855.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223546941|gb|EEF48438.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 498

 Score =  154 bits (389), Expect = 7e-36
 Identities = 71/108 (65%), Positives = 90/108 (83%)
 Frame = -2

Query: 327 RLFRLMKRRKIYTNGLTVVSILRACGLLRSLATGKELHAQIIKGNVQSNIYIASSLVWLY 148
           RLFR+MKRRKI +N LTVVS+LRACG + +  TG+E+HAQIIK  +QSN+Y+ S+LVW Y
Sbjct: 254 RLFRVMKRRKIISNNLTVVSVLRACGSISASLTGREVHAQIIKSGIQSNVYLGSTLVWFY 313

Query: 147 CKCGEYSTAFNILQDMSFRDVVSWTAMISGCADLGHEYEALGYLKEML 4
           CKCGE++ A  +LQ MSFR+VVSWTAMISG   LG+E+EAL +LKEM+
Sbjct: 314 CKCGEFNIASKVLQQMSFRNVVSWTAMISGYIGLGYEFEALEFLKEMM 361



 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 39/107 (36%), Positives = 62/107 (57%)
 Frame = -2

Query: 327 RLFRLMKRRKIYTNGLTVVSILRACGLLRSLATGKELHAQIIKGNVQSNIYIASSLVWLY 148
           R+F  M       N  TV +IL+ACG  ++L  G++LH  I+KG  + +++I +SLV +Y
Sbjct: 153 RMFSQMLGEGFLPNEFTVCAILKACGEKKALKFGRQLHCAIVKGMYKDDVFIGTSLVDMY 212

Query: 147 CKCGEYSTAFNILQDMSFRDVVSWTAMISGCADLGHEYEALGYLKEM 7
            KCGE   +  +   M  R+ V+WT++I+G A  G   EA+   + M
Sbjct: 213 AKCGEMIDSKEVFDGMRKRNTVTWTSIIAGYARKGLGEEAIRLFRVM 259



 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 37/109 (33%), Positives = 58/109 (53%)
 Frame = -2

Query: 327 RLFRLMKRRKIYTNGLTVVSILRACGLLRSLATGKELHAQIIKGNVQSNIYIASSLVWLY 148
           RLF  +    +  N  T V IL  C        G+++HA ++KGN + N+ + S++V  Y
Sbjct: 53  RLFSELIENGVTANNRTFVCILNVCSKRLDFELGRQIHACVVKGNWR-NLIVDSAIVSFY 111

Query: 147 CKCGEYSTAFNILQDMSFRDVVSWTAMISGCADLGHEYEALGYLKEMLG 1
            +CG+  +AF     +  +DVV WT++IS C+  G   EA     +MLG
Sbjct: 112 AQCGDLESAFCAFFQVREKDVVCWTSVISACSQQGRGEEAFRMFSQMLG 160



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 35/94 (37%), Positives = 50/94 (53%)
 Frame = -2

Query: 288 NGLTVVSILRACGLLRSLATGKELHAQIIKGNVQSNIYIASSLVWLYCKCGEYSTAFNIL 109
           N  T  S L+AC  L S+  GK +H+   K    SN+Y+ S+L+++Y KCG  S A  + 
Sbjct: 368 NEFTYSSALKACANLESVLQGKLIHSFANKTPASSNVYVGSALIYMYSKCGYLSDAIQVF 427

Query: 108 QDMSFRDVVSWTAMISGCADLGHEYEALGYLKEM 7
             M  R+++SW  MI   A  G   EAL  +  M
Sbjct: 428 DSMPERNLISWKTMILSYARNGLCREALKLMYRM 461


>ref|XP_002284293.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g18520-like [Vitis vinifera]
          Length = 595

 Score =  149 bits (376), Expect = 2e-34
 Identities = 73/107 (68%), Positives = 86/107 (80%)
 Frame = -2

Query: 324 LFRLMKRRKIYTNGLTVVSILRACGLLRSLATGKELHAQIIKGNVQSNIYIASSLVWLYC 145
           LFR+MKRRKI+ N LTVVSILRACG  R+L  GKE+HAQI+K ++QSNIYI S+LVW YC
Sbjct: 352 LFRVMKRRKIFANNLTVVSILRACGSTRNLLMGKEVHAQIMKNSMQSNIYIGSTLVWFYC 411

Query: 144 KCGEYSTAFNILQDMSFRDVVSWTAMISGCADLGHEYEALGYLKEML 4
           KC E+  A  +LQ+M  RDVVSWTA+ISG   LGHE EAL +LKEML
Sbjct: 412 KCEEHPFASKVLQNMPLRDVVSWTAIISGYTSLGHEPEALEFLKEML 458



 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 40/108 (37%), Positives = 57/108 (52%)
 Frame = -2

Query: 327 RLFRLMKRRKIYTNGLTVVSILRACGLLRSLATGKELHAQIIKGNVQSNIYIASSLVWLY 148
           RLF       +  NG T V +L  C        G+++HA I+K N + N+ + S+LV  Y
Sbjct: 150 RLFDDCIENGVRANGKTFVCVLNLCSKRLDFELGRQIHACIVKDNWR-NLIVDSALVCFY 208

Query: 147 CKCGEYSTAFNILQDMSFRDVVSWTAMISGCADLGHEYEALGYLKEML 4
            +CG+ S AF+    M  RDVV WT MI+ C+  G   EAL    +M+
Sbjct: 209 AQCGDLSGAFHAFDQMPERDVVCWTTMITACSQQGRGTEALSMFSQMM 256



 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 37/94 (39%), Positives = 57/94 (60%)
 Frame = -2

Query: 288 NGLTVVSILRACGLLRSLATGKELHAQIIKGNVQSNIYIASSLVWLYCKCGEYSTAFNIL 109
           N  TV S+L+ACG  ++L  GK+LH  IIK   + +++I +SLV +Y KCGE   +  + 
Sbjct: 263 NEFTVCSVLKACGEEKALEFGKQLHGAIIKKMFKEDVFIGTSLVGMYAKCGEILDSRKVF 322

Query: 108 QDMSFRDVVSWTAMISGCADLGHEYEALGYLKEM 7
             M  R+ V+WT++I+G A  G   EA+   + M
Sbjct: 323 DGMKKRNTVTWTSIIAGYARNGQGEEAISLFRVM 356



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 37/102 (36%), Positives = 54/102 (52%)
 Frame = -2

Query: 312 MKRRKIYTNGLTVVSILRACGLLRSLATGKELHAQIIKGNVQSNIYIASSLVWLYCKCGE 133
           M    +  N  T  S L+AC  L ++  GK +H+ + K    SN+++ S+L+ +Y KCG 
Sbjct: 457 MLEEGVEPNPFTYSSALKACAHLEAILQGKLIHSSVNKTLALSNVFVGSALINMYAKCGY 516

Query: 132 YSTAFNILQDMSFRDVVSWTAMISGCADLGHEYEALGYLKEM 7
            S A  +   M  R++VSW AMI G A  G   EAL  +  M
Sbjct: 517 VSEAIQVFDSMPQRNLVSWKAMIVGYARNGLCGEALKLMYRM 558


>ref|XP_003556682.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g18520-like [Glycine max]
          Length = 773

 Score =  147 bits (372), Expect = 7e-34
 Identities = 68/106 (64%), Positives = 87/106 (82%)
 Frame = -2

Query: 321 FRLMKRRKIYTNGLTVVSILRACGLLRSLATGKELHAQIIKGNVQSNIYIASSLVWLYCK 142
           FRLMK ++I+ N LTV+S+L ACG ++SL  G+E+HAQIIK N+ +NIY+ S+LVW YCK
Sbjct: 528 FRLMKMKRIHVNKLTVLSVLMACGTIKSLLFGREVHAQIIKSNIHTNIYVGSTLVWFYCK 587

Query: 141 CGEYSTAFNILQDMSFRDVVSWTAMISGCADLGHEYEALGYLKEML 4
           C EYS AF +LQ M FRDVVSWTA+ISGCA LG E+EAL +L+EM+
Sbjct: 588 CKEYSYAFKVLQYMPFRDVVSWTAIISGCARLGLEHEALEFLQEMM 633



 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 39/108 (36%), Positives = 61/108 (56%)
 Frame = -2

Query: 327 RLFRLMKRRKIYTNGLTVVSILRACGLLRSLATGKELHAQIIKGNVQSNIYIASSLVWLY 148
           +LF+   +  +  N    V I+  CG    L  GK++HA+I+K   + N+ + +++V  Y
Sbjct: 325 KLFQDCVKHGVPANSKMFVCIMNLCGRRVDLELGKQIHARILKSRWR-NLIVDNAVVHFY 383

Query: 147 CKCGEYSTAFNILQDMSFRDVVSWTAMISGCADLGHEYEALGYLKEML 4
            KCG  S+AF     M+ RDV+ WT MI+ C+  G  +EAL  L +ML
Sbjct: 384 AKCGNISSAFRAFDCMAERDVICWTTMITACSQQGFGHEALSMLSQML 431



 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 37/102 (36%), Positives = 55/102 (53%)
 Frame = -2

Query: 312 MKRRKIYTNGLTVVSILRACGLLRSLATGKELHAQIIKGNVQSNIYIASSLVWLYCKCGE 133
           M    +  N  T  S L+AC  L +   GK +H+   K    SN+++ S+L+++Y KCG 
Sbjct: 632 MMEEGVLPNSYTYSSALKACAELEAPIQGKLIHSYASKTPASSNVFVNSALIYMYSKCGY 691

Query: 132 YSTAFNILQDMSFRDVVSWTAMISGCADLGHEYEALGYLKEM 7
            + AF +  +M  R+VVSW +MI   A  GH  EAL  +  M
Sbjct: 692 VADAFQVFDNMPERNVVSWESMILAYARNGHAREALKLMHRM 733



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 36/96 (37%), Positives = 55/96 (57%)
 Frame = -2

Query: 294 YTNGLTVVSILRACGLLRSLATGKELHAQIIKGNVQSNIYIASSLVWLYCKCGEYSTAFN 115
           Y N  T+ S L+ACG  ++L  G +LH  IIK   +S+++I +SLV +Y KCG    +  
Sbjct: 436 YPNEYTICSALKACGENKALKFGTQLHGAIIKKICKSDVFIGTSLVDMYAKCGVMVDSKV 495

Query: 114 ILQDMSFRDVVSWTAMISGCADLGHEYEALGYLKEM 7
           +   M  R+  +WT++ISG A  G   EA  + + M
Sbjct: 496 VFDRMRIRNTATWTSIISGYARNGFGEEATSFFRLM 531